Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g01510 ATGGAAAACCATACTTCTTCTCAACAATTCAACTCTCAGCTCCATACCCGCCTGAACCAACCTTGGCGGGTTAATAATTTCAACCTCAACAGAAGAAGCAATGTCTTGGAAGAAGAATTCGACGACACAACTGCCGCAGACTGCGGAGAAGACGGCGCGGCCACCGCCTGTCAACGAGAGTGGGAGGAAACGGGGGATAGAGAATCGATGTTCGAAAAGGCACTAACGCCGAGCGATGTCGGCAAACTGAACCGGCTTGTTATTCCGAAACAACACGCCGAGAAATACTTTCCCCTCGGCGGCGCGGGAGACGCCGCCGACAAGGGTTTGCTTCTGAGCTTCGAGGACGAGGCCGGAAAATCGTGGAGGTTCCGTTATTCGTACTGGAACAGTAGCCAAAGCTACGTTCTCACTAAAGGGTGGAGCCGGTACGTTAAAGAGAAGAGGCTGGAATCCGGCGACGTGGTTTTCTTTCAGCGACACCAGACGGACGGCGACCGGCTGTTTATTGGGTGGAGGCGGCGACCGGCGCACGATAGCAGCAGTGGAGTGATGGCGCAGGAATGTGATGGTAACAGTAAGGGAGGAACTGGGGGTTGGACCGGGTTGTTCCATTCTGCGCATCCTTATCCTCAAATTTTTTCCATTTTTCCTGATTCAATTTCTCCGACAGGGTCGGCCTCCGGCCAGAGCCCCGCAGCATCTGCCGGAAACTCGAGGATCCTAAGACTCTTCGGTGTGGACATGGAGTGCCAAACGGACGTCTCCGGCGACCCATCTGCAAGTCCTCGTTTTCTTTCCGATTTGACCCCACCCAATTCTCGATTCTTCCCCCAGCTTTTTTCTTCAAATCCTCCTAATCATATGGTATGA 873 53.26 MENHTSSQQFNSQLHTRLNQPWRVNNFNLNRRSNVLEEEFDDTTAADCGEDGAATACQREWEETGDRESMFEKALTPSDVGKLNRLVIPKQHAEKYFPLGGAGDAADKGLLLSFEDEAGKSWRFRYSYWNSSQSYVLTKGWSRYVKEKRLESGDVVFFQRHQTDGDRLFIGWRRRPAHDSSSGVMAQECDGNSKGGTGGWTGLFHSAHPYPQIFSIFPDSISPTGSASGQSPAASAGNSRILRLFGVDMECQTDVSGDPSASPRFLSDLTPPNSRFFPQLFSSNPPNHMV 290
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 21609092 21610264 + Bpe016231.1 Bpe04g01510 103319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g01510 290 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 20 254 IPR044800 GO:0003700
Bpe04g01510 290 SUPERFAMILY DNA-binding pseudobarrel domain 67 176 IPR015300 -
Bpe04g01510 290 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0156000 20 254 - -
Bpe04g01510 290 Gene3D - 65 183 IPR015300 -
Bpe04g01510 290 ProSiteProfiles B3 DNA-binding domain profile. 71 176 IPR003340 GO:0003677
Bpe04g01510 290 CDD B3_DNA 70 165 IPR003340 GO:0003677
Bpe04g01510 290 SMART B3_2 71 176 IPR003340 GO:0003677
Bpe04g01510 290 Pfam B3 DNA binding domain 71 175 IPR003340 GO:0003677
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01510 Bpe-Chr4:21609092 Bpe08g00913 Bpe-Chr8:11582969 6.21E-51 dispersed
Bpe04g01305 Bpe-Chr4:19439464 Bpe04g01510 Bpe-Chr4:21609092 4.80E-16 transposed
Bpe08g00350 Bpe-Chr8:2094853 Bpe04g01510 Bpe-Chr4:21609092 1.47E-17 transposed
Bpe08g00492 Bpe-Chr8:3216966 Bpe04g01510 Bpe-Chr4:21609092 4.61E-06 transposed
Bpe08g01418 Bpe-Chr8:14981731 Bpe04g01510 Bpe-Chr4:21609092 3.41E-15 transposed
Bpe11g00381 Bpe-Chr11:2890171 Bpe04g01510 Bpe-Chr4:21609092 1.16E-48 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21347 PF02362 B3 1.80E-30 CL0405 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g01510 - - zju:107415017 260.381