Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g01452 ATGGAGCTCGCTCTCAGTCTCGGAGACGGTCCTGTCAGACCCTTCTCCTTTCTCAGCAAGACCCCCAAAAGCAACAAGGATTTAGGGTTTTGCATGGGGTTAGGCAGTCGGAGTCGGGTCACTGATGAAGAAGGTAAAGTGGGGGCTGAAAATGGCGGTGAAGCTTCAGATCCATCTCTTCAGCTTCTTCTTCTTCCTTCTGCTCCGGTTCCTCGTCAGATTCGTTTACCTTGGCTTTCCGATCGCTTTATATCTGAACCTGGATCCTCCGACGGCTCAGGAAAGGCTCTAGATGTGAACCGGGTACCGGCGATGACATCTGCTGCAGAAGACGACGACGAAAGGGCCGTTCTATCGTCTCCGAACAGCACCATTTCTTCATTTCCGATGGAGTTTTGCATCGGAAACAGCGGATCGGGAGGAAGAAGCAAGAGGGAGTTAGAAATAGAAACTGAAAGAACAAGCTCTAGAGCGAGTGATGAAGAAGACAACGGGCTGTGCAGAAAAAAGCTCCGGCTGTCTAAAGAACAATCGGCGTTTCTCGAAGAAAGCTTCAAAGAACACAGTACTTTAAATCCAAAACAGAAGCTGGGGTTGGCCAAGCAGCTGAATCTTCGTCCTCGCCAAGTAGAAGTCTGGTTTCAGAACAGAAGAGCAAGGACGAAGCTGAAGCAGACAGAGGTAGATTGCGAATATTTAAAAAGGTGCTGCGAGACATTGACAGAAGAGAACAGAAGATTACAGAAGGAACTGCAAGAGCTTAGAGTCTTGAAAACATCCCACCCTTTCTACATGCAACTTCCGGCCACCACTCTCACCATGTGCCCCTCCTGCGAGCGCGTCGCCACCTCCTCCGCCGCCGCCGCTTCCGGCAGCAACTCCAAACCCGCCATTCACAGCGCCGGAGCTCTCTGCCTTGGGAAGTCCTTGACAATACACCCTTTTTCTCATCAGACCCACCAAGCTGCCTCCTGA 975 51.08 MELALSLGDGPVRPFSFLSKTPKSNKDLGFCMGLGSRSRVTDEEGKVGAENGGEASDPSLQLLLLPSAPVPRQIRLPWLSDRFISEPGSSDGSGKALDVNRVPAMTSAAEDDDERAVLSSPNSTISSFPMEFCIGNSGSGGRSKRELEIETERTSSRASDEEDNGLCRKKLRLSKEQSAFLEESFKEHSTLNPKQKLGLAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRVLKTSHPFYMQLPATTLTMCPSCERVATSSAAAASGSNSKPAIHSAGALCLGKSLTIHPFSHQTHQAAS 324
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 21149666 21151022 - Bpe016171.1 Bpe04g01452 103261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g01452 324 Coils Coil 230 260 - -
Bpe04g01452 324 MobiDBLite consensus disorder prediction 136 164 - -
Bpe04g01452 324 PANTHER - 1 301 - -
Bpe04g01452 324 ProSitePatterns 'Homeobox' domain signature. 199 222 IPR017970 GO:0000981|GO:0006355
Bpe04g01452 324 SMART HOX_1 166 228 IPR001356 GO:0003677
Bpe04g01452 324 SUPERFAMILY Homeodomain-like 168 233 IPR009057 -
Bpe04g01452 324 Pfam Homeobox associated leucine zipper 224 256 IPR003106 GO:0006355|GO:0043565
Bpe04g01452 324 MobiDBLite consensus disorder prediction 143 164 - -
Bpe04g01452 324 Gene3D - 172 222 - -
Bpe04g01452 324 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 1 301 - -
Bpe04g01452 324 CDD homeodomain 168 225 IPR001356 GO:0003677
Bpe04g01452 324 Pfam HD-ZIP protein N terminus 94 128 IPR006712 GO:0005634
Bpe04g01452 324 Coils Coil 144 164 - -
Bpe04g01452 324 Pfam Homeodomain 168 222 IPR001356 GO:0003677
Bpe04g01452 324 ProSiteProfiles 'Homeobox' domain profile. 168 224 IPR001356 GO:0003677
Bpe04g01452 324 SMART halz 224 267 IPR003106 GO:0006355|GO:0043565
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe03g01152 Bpe04g01452 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00472 Bpe-Chr2:3063647 Bpe04g01452 Bpe-Chr4:21149666 9.25E-55 dispersed
Bpe02g01981 Bpe-Chr2:21620980 Bpe04g01452 Bpe-Chr4:21149666 5.99E-47 dispersed
Bpe04g01452 Bpe-Chr4:21149666 Bpe10g00572 Bpe-Chr10:12688150 9.81E-96 dispersed
Bpe11g00083 Bpe-Chr11:567014 Bpe04g01452 Bpe-Chr4:21149666 5.40E-51 dispersed
Bpe05g00564 Bpe-Chr5:19771855 Bpe04g01452 Bpe-Chr4:21149666 4.29E-76 transposed
Bpe03g01152 Bpe-Chr3:30572530 Bpe04g01452 Bpe-Chr4:21149666 2.87E-140 wgd
Bpe04g01452 Bpe-Chr4:21149666 Bpe06g00652 Bpe-Chr6:17223437 3.95E-95 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21339 PF00046 Homeodomain 9.80E-16 CL0123 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g01452 K09338 - qsu:112028347 410.609