Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe04g01570 | ATGTCACAAGATTCTGAGGAGATAAAGACGATTGAGCAGTGGAAATGGTCCGAAATGCAAGGGCTGGAACTCGTTTCTTCATCAACTCCGACTGACAACCCTGAGGATCAACGACGCGAGGAGGGTGCGGAGAAGGCGAAAGGAGGAGAAATGGAGAACCGGGAACCGAAGGTAGACGGCGGCGTAGGTGGCAGCGGAGAGAAACCGGAGACCGTTCCGGTAGTTGGGTTTGGAGAACTCTTCAGATTCGCCGACGGTTTAGATTACTTTTTGATGGCACTTGGTTCTGCCGGAGCCGTCGTTCACGGTTGTTCTTTGCCTCTGTTTCTCCGGTTCTTTGCCGATCTTGTCAACTCTTTTGGGTCGAATGCTAACAATCTGGACAAGATGACGCAGGAAGTTTTGAAGTATGCATTTTACTTTCTGGTCGTCGGAGCTGCCATATGGGCGTCTTCCTGGGCAGAGATTTCATGTTGGATGTGGACTGGAGAGAGGCAATCGACGAAGATGAGGATCAAATACCTCGAAGCTGCGTTAAACCAAGACATTCAGTTCTTCGACACAGAAGTTCGAACCTCCGATGTTGTTTCCGCCATTAATACCGACGCAGTGATGGTCCAAGACGCCATTAGCGAGAAGTTGGGTAATTTTATTCACTATATGGCAACTTTTGTGTCTGGTTTTGTGGTGGGTTTTACTGCTGCTTGGCAATTAGCCTTGGTCACTCTGGCCGTAGTTCCTCTCATCGCCGTAATCGGTGCTATCCACGCCACCACATTAGCCAAGCTCTCCGCCAAGAGCCAAGAGGCTCTTTCTCAAGCCGGAAACATCGTAGAACAGACAATAGTTCAAGTTCGGGTCGTTTTGGCGTTCGTCGGAGAATCAAGAGCCTTACAAAGTTACTCGGCTGCTCTCAAGGTTTCTCAGAGACTAGGCTACAGAAGTGGATTTGCAAAAGGGTTGGGTCTTGGCGCGACTTACTTTGTCGTCTTCTGCTGCTACGCCCTTCTTCTCTGGTACGGCGGCTATCTGGTCAGGCACCACCACACCAACGGCGGCCTAGCCATAGCCACCATGTTTTCCGTCATGATAGGTGGACTGGCTTTAGGCCAATCCATTCCAAGCATGACTGCATTTGCCAAAGCAAAAGTTGCAGCTGCTAAAATTCTTCGCATAATCGATCACAAACCGGCAGTCGATCGAAACAGCAAATCTGGTTTGGAATTAGAATCTGTAACAGGACTAGTCGAGCTAAAAAATGTAGATTTCTCATATCCATCAAGACCAGACGTACGAATACTTAACAACTTCTCCCTCAACATTCCGGCTGGCAAGACCATAGCTTTGGTCGGTAGCAGCGGATCGGGGAAGAGCACTGTAGTCTCACTTATTGAAAGATTTTACGACCCGATTTCAGGATGTGTTCTTCTCGACGGGCACGATATAAAGACGTTAAAGCTTAGATGGCTGAGGCAGCAAATAGGGTTGGTCAGTCAAGAGCCGGCTCTGTTTGCGACAACCATTAAAGAGAATATACTCTTGGGAAGGCCCGAGGCAAACCAGCTTGAGGTAGAAGAAGCTGCAAGAGTTGCTAATGCCCATTCTTTCATCATCAAACTTCCTGATGGCTATGATACTCAGGTGGGGGAGAGAGGCTTGCAGCTTTCCGGAGGGCAGAAGCAGAGAATCGCAATAGCCCGGGCGATGCTGAAAAACCCTGCTATCTTGCTCTTAGACGAGGCGACCAGTGCCCTTGACTCCGAATCGGAAAAGCTCGTTCAAGAGGCCCTCGATCGGTTCATGATCGGGAGGACAAGTCTCGTGATTGCCCATCGCCTCTCGACCATTCGCAAAGCCGATCTCGTTGCCGTTATCCAACAAGGAAGCGTCTCTGAAATCGGGACCCATGATGAGCTCATCGACAGAGGAGAAAACAGCATCTACGCCAAACTCATCCGAATGCAGGAGATGGCCCACGAAACTGCTCTCAACAATGCCCGAAAAAGTAGTGCAAGACCTTCCAGTGCGAGAAACTCGGTGAGTTCACCTATAATTGCACGAAATTCGTCATACGGGCGATCGCCTTATTCGCGTCGGCTATCGGACTTCTCCACTTCTGATTTTAGTCTCTCCCTTGACATCTCTCATCCGAGCTATCGGGTCGAAAAGCTTGCGTTCAAGGAGCAAGCCAGCTCCTTCTGGCGCCTAGCAAAAATGAATTCTCCTGAATGGGTTTACGCATTGCTCGGTTCAATCGGCTCCGTCTTTTGTGGGTTTTTAAGCGCCTTCTTTGCATATGTTCTTAGTGCTGTTCTAAGTGTCTACTACAATCCTAGCCATTCTTACATGAGTACAGAAATAGAGAAGTACTGCTATTTACTGATTGGGCTCTCATCAGCAGCTCTGCTCTTCAACACACAGCAGCATTTCTTCTGGGATATTGTCGGAGAAAATCTCACTACTCGAGTGAGGGAGAAAATGCTCGGGGCTGTGCTAAAAAATGAAATGGCCTGGTTCGATCAGGAGGAAAATGAGAGTGCTAGAATTGCAGCTAGGTTGGCTCTAGATGCGAACAATGTCAGATCTGCCATTGGAGATCGGATTTCTGTGATTGTTCAGAACACAGCTCTCATGTTAGTTGCCTGCACTGCTGGATTTGTGCTGCAATGGCGTCTGGCTCTCGTCCTCGTGGCTGTCTTCCCTGTGGTTGTTGCAGCCACCGTTTTGCAGAAAATGTTTATGACTGGTTTTTCGGGAGATCTTGAAGCATCTCATGCAAAGGCGACGCAATTGGCGGGAGAGGCGATAGCCAACGTAAGGACAGTGGCAGCCTTCAATTCCGAGGGGAAAATCGTCGGTCTTTTCTCTTCAAACCTTGAGATTCCTCTAAAACGCTGCTTTTGGAAAGGACAGATTGCCGGAAGTGGATTCGGCGTGGCCCAGTTTTTGCTCTATGCTTCGTATGCTCTTGGTCTTTGGTATGCTTCTTGGCTCGTGAAGCATGGAATATCGGATTTCTCGAACACAATCCGGGTTTTTATGGTCCTCATGGTCTCAGCCAACGGTGCAGCTGAAACACTGACCTTAGCTCCCGACTTCATCAAGGGCGGTCGAGCCATGCGCTCGGTCTTCGACCTTCTCGACCGAAAAACCGAGATTGAACCCGACGATCTAAATGCCACACCAGTCCAAGACCGATTACGAGGCGAAGTCGAATTCAAACACGTCGACTTTTCTTACCCGAGTCGATCTGACGTCCCGATTTTCCGCGACCTCACTCTCCGGGCTCGTTCAGGCAAGACTCTTGCCCTAGTTGGGCCAAGCGGGTGTGGTAAAAGCTCAGTAATTGCACTAATCCAGAGGTTCTACGAGCCAACATCTGGACGAGTCATGATCGATGGGAAAGATATCAGAAAATACAATCTCAAGTCCCTCAGACAGCACATTGCAATGGTTCCTCAGGAGCCATGTCTGTTCGGTTCGACCATCTACGAAAACATCGCTTATGGTCGGGAGTCAGCCACCGAAACAGAGGTAATTGAAGCAGCCACACTGGCCAACGCCCATAAGTTCATATCGGCATTGCCTGATGGGTACAAAACATTTGTAGGGGAAAGAGGTATGCAATTATCAGGTGGGCAGAAACAGAGGATCGCCATTGCTAGAGCTCTGGTCAGGAAGGCAGAGCTGATGCTACTTGACGAAGCAACCAGTTCATTAGATGCCGAATCCGAGCGATCAGTCCAGGAAGCTCTCGACCGGGCATGTTCAGGAAAAACAACCATAATCGTGGCTCATCGACTCTCGACTATCAGAAATGCTCATGTTATTGCTGTGATCGATGAAGGAAAAGTGGCCGAGCAGGGGTCACATTTGCATCTTTTAAAAAATTACCCAGATGGGTGTTACGCTCGGATGATTCAGCTACAAAGATTTACGCATAACCAAGTCATCGGGGTTGCTTCAGGCTCGACATCCTCGGCCAAACCCAGTCGGGAGGAAGACGATAAAGAGAGTTAG | 4020 | 49.15 | MSQDSEEIKTIEQWKWSEMQGLELVSSSTPTDNPEDQRREEGAEKAKGGEMENREPKVDGGVGGSGEKPETVPVVGFGELFRFADGLDYFLMALGSAGAVVHGCSLPLFLRFFADLVNSFGSNANNLDKMTQEVLKYAFYFLVVGAAIWASSWAEISCWMWTGERQSTKMRIKYLEAALNQDIQFFDTEVRTSDVVSAINTDAVMVQDAISEKLGNFIHYMATFVSGFVVGFTAAWQLALVTLAVVPLIAVIGAIHATTLAKLSAKSQEALSQAGNIVEQTIVQVRVVLAFVGESRALQSYSAALKVSQRLGYRSGFAKGLGLGATYFVVFCCYALLLWYGGYLVRHHHTNGGLAIATMFSVMIGGLALGQSIPSMTAFAKAKVAAAKILRIIDHKPAVDRNSKSGLELESVTGLVELKNVDFSYPSRPDVRILNNFSLNIPAGKTIALVGSSGSGKSTVVSLIERFYDPISGCVLLDGHDIKTLKLRWLRQQIGLVSQEPALFATTIKENILLGRPEANQLEVEEAARVANAHSFIIKLPDGYDTQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTSLVIAHRLSTIRKADLVAVIQQGSVSEIGTHDELIDRGENSIYAKLIRMQEMAHETALNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSLSLDISHPSYRVEKLAFKEQASSFWRLAKMNSPEWVYALLGSIGSVFCGFLSAFFAYVLSAVLSVYYNPSHSYMSTEIEKYCYLLIGLSSAALLFNTQQHFFWDIVGENLTTRVREKMLGAVLKNEMAWFDQEENESARIAARLALDANNVRSAIGDRISVIVQNTALMLVACTAGFVLQWRLALVLVAVFPVVVAATVLQKMFMTGFSGDLEASHAKATQLAGEAIANVRTVAAFNSEGKIVGLFSSNLEIPLKRCFWKGQIAGSGFGVAQFLLYASYALGLWYASWLVKHGISDFSNTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRKTEIEPDDLNATPVQDRLRGEVEFKHVDFSYPSRSDVPIFRDLTLRARSGKTLALVGPSGCGKSSVIALIQRFYEPTSGRVMIDGKDIRKYNLKSLRQHIAMVPQEPCLFGSTIYENIAYGRESATETEVIEAATLANAHKFISALPDGYKTFVGERGMQLSGGQKQRIAIARALVRKAELMLLDEATSSLDAESERSVQEALDRACSGKTTIIVAHRLSTIRNAHVIAVIDEGKVAEQGSHLHLLKNYPDGCYARMIQLQRFTHNQVIGVASGSTSSAKPSREEDDKES | 1339 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 22031978 | 22037143 | - | Bpe016290.1 | Bpe04g01570 | 103379 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe04g01570 | 1339 | PANTHER | ABC TRANSPORTER B FAMILY MEMBER 1 | 92 | 1314 | - | - | |
Bpe04g01570 | 1339 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 1071 | 1307 | IPR003439 | GO:0005524 | |
Bpe04g01570 | 1339 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 93 | 381 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Bpe04g01570 | 1339 | CDD | ABC_MTABC3_MDL1_MDL2 | 1071 | 1310 | - | - | |
Bpe04g01570 | 1339 | CDD | ABC_6TM_Pgp_ABCB1_D1_like | 92 | 377 | - | - | |
Bpe04g01570 | 1339 | Pfam | ABC transporter | 434 | 583 | IPR003439 | GO:0005524 | |
Bpe04g01570 | 1339 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1064 | 1310 | IPR027417 | - | |
Bpe04g01570 | 1339 | CDD | ABC_MTABC3_MDL1_MDL2 | 416 | 655 | - | - | |
Bpe04g01570 | 1339 | PANTHER | ATP-BINDING CASSETTE SUB-FAMILY B | 92 | 1314 | IPR039421 | - | |
Bpe04g01570 | 1339 | Gene3D | ABC transporter type 1, transmembrane domain | 139 | 1044 | IPR036640 | GO:0005524|GO:0016021 | |
Bpe04g01570 | 1339 | Gene3D | - | 1062 | 1320 | IPR027417 | - | |
