Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g01547 ATGCTCTTAATATTCTTGACGGAAATGCTCGGAGTGAGATCGAACTACACGCTTTTAACTCAAATTCCAGATGACGAGTTTGGCGGCGGAGCTTCTGTGGTTGGGTCTGGAGTTCAGGCGGCGTTTTACGAGTCATTGTCGGGCGAGGGTAAGAATAATAAGGGAAAGGCAGAGAGAGGGTTCGATTGGGATGGGAGTGGTGATCATAGGGTGAACCAACCGGGGAATTGGATCGGGAACTTGTATTCGTCAATCGGGTTGCAGAGGCAGTCCAGCGGGAGCAGCTTCGGAGAGAGCTCTCGCTCGGGGGATTATTATGCACCAACTCTGTCTACTGCTGCGGGTAACGAGATCGATAGCTTTGGATATATGCAGGACGATGTAATCAGAGTTGGAGGCGGAGGTGTGGGGGATGAATTAAGGGCAAAAGCAGTGGAGCCGGCTGTTGGAACGGGAGAGTCATCAGGTAAGAGCTGGGCGCAGCAGACCGAGGAGAGTTATCAGTTACAGTTAACCTTAGCTCTTCGTATTTCATCGGATGCGACTTGTGCCGATGATCCCAACTTCTTGGATCCAGTACCAGATGAATTGTCCGTAAAGTTTTCGTCAAGTTCGGCTGAGGTTCTGTCACATCGATTTTGGGTAAATGGATGCCTGTCGTATTCTGACAAAATTCCGGATGGATTTTACCAAATTTGTGGGATGGATCCACATGTATGGTCAGTATGCACCAACCTGCAAGAAAATGACCTTATACCATCTGTCGAATCCTTGAGAACTGTTGATCCAAGTATGGATTCTTCAATTGAAGTGGTTTTGATTGATAGACATAGTGATCCAAGGTTAAATGAACTCCAAAATCGGGTACATAGTATTTCGTGCAGCTCTAGAACTACAATAGATGTTGTAGATCAGTTAGCAAAGCTCGTATGCAATTGCATGGGTGGATCAGCTTCAGCAGGGGAGGATGATATAGTATCCAATTGGAGAGAACTCAGTATCAATCTAACACAGTGTTTGCGATCAATTGTTGTTCTTATCGGTAGTCTATCAATTGGTTTTTGCAGACATCGTGCTCTTTTATTTAAAGTGCTAGCCGATGCAATAGATTTACCATGTCGAATTGCTAAGGGTTGTAAGTATTGCACAAGAGGAGATGCTTCCTCTTGTGTTGTTCGATTTGGGCTTGAGAGAGAGTATCTGGTTGATTTGATTGGCAAGCCTGGCTGCTTATGCGTGCCGGATTCTCTGCTTAATGGTCCATCATCCATATCAATTTCTTCTCCATTGCGCTTTCCACCTCTAAAACCATTTGAGCCCACTACTCATTTTCGGTTGCTTGCAAAACAGTATTTCTTGGATTGTCCATCACTTAACATCGAATTTGATGAAACTTCTGCAGGTGACACCGAGGAAAATTCTCAAATGCTGCAGCCGAAAGCTTCACAGCTTACTTCCCAAGATAGAGAGTTTTGTCCATTTCAATCATGTGATACTTCTCATGATGTTACACAGACAACATCCTTGTTCAAAGATCCAATCCCTGAAAAGCATGTCCCACAGTTCATTCACAGGGAGGTCCCACCATTTTTGGCAGTTTCTCATACCAGGATGGGTTCTACAAGAAATTCCAGGTTTAATGAGGGAGGTGGACTTTTTCCTAGCAAAGCTAGTCAAGAAATTGCCCTTGATGTAGAAGATTTGGACATTCCGTGGGGCGACCTTGTTTTAAAAGAGAACATTGGATCTGGTTCTTTTGGAACTGTCCATCTAGCAGATTGGCATGGCTCGGATGTGGCTGTGAAGATTCTTATGGAGCAAGATTTTCATGCTGAGCGTTTCAAAGAATTTTTGAGGGAGGTTGCAATAATGAAACGCCTTCGGCATCCCAACATTGTTCTGTTTATGGGTGCAGTGACTCAACCCCCAAATTTGTCCATAGTCACTGAATATCTATCAAGAGGTAGCTTGTATAGACTATTGCACAAACCGGGAGCCAGAGAAGTTTTAGACGAGAAATGCAGATTAACTATGGCTTATGATGTGGCCAAAGGTATGAATTATCTTCATAGGCGTAATCCTCCCATTGTTCATCGTGATTTAAAATCTCCAAATCTTTTGGTTGACAAGAAGTATACGGTGAAGGTTGGTGATTTTGGCCTTTCTCGGTTAAAGGCAAATACATTTCTTTCATCAAAGTCAGCTGCTGGCACTCCGGAGTGGATGGCACCTGAAGTTCTACGTGATGAGCCATCAAATGAGAACTCAGATGTTTACAGCTTTGGTGTGATCTTGTGGGAGCTTGCTACAATGCAACGGCCATGGAATAATTTAAACCCAGCACAGGTTATAGCGGCTGTTGGCTTTAAGGGAAAAAGGCTAGAAATACCACGAGGTTTAAATTCTAAAGTGGCTTCCTTAATTGAGGCTTGCTGGGCAAACGAGCCCTGGAAACGGCCATCTTTTTTAACTATAATGGATACCTTGAAGCCATTGACCAAGCCTACTATGCCGCAACCAGGCCATATAAACGTGCTATCAGTTCTATGA 2550 44.08 