Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g01456 ATGGCAGAAACTGAGGATATTCAGCCTCTTGTATGCGACAATGGAACAGGAATGGTCAAGGCTGGATTTGCTGGAGATGATGCTCCAAGGGCTGTATTTCCTAGCATTGTAGGACGTCCTCGTCACACTGGTGTAATGGTTGGCATGGGTCAAAAGGATGCTTATGTTGGTGACGAGGCTCAATCCAAGAGAGGTATTTTGACATTAAAATACCCAATCGAGCATGGTATTGTTAGCAATTGGGATGACATGGAAAAAATTTGGCACCACACATTCTATAATGAGCTTCGTGTGGCTCCGGAAGAGCATCCAGTTCTCCTCACAGAAGCCCCTCTTAACCCCAAGGCTAATCGTGAAAAGATGACACAAATTATGTTTGAGACCTTCAATACTCCGGCAATGTATGTTGCTATCCAGGCCGTCCTTTCCCTTTATGCCAGTGGTCGTACAACTGGTATTGTCCTGGATTCTGGAGATGGTGTCAGCCATACAGTTCCAATATATGAAGGATATGCCCTTCCACATGCCATCCTTCGTTTGGATCTTGCAGGCAGAGATCTCACAGATGCCCTAATGAAAATCTTGACTGAACGTGGTTACTCTTTCACCACCACTGCTGAACGTGAAATTGTAAGGGACGTGAAAGAGAAATTAGCTTACATTGCCCTCGACTATGAACAAGAGCTTGAAACATCAAAAACCAGTTCTTCGGTGGAGAAGAGCTACGAGCTACCAGATGGACAAGTGATCACAATTGGTGCTGAAAGATTCAGATGCCCTGAAGTACTCTTCCAGCCATCGATGATCGGAATGGAAGCTGCTGGCATACACGAAACAACGTACAACTCTATCATGAAGTGTGATGTTGACATTAGGAAGGATCTTTATGGCAACATCGTGCTCAGTGGCGGTTCCACTATGTTCCCTGGTATTGCTGATAGAATGAGCAAGGAGATTACAGCATTAGCTCCCAGTAGCATGAAGATTAAGGTGGTAGCTCCACCAGAGAGGAAGTACAGTGTCTGGATTGGAGGCTCCATTTTAGCTTCTCTCAGCACTTTCCAACAGATGTGGATTTCAAAGGCTGAGTACGATGAGTCTGGGCCGTCGATTGTGCACCGGAAATGCTTCTAA 1134 45.59 MAETEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDVKEKLAYIALDYEQELETSKTSSSVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDESGPSIVHRKCF 377
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 21189952 21191618 + Bpe016175.1 Bpe04g01456 103265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g01456 377 ProSitePatterns Actins and actin-related proteins signature. 106 118 IPR020902 -
Bpe04g01456 377 SMART actin_3 7 377 IPR004000 -
Bpe04g01456 377 Pfam Actin 5 377 IPR004000 -
Bpe04g01456 377 PANTHER ACTIN 3 1 376 - -
Bpe04g01456 377 SUPERFAMILY Actin-like ATPase domain 6 155 IPR043129 -
Bpe04g01456 377 Gene3D - 140 340 - -
Bpe04g01456 377 PANTHER ACTIN 1 376 IPR004000 -
Bpe04g01456 377 SUPERFAMILY Actin-like ATPase domain 149 377 IPR043129 -
Bpe04g01456 377 ProSitePatterns Actins signature 1. 55 65 IPR004001 -
Bpe04g01456 377 Gene3D Actin; Chain A, domain 4 182 273 - -
Bpe04g01456 377 CDD NBD_sugar-kinase_HSP70_actin 10 183 - -
Bpe04g01456 377 Gene3D - 10 371 - -
Bpe04g01456 377 PRINTS Actin signature 51 62 IPR004000 -
Bpe04g01456 377 PRINTS Actin signature 238 254 IPR004000 -
Bpe04g01456 377 PRINTS Actin signature 63 85 IPR004000 -
Bpe04g01456 377 PRINTS Actin signature 142 161 IPR004000 -
Bpe04g01456 377 PRINTS Actin signature 28 37 IPR004000 -
Bpe04g01456 377 PRINTS Actin signature 117 130 IPR004000 -
Bpe04g01456 377 ProSitePatterns Actins signature 2. 358 366 IPR004001 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe03g01148 Bpe04g01456 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00134 Bpe-Chr1:786901 Bpe04g01456 Bpe-Chr4:21189952 0 dispersed
Bpe04g01456 Bpe-Chr4:21189952 Bpe08g00106 Bpe-Chr8:572280 0 dispersed
Bpe01g00753 Bpe-Chr1:6887099 Bpe04g01456 Bpe-Chr4:21189952 8.35E-27 transposed
Bpe03g00540 Bpe-Chr3:25626663 Bpe04g01456 Bpe-Chr4:21189952 8.16E-60 transposed
Bpe03g00737 Bpe-Chr3:27480402 Bpe04g01456 Bpe-Chr4:21189952 5.82E-40 transposed
Bpe06g00278 Bpe-Chr6:13735910 Bpe04g01456 Bpe-Chr4:21189952 0 transposed
Bpe10g00790 Bpe-Chr10:14056292 Bpe04g01456 Bpe-Chr4:21189952 4.63E-72 transposed
Bpe09g00552 Bpe-Chr9:14298660 Bpe04g01456 Bpe-Chr4:21189952 5.58E-104 transposed
Bpe03g01148 Bpe-Chr3:30472524 Bpe04g01456 Bpe-Chr4:21189952 3.62E-164 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g01456 K10355 - fve:101313911 748.043