Bpe04g01570 | 1339 | Pfam | ABC transporter transmembrane region | 750 | 1018 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Bpe04g01570 | 1339 | Pfam | ABC transporter transmembrane region | 98 | 366 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Bpe04g01570 | 1339 | ProSitePatterns | ABC transporters family signature. | 555 | 569 | IPR017871 | GO:0005524 | |
Bpe04g01570 | 1339 | SUPERFAMILY | ABC transporter transmembrane region | 735 | 1055 | IPR036640 | GO:0005524|GO:0016021 | |
Bpe04g01570 | 1339 | SMART | AAA_5 | 1098 | 1290 | IPR003593 | - | |
Bpe04g01570 | 1339 | SMART | AAA_5 | 443 | 629 | IPR003593 | - | |
Bpe04g01570 | 1339 | MobiDBLite | consensus disorder prediction | 20 | 70 | - | - | |
Bpe04g01570 | 1339 | CDD | ABC_6TM_Pgp_ABCB1_D2_like | 737 | 1053 | - | - | |
Bpe04g01570 | 1339 | MobiDBLite | consensus disorder prediction | 33 | 57 | - | - | |
Bpe04g01570 | 1339 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 416 | 652 | IPR003439 | GO:0005524 | |
Bpe04g01570 | 1339 | ProSitePatterns | ABC transporters family signature. | 1210 | 1224 | IPR017871 | GO:0005524 | |
Bpe04g01570 | 1339 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 748 | 1035 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Bpe04g01570 | 1339 | SUPERFAMILY | ABC transporter transmembrane region | 80 | 397 | IPR036640 | GO:0005524|GO:0016021 | |
Bpe04g01570 | 1339 | Pfam | ABC transporter | 1090 | 1238 | IPR003439 | GO:0005524 | |
Bpe04g01570 | 1339 | Gene3D | - | 414 | 679 | IPR027417 | - | |
Bpe04g01570 | 1339 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 408 | 655 | IPR027417 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe04g01570 | Bpe-Chr4:22031978 | Bpe11g01278 | Bpe-Chr11:9563050 | 4.65E-98 | dispersed | |
Bpe13g01409 | Bpe-Chr13:19342551 | Bpe04g01570 | Bpe-Chr4:22031978 | 7.55E-10 | dispersed | |
Bpe15g00933 | Bpe-Chr15:19106190 | Bpe04g01570 | Bpe-Chr4:22031978 | 5.83E-07 | dispersed | |
Bpe10g00479 | Bpe-Chr10:12051166 | Bpe04g01570 | Bpe-Chr4:22031978 | 1.32E-09 | transposed | |
Bpe13g00038 | Bpe-Chr13:1230557 | Bpe04g01570 | Bpe-Chr4:22031978 | 3.39E-18 | transposed | |
Bpe14g00185 | Bpe-Chr14:2174810 | Bpe04g01570 | Bpe-Chr4:22031978 | 0 | transposed | |
Bpe11g00324 | Bpe-Chr11:2381088 | Bpe04g01570 | Bpe-Chr4:22031978 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe04g01570 | K05658 | - | jre:109021322 | 2273.43 |