Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe04g01452 | ATGGAGCTCGCTCTCAGTCTCGGAGACGGTCCTGTCAGACCCTTCTCCTTTCTCAGCAAGACCCCCAAAAGCAACAAGGATTTAGGGTTTTGCATGGGGTTAGGCAGTCGGAGTCGGGTCACTGATGAAGAAGGTAAAGTGGGGGCTGAAAATGGCGGTGAAGCTTCAGATCCATCTCTTCAGCTTCTTCTTCTTCCTTCTGCTCCGGTTCCTCGTCAGATTCGTTTACCTTGGCTTTCCGATCGCTTTATATCTGAACCTGGATCCTCCGACGGCTCAGGAAAGGCTCTAGATGTGAACCGGGTACCGGCGATGACATCTGCTGCAGAAGACGACGACGAAAGGGCCGTTCTATCGTCTCCGAACAGCACCATTTCTTCATTTCCGATGGAGTTTTGCATCGGAAACAGCGGATCGGGAGGAAGAAGCAAGAGGGAGTTAGAAATAGAAACTGAAAGAACAAGCTCTAGAGCGAGTGATGAAGAAGACAACGGGCTGTGCAGAAAAAAGCTCCGGCTGTCTAAAGAACAATCGGCGTTTCTCGAAGAAAGCTTCAAAGAACACAGTACTTTAAATCCAAAACAGAAGCTGGGGTTGGCCAAGCAGCTGAATCTTCGTCCTCGCCAAGTAGAAGTCTGGTTTCAGAACAGAAGAGCAAGGACGAAGCTGAAGCAGACAGAGGTAGATTGCGAATATTTAAAAAGGTGCTGCGAGACATTGACAGAAGAGAACAGAAGATTACAGAAGGAACTGCAAGAGCTTAGAGTCTTGAAAACATCCCACCCTTTCTACATGCAACTTCCGGCCACCACTCTCACCATGTGCCCCTCCTGCGAGCGCGTCGCCACCTCCTCCGCCGCCGCCGCTTCCGGCAGCAACTCCAAACCCGCCATTCACAGCGCCGGAGCTCTCTGCCTTGGGAAGTCCTTGACAATACACCCTTTTTCTCATCAGACCCACCAAGCTGCCTCCTGA | 975 | 51.08 | MELALSLGDGPVRPFSFLSKTPKSNKDLGFCMGLGSRSRVTDEEGKVGAENGGEASDPSLQLLLLPSAPVPRQIRLPWLSDRFISEPGSSDGSGKALDVNRVPAMTSAAEDDDERAVLSSPNSTISSFPMEFCIGNSGSGGRSKRELEIETERTSSRASDEEDNGLCRKKLRLSKEQSAFLEESFKEHSTLNPKQKLGLAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRVLKTSHPFYMQLPATTLTMCPSCERVATSSAAAASGSNSKPAIHSAGALCLGKSLTIHPFSHQTHQAAS | 324 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 21149666 | 21151022 | - | Bpe016171.1 | Bpe04g01452 | 103261 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe04g01452 | 324 | Coils | Coil | 230 | 260 | - | - | |
Bpe04g01452 | 324 | MobiDBLite | consensus disorder prediction | 136 | 164 | - | - | |
Bpe04g01452 | 324 | PANTHER | - | 1 | 301 | - | - | |
Bpe04g01452 | 324 | ProSitePatterns | 'Homeobox' domain signature. | 199 | 222 | IPR017970 | GO:0000981|GO:0006355 | |
Bpe04g01452 | 324 | SMART | HOX_1 | 166 | 228 | IPR001356 | GO:0003677 | |
Bpe04g01452 | 324 | SUPERFAMILY | Homeodomain-like | 168 | 233 | IPR009057 | - | |
Bpe04g01452 | 324 | Pfam | Homeobox associated leucine zipper | 224 | 256 | IPR003106 | GO:0006355|GO:0043565 | |
Bpe04g01452 | 324 | MobiDBLite | consensus disorder prediction | 143 | 164 | - | - | |
Bpe04g01452 | 324 | Gene3D | - | 172 | 222 | - | - | |
Bpe04g01452 | 324 | PANTHER | HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 | 1 | 301 | - | - | |
Bpe04g01452 | 324 | CDD | homeodomain | 168 | 225 | IPR001356 | GO:0003677 | |
Bpe04g01452 | 324 | Pfam | HD-ZIP protein N terminus | 94 | 128 | IPR006712 | GO:0005634 | |
Bpe04g01452 | 324 | Coils | Coil | 144 | 164 | - | - | |
Bpe04g01452 | 324 | Pfam | Homeodomain | 168 | 222 | IPR001356 | GO:0003677 | |
Bpe04g01452 | 324 | ProSiteProfiles | 'Homeobox' domain profile. | 168 | 224 | IPR001356 | GO:0003677 | |
Bpe04g01452 | 324 | SMART | halz | 224 | 267 | IPR003106 | GO:0006355|GO:0043565 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bpe03g01152 | Bpe04g01452 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe02g00472 | Bpe-Chr2:3063647 | Bpe04g01452 | Bpe-Chr4:21149666 | 9.25E-55 | dispersed | |
Bpe02g01981 | Bpe-Chr2:21620980 | Bpe04g01452 | Bpe-Chr4:21149666 | 5.99E-47 | dispersed | |
Bpe04g01452 | Bpe-Chr4:21149666 | Bpe10g00572 | Bpe-Chr10:12688150 | 9.81E-96 | dispersed | |
Bpe11g00083 | Bpe-Chr11:567014 | Bpe04g01452 | Bpe-Chr4:21149666 | 5.40E-51 | dispersed | |
Bpe05g00564 | Bpe-Chr5:19771855 | Bpe04g01452 | Bpe-Chr4:21149666 | 4.29E-76 | transposed | |
Bpe03g01152 | Bpe-Chr3:30572530 | Bpe04g01452 | Bpe-Chr4:21149666 | 2.87E-140 | wgd | |
Bpe04g01452 | Bpe-Chr4:21149666 | Bpe06g00652 | Bpe-Chr6:17223437 | 3.95E-95 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
21339 | PF00046 | Homeodomain | 9.80E-16 | CL0123 | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe04g01452 | K09338 | - | qsu:112028347 | 410.609 |