Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe04g01489 | ATGGCGACGTACTTTCAGGTTAATCCAGATATTCAAGCTTCTGATGGATTACAGACGCTCGTACTTATGAATCCCGGCTATGCACAGTTCTCCGATGCCCTTCCACCGAATCCGACAAACCTTTTGTTCCTCAATTCCCTGGCCGGGAATTCTCTAGCTTCTCAGAATCTCCACCACGCGCCGCCATCTCAATCCCCGCACTTCTCCGGCATGCCTTTGCCCGTTTCCCTTCCCCTTACCTCACAGGACCCTAATTCTCATCCGACGCATCCCCATCATATCTCCGCGTTGCATGGATTTATCCCCGGAGCAAAATTCAATCATTGGAATCCGATCAATTCCTCCACGGACGCGCGTGAATCCCAACGCGCTACCCAAGGGCTTTCCCTCAGCCTTTCCTCTCAGCAGCCTGGTTTTGGGCTCCTCCGAGCCGAACGAGATCCATCATCTCCGTCTCAGCTCGCAGGCGAGGAGATTCGAATCTCCGGCGGGTCATCCTCCATTTCCGGCAACACCAACGGCGGCGTTTCCGGTTTACACGGTGTGTTGCTTTGCTCAAAGTACTTGAAAGCGGCTCAGGAACTTCTAGACGAGGTCGTAAACGTCAGCACCGACGGAATCAAGAACGAGCCCACTAAAAAACCCACCGGGACAAAGATCACCGACGAGTTCTCCGGGACGGCGACCGACGACACCTCAGTCAGAATCGACCCAGCCGGGAAGGACAGTTCAGAGCTCACGACGGCTGAAAGACAGGAAATTCAGATGAAGAAAGCTAAACTTATAAGCATGCTTGACGAGGTGGAGCAAAGATACAGACAATATCATCATCAGATGCAGATAGTAGTATCGTCGTTCGAGCAATCGACCGGAATTGGGTCGGCAAAAACGTACACTTCTCTGGCCCTCGAGACGATTTCAAAGCAATTCCGGTGTTTGAAAGACACGATTTCCGGCCAAATCAAGGCGGCAAACAAGAGTTTAGGGGAAGAAGATTGGGAGGGGGGTAAAATTGGAAGTTCAAGGCTGAAATTTGTGGATCATCAGCTTAGACAGCAGAGAGCACTTCAACAATTGGGAATGATCCAGCAAAATGCTTGGAGACCCCAAAGAGGCCTCCCCGAACGCTCTGTTTCGGTTCTTCGCGCTTGGCTTTTCGAACACTTTCTCCATCCTTATCCAAAAGATTCAGATAAGCAAATGCTGGCCAAGCAAACCGGCCTAACAAGGAGCCAGGTTTCGAATTGGTTTATAAACGCTCGAGTTCGGCTATGGAAGCCTATGGTGGAAGAAATGTACAAGGAGGAAACCAAGGACCAAGAGCAGAATGCCTCTGAGGATAACAGGAGCATGATCAATGAAAATTTTCCTCCCAACTCCATTTCTCCAAGAGAAAAAGCTCCTCCAATCAAAATTCCGGAGGGTCATTCTACAAAGACGGTCTGTAAACCTGCCATTAGAGAAAATATTCAAAACTCGTCTGGATCGAGGCTTCCCGGCTTGTCAAAGCTCGAAGATATCACACATGGATCGAGTCCAAAGAAACAAAAACACTCGGAAATGGCAATGCATTCTTCACTAAATGTAATCTCGTCAATTAACATCGACAGGAAGCAAGCTCAGTCAAACCCGACGAACATTTCAACGAAAGTAGGCAATGAGAAGCAAAGCCGAGACGAATATTCATTCATGATGAACCAAGCTGATTTTGCAGGTGGATTTGGAGAATACCCAATCGAACGAATCGGCCGATACGATGATGGCCAATTCACACCTCGTTTTTCCACCAATGGTGTCTCGCTAACTCTGGGGCTCCCTCACCATAATTTTCTTCCAAACCAATCGATCCACGTCGGAAGACGGATCGAAATCAGCGAACCAAACGAGTTTTCCGGGATGAATTCTTCGACTCCTCATTCTACCACGGCTTTTGACAACATGGAGATTCAAAATAGAAAGCAATTTGTTGCACAATTGTTGCCGGATTTCGTGGTCTGA | 1998 | 48.5 | MATYFQVNPDIQASDGLQTLVLMNPGYAQFSDALPPNPTNLLFLNSLAGNSLASQNLHHAPPSQSPHFSGMPLPVSLPLTSQDPNSHPTHPHHISALHGFIPGAKFNHWNPINSSTDARESQRATQGLSLSLSSQQPGFGLLRAERDPSSPSQLAGEEIRISGGSSSISGNTNGGVSGLHGVLLCSKYLKAAQELLDEVVNVSTDGIKNEPTKKPTGTKITDEFSGTATDDTSVRIDPAGKDSSELTTAERQEIQMKKAKLISMLDEVEQRYRQYHHQMQIVVSSFEQSTGIGSAKTYTSLALETISKQFRCLKDTISGQIKAANKSLGEEDWEGGKIGSSRLKFVDHQLRQQRALQQLGMIQQNAWRPQRGLPERSVSVLRAWLFEHFLHPYPKDSDKQMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYKEETKDQEQNASEDNRSMINENFPPNSISPREKAPPIKIPEGHSTKTVCKPAIRENIQNSSGSRLPGLSKLEDITHGSSPKKQKHSEMAMHSSLNVISSINIDRKQAQSNPTNISTKVGNEKQSRDEYSFMMNQADFAGGFGEYPIERIGRYDDGQFTPRFSTNGVSLTLGLPHHNFLPNQSIHVGRRIEISEPNEFSGMNSSTPHSTTAFDNMEIQNRKQFVAQLLPDFVV | 665 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 21461045 | 21463534 | - | Bpe016211.1 | Bpe04g01489 | 103298 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe04g01489 | 665 | MobiDBLite | consensus disorder prediction | 218 | 232 | - | - | |
Bpe04g01489 | 665 | PANTHER | BEL1-LIKE HOMEODOMAIN PROTEIN 5 | 7 | 630 | - | - | |
Bpe04g01489 | 665 | SUPERFAMILY | Homeodomain-like | 368 | 433 | IPR009057 | - | |
Bpe04g01489 | 665 | ProSiteProfiles | 'Homeobox' domain profile. | 364 | 427 | IPR001356 | GO:0003677 | |
Bpe04g01489 | 665 | MobiDBLite | consensus disorder prediction | 210 | 246 | - | - | |
Bpe04g01489 | 665 | SMART | HOX_1 | 367 | 431 | IPR001356 | GO:0003677 | |
Bpe04g01489 | 665 | MobiDBLite | consensus disorder prediction | 434 | 477 | - | - | |
Bpe04g01489 | 665 | Coils | Coil | 251 | 271 | - | - | |
Bpe04g01489 | 665 | Coils | Coil | 434 | 454 | - | - | |
Bpe04g01489 | 665 | Pfam | Homeobox KN domain | 384 | 423 | IPR008422 | GO:0003677|GO:0006355 | |
Bpe04g01489 | 665 | MobiDBLite | consensus disorder prediction | 489 | 520 | - | - | |
Bpe04g01489 | 665 | Gene3D | - | 370 | 449 | - | - | |
Bpe04g01489 | 665 | PANTHER | HOMEOBOX PROTEIN TRANSCRIPTION FACTORS | 7 | 630 | - | - | |
Bpe04g01489 | 665 | MobiDBLite | consensus disorder prediction | 446 | 460 | - | - | |
Bpe04g01489 | 665 | SMART | prehox3 | 177 | 319 | IPR006563 | - | |
Bpe04g01489 | 665 | Pfam | Associated with HOX | 182 | 318 | IPR006563 | - | |
Bpe04g01489 | 665 | MobiDBLite | consensus disorder prediction | 55 | 94 | - | - | |
Bpe04g01489 | 665 | CDD | homeodomain | 367 | 428 | IPR001356 | GO:0003677 | |
Bpe04g01489 | 665 | MobiDBLite | consensus disorder prediction | 75 | 89 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bpe02g00702 | Bpe04g01489 | CCT | |
Bpe04g01489 | Bpe04g00620 | CCT | |
Bpe03g01193 | Bpe04g01489 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe04g01489 | Bpe-Chr4:21461045 | Bpe11g00665 | Bpe-Chr11:5111635 | 1.06E-80 | dispersed | |
Bpe02g00702 | Bpe-Chr2:4780476 | Bpe04g01489 | Bpe-Chr4:21461045 | 0 | wgd | |
Bpe03g01193 | Bpe-Chr3:30826921 | Bpe04g01489 | Bpe-Chr4:21461045 | 0 | wgd | |
Bpe04g00620 | Bpe-Chr4:3964303 | Bpe04g01489 | Bpe-Chr4:21461045 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
21345 | PF07526 | POX | 6.80E-47 | No_clan | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe04g01489 | - | - | jre:108982860 | 729.939 |