Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g01554 ATGGAGACCAACGCCGTCGATAATGGAGTTTTCACCGGCATTGGTTCTGGATTTCTAGGACTGGAAATGTCACTTCACCAATCGCAAAACCCTTCAAAACCTCAAAAACCACATCAATTACAACCCCCCCAGATCGTTTCCTACGCCCATCAAGAGCCTCGCCAATCGATCAAGTTTTCATATGCACCCACAGGCGCGCAGCAGGCGCAGGCGGTGGCGCCCAGCGACGAAGACGAGCCAGGGTTCACGGCGGACGACGGCGCCGGCGATGGAAAGAAGAAAATCTCGCCGTGGCAGCGGATGAAGTGGACGGACACGATGGTGAGGCTTCTAATAATGGCTGTTTTCTACATCGGCGACGAAGGTGGGTTCGAAACTACCGATTCCGCGGCCAAAAAAAAGTCGTCTGGGATTCTTCAGAAGAAGGGGAAATGGAAATCGGTTTCTCGAGCTATGCTGGAGAAAGGGTTTTACGTTTCTCCTCAGCAATGCGAGGATAAATTCAACGATTTGAACAAAAGGTACAAAAGGGTAAACGATATTCTTGGAAAAGGAACTGCCTGTAAAGTTGTGGAGAATCAGGGATTGTTGGAAGCCATGGATTTATCTCCAAAAAGGAAGGAAGAGGTGAAGAAATTGCTGAATTCTAAGCATCTTTTCTTCAGAGAAATGTGTGCTTATCACAATAGTTGCAGTCACAGCAATGGAAACGCAAGTTCAGGAGTTCATTGCTCTCCAGAAATGGCGGCCGAGCCATCAAATGCTCACCAACAGCAATTACCACACCAACGATGCTTTCACTCGTCGGAAAACGCATCGGAAATGGCTAATCTGTGTAAAGACGAAGCTGAGCGGTTTAAAATGATGGAAGACGAATATGACGAGGAAGATGAAGAATCAGACTCAGGAGACGAAGACGAAGCAGAAAACGAGGATGTAATTGAAGAAGACGATGAAAACGACGACAGAGCTTCACACAAGAGGCGAAGAAAGGGCTTCTCTGCATCTTCTTCGTCTTCCCTGCAAATACAGCTGTTGAACAGCGAAATAATGGGTCTGAACCAGGACGTTTTAAAGACGCCATGGGAGAAGCTGCTCTGGATAAAAAGCAAACTGCTGGAATTAGAGGAGCAGAAAGTTGGCTGCTTAATTCAAGCTTTTGAGCTGGAGAAACAGAGGCTGAAATGGGTTAAATTCAGCATTAAAAAGGAGAGAGAAATGGAGAGAGGGAGGCTGGATAACGAGAGAAGCAAGCTTCAGACTGAAAAAATGGCGTTGCTTCTGAGGAAGAAGGAGATGGAATTAACCGATCTTCATCAACAACGTCAGCAGCATTCTTCCAGCAAAAGGGGTGACCCATCTTCCATAACTGGATAA 1377 46.7 METNAVDNGVFTGIGSGFLGLEMSLHQSQNPSKPQKPHQLQPPQIVSYAHQEPRQSIKFSYAPTGAQQAQAVAPSDEDEPGFTADDGAGDGKKKISPWQRMKWTDTMVRLLIMAVFYIGDEGGFETTDSAAKKKSSGILQKKGKWKSVSRAMLEKGFYVSPQQCEDKFNDLNKRYKRVNDILGKGTACKVVENQGLLEAMDLSPKRKEEVKKLLNSKHLFFREMCAYHNSCSHSNGNASSGVHCSPEMAAEPSNAHQQQLPHQRCFHSSENASEMANLCKDEAERFKMMEDEYDEEDEESDSGDEDEAENEDVIEEDDENDDRASHKRRRKGFSASSSSSLQIQLLNSEIMGLNQDVLKTPWEKLLWIKSKLLELEEQKVGCLIQAFELEKQRLKWVKFSIKKEREMERGRLDNERSKLQTEKMALLLRKKEMELTDLHQQRQQHSSSKRGDPSSITG 458
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 21877187 21878563 - Bpe016275.1 Bpe04g01554 103363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g01554 458 PANTHER F16F4.11 PROTEIN-RELATED 1 455 - -
Bpe04g01554 458 MobiDBLite consensus disorder prediction 435 458 - -
Bpe04g01554 458 MobiDBLite consensus disorder prediction 24 45 - -
Bpe04g01554 458 MobiDBLite consensus disorder prediction 291 319 - -
Bpe04g01554 458 MobiDBLite consensus disorder prediction 291 333 - -
Bpe04g01554 458 Gene3D - 103 177 - -
Bpe04g01554 458 Coils Coil 279 299 - -
Bpe04g01554 458 MobiDBLite consensus disorder prediction 63 94 - -
Bpe04g01554 458 Pfam Myb/SANT-like DNA-binding domain 100 226 IPR044822 -
Bpe04g01554 458 PANTHER SEQUENCE-SPECIFIC DNA BINDING TRANSCRIPTION FACTOR 1 455 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00349 Bpe-Chr4:2220605 Bpe04g01554 Bpe-Chr4:21877187 2.36E-55 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21350 PF13837 Myb_DNA-bind_4 1.70E-21 CL0123 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g01554 - - palz:118048196 498.434