Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g01539 ATGAAAAAACACGTCTTCCTGTTTGCTTTCATTCTTCATACTGCATTCCCACTGATCAATGCAGCAAATCAAGATGAAAGAAAGCCATACATTGTGTACATGGGAGACTTGCCTCGAGTTATAGCTTCTGCTGTAAACGACCACCATATATTGCTTTCTAGAGCTGTTGGAGATGAAAGAACAGCAAGAGAATCGCGAATACACAGCTACGGACGGAGCTTCAATGGGTTCGCAGCGAGGATGTTGCCACACGAAGTAGAAATATTATCGAAAGAAGATGGCGTCGTTTCTGTGTTTCCAAGTAGGAAGAGAAAGCTCCATACAACGCGATCATGGGATTTTCTAGGAATGCCGGAAAATTTGCGAAAGCGTAACTTGAGAGTGGAGAGTGATTTGATAGTGGGCATGTTGGATACAGGAATTTACATGGCGGCTCCGAGTTTCAGCGATGAAGGCTATGGACCTCCTCCGGTTAAGTGGAAAGGTTCTTGCGTAACTGGTGCCAACTTCACAGGCTGCAACAACAAGGTGATTGGAGCAAAGTTTTTCAATCTGGAGAGTACGGAAGAGGGAACCGATTTCAGCCCAGCAGACACAGAAGGCCATGGGACACACACGTCCTCCACGGTCGCCGGAATGGTAGTGGAAGGAGCAAGCTTTTACGGCATAGCCGAAGGGACAGCCCGGGGAGGAGTTCCGATGGCTCGTCTGGCGATGTACAAAGTATGCTGGGAAAATGGATGTACAGATATGGACATCTTGGCCGGATTCGATAACGCGATAGCCGATGGGGTCGATTTGATTTCTATCTCCATCGGAGGAGCTTCGAAAGAGTACTTTACTGACTCCATAGCTATTGGATCTTTTCATGCTATGAAGAACGGGATATTGACGTCATGTTCCGGTGGGAATTCCGGCCCTCTGCTGTATTCTGTTGAAAATGTTGCTCCCTGGATGATGAATGTGGCTGCAAGCAGCATTGATAGACAGTTCAACACTATGGTTAAGTTGGGTAATGGCAAGACAATTCCGGGAGTTGCAGCTATAAACACATTTACAGCAGAAGAACAAATGTCTCCTCTGATCAGTGGATCGCAGGCTGGAAATGTCACCGACGATCCTTTCAGAAATTCCAGCACCTGCGATTCCGGGAGTCTATCCGAAGAGAAGGTGAAGGGGAAGATAGTGTTTTGCAATGGAAACTATGGCCAAGATTACACCATTAGAGAGTTGGGAGGAGTAGGAGTTATCACGACAGTTGCAGACGGAGACGAAGACTTTGCTATCACCACTGAAGTTCCTGGAGCTTCTGTCACTGTCAATGGAGGCAACATTATTGCTCAATATATGAAATCTACCAAGAACCCAAGAGCTGTAATATACAAAACCGTAGATACCAAAGCTGAAGCTCCTTTCTTGGCTTCATTCTCCTCCAGAGGTCCTCAAATTGTCACCCCAAACATCCTCAAGCCGGATATTGCAGCGCCGGGGATAGACATACTAGCAGCCTATTCAAAATTGGCGTCAGTGACGGATGATCCGAGTGATAAGAGGTACAGTGTTTTCAATATCATATCTGGAACTTCCATGGCTTGTCCTCATGCAACTGCCGCAGCCGCCTACGTTAAGTCCTTCCACCCTGACTGGTCGCCGGCCGCCATCAAATCGGCCATTATGACCACTGCCAGTCAAGTGAAATTCAAAGAAGACTCCGACTCACTCGGCGCCGGTGCCGGGCAGTTAAACCCGGCGGGCGCGGTCCACCCAGGGCTCGTCTACGACCTTTCAATGATGTCCTACATTCGTCTCCTCTGCAAACAAGGCTACGACACCACCACCATTAACCTTCTCGTCGGAGGAACCAAGCTCTACAACTGCTCAAAACTGAAGCACGCTCTCGGCATCGACGGCCTCAACTACCCCACCTTCCACGCCCAGATCTCAGCCAACAGCACGGAGGTCTCCGCCGTCTTCCACCGGACGGTCACCCATGTGGGTTTCGGCGGATCGATGTACAAATCCAAGGTGACGACGCCGGCGGGCTTGTCTGTCGAGGTTATCCCTGAAACTCTGGAATTCGGACGCACCCATGAAAAGAAATCGTTTAAGATGGTCTTGAAAGGTTCGATTCCGAACGGAACACAGACTTTGTCTGGTTCGCTGGAGTGGAATGACCATAAACACAGTGTTAGAAGCACCATTCTCATCTACAGAGGAGCGCCGGCGAATTATTAG 2235 48.9 