Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g01489 ATGGCGACGTACTTTCAGGTTAATCCAGATATTCAAGCTTCTGATGGATTACAGACGCTCGTACTTATGAATCCCGGCTATGCACAGTTCTCCGATGCCCTTCCACCGAATCCGACAAACCTTTTGTTCCTCAATTCCCTGGCCGGGAATTCTCTAGCTTCTCAGAATCTCCACCACGCGCCGCCATCTCAATCCCCGCACTTCTCCGGCATGCCTTTGCCCGTTTCCCTTCCCCTTACCTCACAGGACCCTAATTCTCATCCGACGCATCCCCATCATATCTCCGCGTTGCATGGATTTATCCCCGGAGCAAAATTCAATCATTGGAATCCGATCAATTCCTCCACGGACGCGCGTGAATCCCAACGCGCTACCCAAGGGCTTTCCCTCAGCCTTTCCTCTCAGCAGCCTGGTTTTGGGCTCCTCCGAGCCGAACGAGATCCATCATCTCCGTCTCAGCTCGCAGGCGAGGAGATTCGAATCTCCGGCGGGTCATCCTCCATTTCCGGCAACACCAACGGCGGCGTTTCCGGTTTACACGGTGTGTTGCTTTGCTCAAAGTACTTGAAAGCGGCTCAGGAACTTCTAGACGAGGTCGTAAACGTCAGCACCGACGGAATCAAGAACGAGCCCACTAAAAAACCCACCGGGACAAAGATCACCGACGAGTTCTCCGGGACGGCGACCGACGACACCTCAGTCAGAATCGACCCAGCCGGGAAGGACAGTTCAGAGCTCACGACGGCTGAAAGACAGGAAATTCAGATGAAGAAAGCTAAACTTATAAGCATGCTTGACGAGGTGGAGCAAAGATACAGACAATATCATCATCAGATGCAGATAGTAGTATCGTCGTTCGAGCAATCGACCGGAATTGGGTCGGCAAAAACGTACACTTCTCTGGCCCTCGAGACGATTTCAAAGCAATTCCGGTGTTTGAAAGACACGATTTCCGGCCAAATCAAGGCGGCAAACAAGAGTTTAGGGGAAGAAGATTGGGAGGGGGGTAAAATTGGAAGTTCAAGGCTGAAATTTGTGGATCATCAGCTTAGACAGCAGAGAGCACTTCAACAATTGGGAATGATCCAGCAAAATGCTTGGAGACCCCAAAGAGGCCTCCCCGAACGCTCTGTTTCGGTTCTTCGCGCTTGGCTTTTCGAACACTTTCTCCATCCTTATCCAAAAGATTCAGATAAGCAAATGCTGGCCAAGCAAACCGGCCTAACAAGGAGCCAGGTTTCGAATTGGTTTATAAACGCTCGAGTTCGGCTATGGAAGCCTATGGTGGAAGAAATGTACAAGGAGGAAACCAAGGACCAAGAGCAGAATGCCTCTGAGGATAACAGGAGCATGATCAATGAAAATTTTCCTCCCAACTCCATTTCTCCAAGAGAAAAAGCTCCTCCAATCAAAATTCCGGAGGGTCATTCTACAAAGACGGTCTGTAAACCTGCCATTAGAGAAAATATTCAAAACTCGTCTGGATCGAGGCTTCCCGGCTTGTCAAAGCTCGAAGATATCACACATGGATCGAGTCCAAAGAAACAAAAACACTCGGAAATGGCAATGCATTCTTCACTAAATGTAATCTCGTCAATTAACATCGACAGGAAGCAAGCTCAGTCAAACCCGACGAACATTTCAACGAAAGTAGGCAATGAGAAGCAAAGCCGAGACGAATATTCATTCATGATGAACCAAGCTGATTTTGCAGGTGGATTTGGAGAATACCCAATCGAACGAATCGGCCGATACGATGATGGCCAATTCACACCTCGTTTTTCCACCAATGGTGTCTCGCTAACTCTGGGGCTCCCTCACCATAATTTTCTTCCAAACCAATCGATCCACGTCGGAAGACGGATCGAAATCAGCGAACCAAACGAGTTTTCCGGGATGAATTCTTCGACTCCTCATTCTACCACGGCTTTTGACAACATGGAGATTCAAAATAGAAAGCAATTTGTTGCACAATTGTTGCCGGATTTCGTGGTCTGA 1998 48.5 