Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g01553 ATGCATTCCAGTAACTTGCTTCTTGAGGAGCCCATTAGGATGGCTTCGATACTGGAGCCATCCAAGGCGGGGTTCTTTCCTGCGATGACGAAGATAGTGGGGACTCTGGGTCCGAGGTCTCGATCCGTTGAGGTTATTACCGGCTGTCTCAGAGCAGGAATGTCCGTGGCTCGGTTTGACTTTTCATGGGGTAGCCCGGAATATCATCAGGAGACTTTGGAGAATCTGAAGTCTGCTGTTAAATGCTCTAACAAGCTTTGTGCTGTTATGCTGGACACTGTCGGTCCGGAGTTGCAGGTTGTGAATAAAAGTGAGAAATCTATCTCACTTCAAGCAGATGGGATCGTTGTGTTGACCCCCAATCAAGAACTTGAGGCCTCTTCAGAGATTTTGCCTATCAATTTTAATGGACTTTCTAAGGCTGTGAAGAAGGGTGACACCATTTTTGTTGGTCAATACCTATTCACTGGAAGTGAAACTACCTCTGTCTGGCTGGAGGTTTCTAAAGTGGACGGTGAGGATGTCGTTTGTGTGATAAAGAATACAACCACATTGGTTGGATCACTGTTTACCTTGCACGCCTCTCAAGTTCGTATCGATCTGCCAACATTCTCCGATAAAGATAAGGAGGTAACAAGTACTTGGGGATCTCAAAACAAAATTGATTTCCTATCTTTGTCATACACCCGACACGCCGAGGATGTTCGACAAGTAAGTAGAAAAGAAATTTATGCATTTGCTAAATGTAATTGTTCGAGTCAAACAATGGTTGAGTATCTTGTAATGCAGGCCCGGGAATTCCTTTCAAAGTGTGGGGACCTTAGCCAAACTCAAATTCTTGCCAAAATTGAAAACATAGAGGGATTGACTCACTTTGATGAAATTCTTCAAGAAGCCGATGGCATTATATTGTCCAGAGGGAATTTGGGAATAGATCTTCCACCTGAGAAGGTGTTCTTGTTTCAGAAGGCTGCCCTTTTCAAATGTAACATGGCTGGAAAGCCGGCTATAGTTACTCGTGTTGTGGACAGCATGACTGCAAATTTAAGACCTACTCGTGCCGAAGCCACTGATGTTGCGAATGCCGTACTAGACGGGAGTGATGCCATTCTTCTTGGCGCCGAGACTTTGCGCGGGTTATACCCTGTCGAGACTATTTCCATAGTCGGTAGAATCTGTGCTGAGGCAGAGAACGTTTTCAATCAAGACCTCTACTTCAAAAAGACGTCCAAATACGTTGGCGAACCGATGTCACACCTGGAATCAATCACATCGTCAGCGGTGAGAACAGCTATTAAGGTGAAGGCGTCTTTGATTATTTGCTTCACGTCATCAGGACAGACTGCAAGATTGATCGCCAAGTATAGACCAACTATGCCAGTAATCTCGGTAGTTATACCTCGGCTTAAGACGAATCGAATCAAGTGGAGCTTCAGTGGAGCATTTGAGGCAAGACAATCACTAATAGTTAGAGGTCTCTTTCCCATGTTTGCCGATCCCTGCCAACCTGCGGAATCCATTGGGGCAACAAACGAATCGGTCCTTAAGGTGGCGCTTGCTCATGGGAAAGATTCGGGAGTTGTAAAACCGCACGATCGAATTGTCGTGTGCCAAAAAGTCGGGGATTCATCTGTGGTTGAGGTTATTGAACTCGAGGGTTAA 1662 45.43 MHSSNLLLEEPIRMASILEPSKAGFFPAMTKIVGTLGPRSRSVEVITGCLRAGMSVARFDFSWGSPEYHQETLENLKSAVKCSNKLCAVMLDTVGPELQVVNKSEKSISLQADGIVVLTPNQELEASSEILPINFNGLSKAVKKGDTIFVGQYLFTGSETTSVWLEVSKVDGEDVVCVIKNTTTLVGSLFTLHASQVRIDLPTFSDKDKEVTSTWGSQNKIDFLSLSYTRHAEDVRQVSRKEIYAFAKCNCSSQTMVEYLVMQAREFLSKCGDLSQTQILAKIENIEGLTHFDEILQEADGIILSRGNLGIDLPPEKVFLFQKAALFKCNMAGKPAIVTRVVDSMTANLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGRICAEAENVFNQDLYFKKTSKYVGEPMSHLESITSSAVRTAIKVKASLIICFTSSGQTARLIAKYRPTMPVISVVIPRLKTNRIKWSFSGAFEARQSLIVRGLFPMFADPCQPAESIGATNESVLKVALAHGKDSGVVKPHDRIVVCQKVGDSSVVEVIELEG 553
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 21871475 21876735 + Bpe016274.1 Bpe04g01553 103362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g01553 553 PANTHER PYRUVATE KINASE 261 552 - -
Bpe04g01553 553 PANTHER PYRUVATE KINASE 2 239 - -
Bpe04g01553 553 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 9 401 IPR015813 GO:0003824
Bpe04g01553 553 SUPERFAMILY PK C-terminal domain-like 384 540 IPR036918 -
Bpe04g01553 553 PANTHER PYRUVATE KINASE 261 552 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Bpe04g01553 553 PANTHER PYRUVATE KINASE 2 239 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Bpe04g01553 553 Gene3D - 97 201 IPR015806 GO:0004743|GO:0006096
Bpe04g01553 553 Gene3D - 389 551 IPR036918 -
Bpe04g01553 553 Pfam Pyruvate kinase, alpha/beta domain 421 541 IPR015795 -
Bpe04g01553 553 Pfam Pyruvate kinase, barrel domain 30 239 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Bpe04g01553 553 Pfam Pyruvate kinase, barrel domain 261 401 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Bpe04g01553 553 Gene3D - 30 388 IPR040442 -
Bpe04g01553 553 PRINTS Pyruvate kinase family signature 85 101 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Bpe04g01553 553 PRINTS Pyruvate kinase family signature 221 235 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Bpe04g01553 553 SUPERFAMILY PK beta-barrel domain-like 96 186 IPR011037 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g00746 Bpe04g01553 CCT
Bpe02g00746 Bpe04g01553 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00746 Bpe-Chr2:5195501 Bpe04g01553 Bpe-Chr4:21871475 0 dispersed
Bpe04g00661 Bpe-Chr4:4160966 Bpe04g01553 Bpe-Chr4:21871475 0 dispersed
Bpe04g01553 Bpe-Chr4:21871475 Bpe15g01034 Bpe-Chr15:19729603 0 dispersed
Bpe11g00349 Bpe-Chr11:2539029 Bpe04g01553 Bpe-Chr4:21871475 6.11E-41 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g01553 K00873 - rcu:8274900 895.19