Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g01570 ATGTCACAAGATTCTGAGGAGATAAAGACGATTGAGCAGTGGAAATGGTCCGAAATGCAAGGGCTGGAACTCGTTTCTTCATCAACTCCGACTGACAACCCTGAGGATCAACGACGCGAGGAGGGTGCGGAGAAGGCGAAAGGAGGAGAAATGGAGAACCGGGAACCGAAGGTAGACGGCGGCGTAGGTGGCAGCGGAGAGAAACCGGAGACCGTTCCGGTAGTTGGGTTTGGAGAACTCTTCAGATTCGCCGACGGTTTAGATTACTTTTTGATGGCACTTGGTTCTGCCGGAGCCGTCGTTCACGGTTGTTCTTTGCCTCTGTTTCTCCGGTTCTTTGCCGATCTTGTCAACTCTTTTGGGTCGAATGCTAACAATCTGGACAAGATGACGCAGGAAGTTTTGAAGTATGCATTTTACTTTCTGGTCGTCGGAGCTGCCATATGGGCGTCTTCCTGGGCAGAGATTTCATGTTGGATGTGGACTGGAGAGAGGCAATCGACGAAGATGAGGATCAAATACCTCGAAGCTGCGTTAAACCAAGACATTCAGTTCTTCGACACAGAAGTTCGAACCTCCGATGTTGTTTCCGCCATTAATACCGACGCAGTGATGGTCCAAGACGCCATTAGCGAGAAGTTGGGTAATTTTATTCACTATATGGCAACTTTTGTGTCTGGTTTTGTGGTGGGTTTTACTGCTGCTTGGCAATTAGCCTTGGTCACTCTGGCCGTAGTTCCTCTCATCGCCGTAATCGGTGCTATCCACGCCACCACATTAGCCAAGCTCTCCGCCAAGAGCCAAGAGGCTCTTTCTCAAGCCGGAAACATCGTAGAACAGACAATAGTTCAAGTTCGGGTCGTTTTGGCGTTCGTCGGAGAATCAAGAGCCTTACAAAGTTACTCGGCTGCTCTCAAGGTTTCTCAGAGACTAGGCTACAGAAGTGGATTTGCAAAAGGGTTGGGTCTTGGCGCGACTTACTTTGTCGTCTTCTGCTGCTACGCCCTTCTTCTCTGGTACGGCGGCTATCTGGTCAGGCACCACCACACCAACGGCGGCCTAGCCATAGCCACCATGTTTTCCGTCATGATAGGTGGACTGGCTTTAGGCCAATCCATTCCAAGCATGACTGCATTTGCCAAAGCAAAAGTTGCAGCTGCTAAAATTCTTCGCATAATCGATCACAAACCGGCAGTCGATCGAAACAGCAAATCTGGTTTGGAATTAGAATCTGTAACAGGACTAGTCGAGCTAAAAAATGTAGATTTCTCATATCCATCAAGACCAGACGTACGAATACTTAACAACTTCTCCCTCAACATTCCGGCTGGCAAGACCATAGCTTTGGTCGGTAGCAGCGGATCGGGGAAGAGCACTGTAGTCTCACTTATTGAAAGATTTTACGACCCGATTTCAGGATGTGTTCTTCTCGACGGGCACGATATAAAGACGTTAAAGCTTAGATGGCTGAGGCAGCAAATAGGGTTGGTCAGTCAAGAGCCGGCTCTGTTTGCGACAACCATTAAAGAGAATATACTCTTGGGAAGGCCCGAGGCAAACCAGCTTGAGGTAGAAGAAGCTGCAAGAGTTGCTAATGCCCATTCTTTCATCATCAAACTTCCTGATGGCTATGATACTCAGGTGGGGGAGAGAGGCTTGCAGCTTTCCGGAGGGCAGAAGCAGAGAATCGCAATAGCCCGGGCGATGCTGAAAAACCCTGCTATCTTGCTCTTAGACGAGGCGACCAGTGCCCTTGACTCCGAATCGGAAAAGCTCGTTCAAGAGGCCCTCGATCGGTTCATGATCGGGAGGACAAGTCTCGTGATTGCCCATCGCCTCTCGACCATTCGCAAAGCCGATCTCGTTGCCGTTATCCAACAAGGAAGCGTCTCTGAAATCGGGACCCATGATGAGCTCATCGACAGAGGAGAAAACAGCATCTACGCCAAACTCATCCGAATGCAGGAGATGGCCCACGAAACTGCTCTCAACAATGCCCGAAAAAGTAGTGCAAGACCTTCCAGTGCGAGAAACTCGGTGAGTTCACCTATAATTGCACGAAATTCGTCATACGGGCGATCGCCTTATTCGCGTCGGCTATCGGACTTCTCCACTTCTGATTTTAGTCTCTCCCTTGACATCTCTCATCCGAGCTATCGGGTCGAAAAGCTTGCGTTCAAGGAGCAAGCCAGCTCCTTCTGGCGCCTAGCAAAAATGAATTCTCCTGAATGGGTTTACGCATTGCTCGGTTCAATCGGCTCCGTCTTTTGTGGGTTTTTAAGCGCCTTCTTTGCATATGTTCTTAGTGCTGTTCTAAGTGTCTACTACAATCCTAGCCATTCTTACATGAGTACAGAAATAGAGAAGTACTGCTATTTACTGATTGGGCTCTCATCAGCAGCTCTGCTCTTCAACACACAGCAGCATTTCTTCTGGGATATTGTCGGAGAAAATCTCACTACTCGAGTGAGGGAGAAAATGCTCGGGGCTGTGCTAAAAAATGAAATGGCCTGGTTCGATCAGGAGGAAAATGAGAGTGCTAGAATTGCAGCTAGGTTGGCTCTAGATGCGAACAATGTCAGATCTGCCATTGGAGATCGGATTTCTGTGATTGTTCAGAACACAGCTCTCATGTTAGTTGCCTGCACTGCTGGATTTGTGCTGCAATGGCGTCTGGCTCTCGTCCTCGTGGCTGTCTTCCCTGTGGTTGTTGCAGCCACCGTTTTGCAGAAAATGTTTATGACTGGTTTTTCGGGAGATCTTGAAGCATCTCATGCAAAGGCGACGCAATTGGCGGGAGAGGCGATAGCCAACGTAAGGACAGTGGCAGCCTTCAATTCCGAGGGGAAAATCGTCGGTCTTTTCTCTTCAAACCTTGAGATTCCTCTAAAACGCTGCTTTTGGAAAGGACAGATTGCCGGAAGTGGATTCGGCGTGGCCCAGTTTTTGCTCTATGCTTCGTATGCTCTTGGTCTTTGGTATGCTTCTTGGCTCGTGAAGCATGGAATATCGGATTTCTCGAACACAATCCGGGTTTTTATGGTCCTCATGGTCTCAGCCAACGGTGCAGCTGAAACACTGACCTTAGCTCCCGACTTCATCAAGGGCGGTCGAGCCATGCGCTCGGTCTTCGACCTTCTCGACCGAAAAACCGAGATTGAACCCGACGATCTAAATGCCACACCAGTCCAAGACCGATTACGAGGCGAAGTCGAATTCAAACACGTCGACTTTTCTTACCCGAGTCGATCTGACGTCCCGATTTTCCGCGACCTCACTCTCCGGGCTCGTTCAGGCAAGACTCTTGCCCTAGTTGGGCCAAGCGGGTGTGGTAAAAGCTCAGTAATTGCACTAATCCAGAGGTTCTACGAGCCAACATCTGGACGAGTCATGATCGATGGGAAAGATATCAGAAAATACAATCTCAAGTCCCTCAGACAGCACATTGCAATGGTTCCTCAGGAGCCATGTCTGTTCGGTTCGACCATCTACGAAAACATCGCTTATGGTCGGGAGTCAGCCACCGAAACAGAGGTAATTGAAGCAGCCACACTGGCCAACGCCCATAAGTTCATATCGGCATTGCCTGATGGGTACAAAACATTTGTAGGGGAAAGAGGTATGCAATTATCAGGTGGGCAGAAACAGAGGATCGCCATTGCTAGAGCTCTGGTCAGGAAGGCAGAGCTGATGCTACTTGACGAAGCAACCAGTTCATTAGATGCCGAATCCGAGCGATCAGTCCAGGAAGCTCTCGACCGGGCATGTTCAGGAAAAACAACCATAATCGTGGCTCATCGACTCTCGACTATCAGAAATGCTCATGTTATTGCTGTGATCGATGAAGGAAAAGTGGCCGAGCAGGGGTCACATTTGCATCTTTTAAAAAATTACCCAGATGGGTGTTACGCTCGGATGATTCAGCTACAAAGATTTACGCATAACCAAGTCATCGGGGTTGCTTCAGGCTCGACATCCTCGGCCAAACCCAGTCGGGAGGAAGACGATAAAGAGAGTTAG 4020 49.15 