MATYFQVNPDIQASDGLQTLVLMNPGYAQFSDALPPNPTNLLFLNSLAGNSLASQNLHHAPPSQSPHFSGMPLPVSLPLTSQDPNSHPTHPHHISALHGFIPGAKFNHWNPINSSTDARESQRATQGLSLSLSSQQPGFGLLRAERDPSSPSQLAGEEIRISGGSSSISGNTNGGVSGLHGVLLCSKYLKAAQELLDEVVNVSTDGIKNEPTKKPTGTKITDEFSGTATDDTSVRIDPAGKDSSELTTAERQEIQMKKAKLISMLDEVEQRYRQYHHQMQIVVSSFEQSTGIGSAKTYTSLALETISKQFRCLKDTISGQIKAANKSLGEEDWEGGKIGSSRLKFVDHQLRQQRALQQLGMIQQNAWRPQRGLPERSVSVLRAWLFEHFLHPYPKDSDKQMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYKEETKDQEQNASEDNRSMINENFPPNSISPREKAPPIKIPEGHSTKTVCKPAIRENIQNSSGSRLPGLSKLEDITHGSSPKKQKHSEMAMHSSLNVISSINIDRKQAQSNPTNISTKVGNEKQSRDEYSFMMNQADFAGGFGEYPIERIGRYDDGQFTPRFSTNGVSLTLGLPHHNFLPNQSIHVGRRIEISEPNEFSGMNSSTPHSTTAFDNMEIQNRKQFVAQLLPDFVV 665
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
4 21461045 21463534 - Bpe016211.1 Bpe04g01489 103298
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g01489 665 MobiDBLite consensus disorder prediction 218 232 - -
Bpe04g01489 665 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 5 7 630 - -
Bpe04g01489 665 SUPERFAMILY Homeodomain-like 368 433 IPR009057 -
Bpe04g01489 665 ProSiteProfiles 'Homeobox' domain profile. 364 427 IPR001356 GO:0003677
Bpe04g01489 665 MobiDBLite consensus disorder prediction 210 246 - -
Bpe04g01489 665 SMART HOX_1 367 431 IPR001356 GO:0003677
Bpe04g01489 665 MobiDBLite consensus disorder prediction 434 477 - -
Bpe04g01489 665 Coils Coil 251 271 - -
Bpe04g01489 665 Coils Coil 434 454 - -
Bpe04g01489 665 Pfam Homeobox KN domain 384 423 IPR008422 GO:0003677|GO:0006355
Bpe04g01489 665 MobiDBLite consensus disorder prediction 489 520 - -
Bpe04g01489 665 Gene3D - 370 449 - -
Bpe04g01489 665 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 7 630 - -
Bpe04g01489 665 MobiDBLite consensus disorder prediction 446 460 - -
Bpe04g01489 665 SMART prehox3 177 319 IPR006563 -
Bpe04g01489 665 Pfam Associated with HOX 182 318 IPR006563 -
Bpe04g01489 665 MobiDBLite consensus disorder prediction 55 94 - -
Bpe04g01489 665 CDD homeodomain 367 428 IPR001356 GO:0003677
Bpe04g01489 665 MobiDBLite consensus disorder prediction 75 89 - -
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Bpe02g00702 Bpe04g01489 CCT
Bpe04g01489 Bpe04g00620 CCT
Bpe03g01193 Bpe04g01489 BCT
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01489 Bpe-Chr4:21461045 Bpe11g00665 Bpe-Chr11:5111635 1.06E-80 dispersed
Bpe02g00702 Bpe-Chr2:4780476 Bpe04g01489 Bpe-Chr4:21461045 0 wgd
Bpe03g01193 Bpe-Chr3:30826921 Bpe04g01489 Bpe-Chr4:21461045 0 wgd
Bpe04g00620 Bpe-Chr4:3964303 Bpe04g01489 Bpe-Chr4:21461045 0 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21345 PF07526 POX 6.80E-47 No_clan Bpe TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g01489 - - jre:108982860 729.939