MKKHVFLFAFILHTAFPLINAANQDERKPYIVYMGDLPRVIASAVNDHHILLSRAVGDERTARESRIHSYGRSFNGFAARMLPHEVEILSKEDGVVSVFPSRKRKLHTTRSWDFLGMPENLRKRNLRVESDLIVGMLDTGIYMAAPSFSDEGYGPPPVKWKGSCVTGANFTGCNNKVIGAKFFNLESTEEGTDFSPADTEGHGTHTSSTVAGMVVEGASFYGIAEGTARGGVPMARLAMYKVCWENGCTDMDILAGFDNAIADGVDLISISIGGASKEYFTDSIAIGSFHAMKNGILTSCSGGNSGPLLYSVENVAPWMMNVAASSIDRQFNTMVKLGNGKTIPGVAAINTFTAEEQMSPLISGSQAGNVTDDPFRNSSTCDSGSLSEEKVKGKIVFCNGNYGQDYTIRELGGVGVITTVADGDEDFAITTEVPGASVTVNGGNIIAQYMKSTKNPRAVIYKTVDTKAEAPFLASFSSRGPQIVTPNILKPDIAAPGIDILAAYSKLASVTDDPSDKRYSVFNIISGTSMACPHATAAAAYVKSFHPDWSPAAIKSAIMTTASQVKFKEDSDSLGAGAGQLNPAGAVHPGLVYDLSMMSYIRLLCKQGYDTTTINLLVGGTKLYNCSKLKHALGIDGLNYPTFHAQISANSTEVSAVFHRTVTHVGFGGSMYKSKVTTPAGLSVEVIPETLEFGRTHEKKSFKMVLKGSIPNGTQTLSGSLEWNDHKHSVRSTILIYRGAPANY 744
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 21744079 21748058 + Bpe016259.1 Bpe04g01539 103348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g01539 744 Pfam Fibronectin type-III domain 638 736 IPR041469 -
Bpe04g01539 744 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 16 107 IPR037045 -
Bpe04g01539 744 Pfam Subtilase family 130 577 IPR000209 GO:0006508|GO:0008236
Bpe04g01539 744 CDD PA_subtilisin_like 335 460 - -
Bpe04g01539 744 ProSiteProfiles Serine proteases, subtilase domain profile. 111 587 - -
Bpe04g01539 744 Pfam Peptidase inhibitor I9 30 107 IPR010259 -
Bpe04g01539 744 SUPERFAMILY Subtilisin-like 129 587 IPR036852 GO:0004252|GO:0006508
Bpe04g01539 744 PRINTS Subtilisin serine protease family (S8) signature 526 542 IPR015500 -
Bpe04g01539 744 PRINTS Subtilisin serine protease family (S8) signature 129 148 IPR015500 -
Bpe04g01539 744 PRINTS Subtilisin serine protease family (S8) signature 198 211 IPR015500 -
Bpe04g01539 744 CDD Peptidases_S8_3 105 563 IPR034197 -
Bpe04g01539 744 ProSitePatterns Serine proteases, subtilase family, serine active site. 527 537 IPR023828 -
Bpe04g01539 744 Gene3D - 604 738 - -
Bpe04g01539 744 PANTHER CUCUMISIN PROTEIN 19 738 - -
Bpe04g01539 744 Gene3D Peptidase S8/S53 domain 131 600 IPR036852 GO:0004252|GO:0006508
Bpe04g01539 744 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 19 738 IPR045051 -
Bpe04g01539 744 Gene3D - 328 466 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00758 Bpe-Chr2:5357232 Bpe04g01539 Bpe-Chr4:21744079 0 dispersed
Bpe04g01539 Bpe-Chr4:21744079 Bpe08g01470 Bpe-Chr8:15412701 1.09E-55 dispersed
Bpe04g01539 Bpe-Chr4:21744079 Bpe11g00692 Bpe-Chr11:5329393 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g01539 - - jre:109005335 932.169