MSQDSEEIKTIEQWKWSEMQGLELVSSSTPTDNPEDQRREEGAEKAKGGEMENREPKVDGGVGGSGEKPETVPVVGFGELFRFADGLDYFLMALGSAGAVVHGCSLPLFLRFFADLVNSFGSNANNLDKMTQEVLKYAFYFLVVGAAIWASSWAEISCWMWTGERQSTKMRIKYLEAALNQDIQFFDTEVRTSDVVSAINTDAVMVQDAISEKLGNFIHYMATFVSGFVVGFTAAWQLALVTLAVVPLIAVIGAIHATTLAKLSAKSQEALSQAGNIVEQTIVQVRVVLAFVGESRALQSYSAALKVSQRLGYRSGFAKGLGLGATYFVVFCCYALLLWYGGYLVRHHHTNGGLAIATMFSVMIGGLALGQSIPSMTAFAKAKVAAAKILRIIDHKPAVDRNSKSGLELESVTGLVELKNVDFSYPSRPDVRILNNFSLNIPAGKTIALVGSSGSGKSTVVSLIERFYDPISGCVLLDGHDIKTLKLRWLRQQIGLVSQEPALFATTIKENILLGRPEANQLEVEEAARVANAHSFIIKLPDGYDTQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTSLVIAHRLSTIRKADLVAVIQQGSVSEIGTHDELIDRGENSIYAKLIRMQEMAHETALNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSLSLDISHPSYRVEKLAFKEQASSFWRLAKMNSPEWVYALLGSIGSVFCGFLSAFFAYVLSAVLSVYYNPSHSYMSTEIEKYCYLLIGLSSAALLFNTQQHFFWDIVGENLTTRVREKMLGAVLKNEMAWFDQEENESARIAARLALDANNVRSAIGDRISVIVQNTALMLVACTAGFVLQWRLALVLVAVFPVVVAATVLQKMFMTGFSGDLEASHAKATQLAGEAIANVRTVAAFNSEGKIVGLFSSNLEIPLKRCFWKGQIAGSGFGVAQFLLYASYALGLWYASWLVKHGISDFSNTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRKTEIEPDDLNATPVQDRLRGEVEFKHVDFSYPSRSDVPIFRDLTLRARSGKTLALVGPSGCGKSSVIALIQRFYEPTSGRVMIDGKDIRKYNLKSLRQHIAMVPQEPCLFGSTIYENIAYGRESATETEVIEAATLANAHKFISALPDGYKTFVGERGMQLSGGQKQRIAIARALVRKAELMLLDEATSSLDAESERSVQEALDRACSGKTTIIVAHRLSTIRNAHVIAVIDEGKVAEQGSHLHLLKNYPDGCYARMIQLQRFTHNQVIGVASGSTSSAKPSREEDDKES 1339
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 22031978 22037143 - Bpe016290.1 Bpe04g01570 103379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g01570 1339 PANTHER ABC TRANSPORTER B FAMILY MEMBER 1 92 1314 - -
Bpe04g01570 1339 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1071 1307 IPR003439 GO:0005524
Bpe04g01570 1339 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 93 381 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bpe04g01570 1339 CDD ABC_MTABC3_MDL1_MDL2 1071 1310 - -
Bpe04g01570 1339 CDD ABC_6TM_Pgp_ABCB1_D1_like 92 377 - -
Bpe04g01570 1339 Pfam ABC transporter 434 583 IPR003439 GO:0005524
Bpe04g01570 1339 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1064 1310 IPR027417 -
Bpe04g01570 1339 CDD ABC_MTABC3_MDL1_MDL2 416 655 - -
Bpe04g01570 1339 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 92 1314 IPR039421 -
Bpe04g01570 1339 Gene3D ABC transporter type 1, transmembrane domain 139 1044 IPR036640 GO:0005524|GO:0016021