MLLIFLTEMLGVRSNYTLLTQIPDDEFGGGASVVGSGVQAAFYESLSGEGKNNKGKAERGFDWDGSGDHRVNQPGNWIGNLYSSIGLQRQSSGSSFGESSRSGDYYAPTLSTAAGNEIDSFGYMQDDVIRVGGGGVGDELRAKAVEPAVGTGESSGKSWAQQTEESYQLQLTLALRISSDATCADDPNFLDPVPDELSVKFSSSSAEVLSHRFWVNGCLSYSDKIPDGFYQICGMDPHVWSVCTNLQENDLIPSVESLRTVDPSMDSSIEVVLIDRHSDPRLNELQNRVHSISCSSRTTIDVVDQLAKLVCNCMGGSASAGEDDIVSNWRELSINLTQCLRSIVVLIGSLSIGFCRHRALLFKVLADAIDLPCRIAKGCKYCTRGDASSCVVRFGLEREYLVDLIGKPGCLCVPDSLLNGPSSISISSPLRFPPLKPFEPTTHFRLLAKQYFLDCPSLNIEFDETSAGDTEENSQMLQPKASQLTSQDREFCPFQSCDTSHDVTQTTSLFKDPIPEKHVPQFIHREVPPFLAVSHTRMGSTRNSRFNEGGGLFPSKASQEIALDVEDLDIPWGDLVLKENIGSGSFGTVHLADWHGSDVAVKILMEQDFHAERFKEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKPGAREVLDEKCRLTMAYDVAKGMNYLHRRNPPIVHRDLKSPNLLVDKKYTVKVGDFGLSRLKANTFLSSKSAAGTPEWMAPEVLRDEPSNENSDVYSFGVILWELATMQRPWNNLNPAQVIAAVGFKGKRLEIPRGLNSKVASLIEACWANEPWKRPSFLTIMDTLKPLTKPTMPQPGHINVLSVL 849
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 21824958 21837832 - Bpe016268.1 Bpe04g01547 103356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g01547 849 CDD STKc_MAP3K-like 581 829 - -
Bpe04g01547 849 SMART serkin_6 575 833 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe04g01547 849 ProSitePatterns Protein kinases ATP-binding region signature. 581 602 IPR017441 GO:0005524
Bpe04g01547 849 Gene3D Transferase(Phosphotransferase) domain 1 654 841 - -
Bpe04g01547 849 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 147 842 - -
Bpe04g01547 849 SUPERFAMILY Protein kinase-like (PK-like) 560 828 IPR011009 -
Bpe04g01547 849 ProSiteProfiles Protein kinase domain profile. 575 833 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe04g01547 849 PRINTS Tyrosine kinase catalytic domain signature 756 778 IPR001245 GO:0004672|GO:0006468
Bpe04g01547 849 PRINTS Tyrosine kinase catalytic domain signature 649 662 IPR001245 GO:0004672|GO:0006468
Bpe04g01547 849 PRINTS Tyrosine kinase catalytic domain signature 690 708 IPR001245 GO:0004672|GO:0006468
Bpe04g01547 849 PRINTS Tyrosine kinase catalytic domain signature 737 747 IPR001245 GO:0004672|GO:0006468
Bpe04g01547 849 PRINTS Tyrosine kinase catalytic domain signature 800 822 IPR001245 GO:0004672|GO:0006468
Bpe04g01547 849 Gene3D Phosphorylase Kinase; domain 1 568 653 - -
Bpe04g01547 849 ProSitePatterns Serine/Threonine protein kinases active-site signature. 696 708 IPR008271 GO:0004672|GO:0006468
Bpe04g01547 849 Pfam Protein tyrosine and serine/threonine kinase 576 829 IPR001245 GO:0004672|GO:0006468
Bpe04g01547 849 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 147 842 - -
Bpe04g01547 849 Pfam Ethylene-responsive protein kinase Le-CTR1 206 412 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00415 Bpe-Chr4:2673349 Bpe04g01547 Bpe-Chr4:21824958 1.73E-67 dispersed
Bpe04g01547 Bpe-Chr4:21824958 Bpe13g00378 Bpe-Chr13:11520049 2.58E-38 dispersed
Bpe04g01547 Bpe-Chr4:21824958 Bpe02g00143 Bpe-Chr2:987745 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63330 PF07714 PK_Tyr_Ser-Thr 1.00E-68 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g01547 K14510 - zju:107432147 1182.93