Bpe04g01570 1339 Gene3D - 1062 1320 IPR027417 -
Bpe04g01570 1339 Pfam ABC transporter transmembrane region 750 1018 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bpe04g01570 1339 Pfam ABC transporter transmembrane region 98 366 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bpe04g01570 1339 ProSitePatterns ABC transporters family signature. 555 569 IPR017871 GO:0005524
Bpe04g01570 1339 SUPERFAMILY ABC transporter transmembrane region 735 1055 IPR036640 GO:0005524|GO:0016021
Bpe04g01570 1339 SMART AAA_5 1098 1290 IPR003593 -
Bpe04g01570 1339 SMART AAA_5 443 629 IPR003593 -
Bpe04g01570 1339 MobiDBLite consensus disorder prediction 20 70 - -
Bpe04g01570 1339 CDD ABC_6TM_Pgp_ABCB1_D2_like 737 1053 - -
Bpe04g01570 1339 MobiDBLite consensus disorder prediction 33 57 - -
Bpe04g01570 1339 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 416 652 IPR003439 GO:0005524
Bpe04g01570 1339 ProSitePatterns ABC transporters family signature. 1210 1224 IPR017871 GO:0005524
Bpe04g01570 1339 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 748 1035 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bpe04g01570 1339 SUPERFAMILY ABC transporter transmembrane region 80 397 IPR036640 GO:0005524|GO:0016021
Bpe04g01570 1339 Pfam ABC transporter 1090 1238 IPR003439 GO:0005524
Bpe04g01570 1339 Gene3D - 414 679 IPR027417 -
Bpe04g01570 1339 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 408 655 IPR027417 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01570 Bpe-Chr4:22031978 Bpe11g01278 Bpe-Chr11:9563050 4.65E-98 dispersed
Bpe13g01409 Bpe-Chr13:19342551 Bpe04g01570 Bpe-Chr4:22031978 7.55E-10 dispersed
Bpe15g00933 Bpe-Chr15:19106190 Bpe04g01570 Bpe-Chr4:22031978 5.83E-07 dispersed
Bpe10g00479 Bpe-Chr10:12051166 Bpe04g01570 Bpe-Chr4:22031978 1.32E-09 transposed
Bpe13g00038 Bpe-Chr13:1230557 Bpe04g01570 Bpe-Chr4:22031978 3.39E-18 transposed
Bpe14g00185 Bpe-Chr14:2174810 Bpe04g01570 Bpe-Chr4:22031978 0 transposed
Bpe11g00324 Bpe-Chr11:2381088 Bpe04g01570 Bpe-Chr4:22031978 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g01570 K05658 - jre:109021322 2273.43