Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g01571 ATGACTGCGTTTTTCAACCCAGAATCCTATGTCTACTCCTCCGTTCGTCCTCCCATCGTCTTCCCCATCAATCCTAACCTCTCCATTACCTCGTTTCTCTTTCAAAAAACCTCCTCTTTCCCTCACAGAATCGCTCTCATCGATGCTGAAAATGGCGAAAGCTTGACCTTCCACCAGCTCAAAGTCCATGTTTCCAAGCTCTCCCGGGCTCTGCTTGGGCTCGGAATCGAAAAGGGCAGTGTCGTTCTCATCTTCGCTCCTAACTCAGTTTACTTCGCTGTATCTTTCTTCGCCGTTGTGGCCATAGGAGGTATAGCAACCACCTGCAATCCTTCTTATACTGTACCGGAGCTTTTGAAGCAAGTTAAGGACTGTAATCCTAAGCTTATAATCACTGTTCCCGCACTTTGGGAGAAGGTCTGTTCATTGAATTTGACGTCAATATTTCTGGAGTCTCCGATTTCCTCTGATTTTCCGATACGCCGGATTCCCAGTGTCTGGTTTTACTCCGATTTAGTCGCGAAATTAAGTGAATCATCGGAGATTCCAGATAATAACGTCGTTCAGAATGATACAGCCGCGTTTCTGTACTCGTCCGGGACGACGGGGACTAGCAAGGGGGCTATTCTTACGCACAGAAACTTCATCGCAACGTCGTTAATCGCGACGGAGGATCAGGACAGTCGAGGCGACGGGATGAACGTCATTCTATGCTTCTTGCCCATGTTTCATGTGTACGGACTGGCTATTCTACTTTACGCTCAGCTTTCGAGAGGGAACCGATTGGTGACAATGACGAAGTTTGAGCTCGAGACGGCGATGAAGACGGTGGAGAAATACCGGATTACCCATCTCTACGCCGTTCCGCCGGTGATGATTGCTCTGGCGAAGGGAAGCACGGTGAAGAAGTACGATTCGTCGTCTTTGACGCAGATTTCATCAGGGGCGGCTCCTCTAGCGAATGATGTGATTGAAGCGGTTGCAAAGAATTTCCCCAACGCTAAAATTCTTCAGGGATATGGAATGACTGAAACTTGTGGAGTTACTTCAAAGGCCGCCCCAACGGAAAGATCAAGCCTCTCATTTTCATCTGGAACACTCTCGTCGGGAATCGAAGCCAAAATCATCGATGTCGATACTTTTAAGCCTCTTCCTCCCCGACATTTAGGAGAAATACACCTCCGAGGACCAAGTATCATGCAAGGATATTTAAATAATGTAGAGGCCACAAAGCTGACTATTGATGATCAAGGGTGGCTGCATACCGGAGATCTTGGATATTTCAACGATGCGGGAGAGCTGTTCGTCGTGGATCGAATCAAAGAACTCATTAAATGCTATGGTTTTCAGGTTGCACCAGCAGAGCTTGAAGGGATATTGCTTTCTCACCCAGAGATCATCGATGCGGTCGTGGTCCCATGTCCGGATGCAAAAGCCGGCGAGGTGCCAATTGCATTTGTCATTAAATCGACTAATAGCTCAATCACAACCGAAGATGTTCAGAAATTTGTCGTGAATCAGGTCGCACCGTTCAAAAGATTACGAAGTGTAACTTTTGTAAACAGCATACCGAAATCGGCTTCTGGGAAGATTTTGAGACGGGAGGTAATTCAAATGGTACGGGCTAGAATGTAG 1635 47.16 MTAFFNPESYVYSSVRPPIVFPINPNLSITSFLFQKTSSFPHRIALIDAENGESLTFHQLKVHVSKLSRALLGLGIEKGSVVLIFAPNSVYFAVSFFAVVAIGGIATTCNPSYTVPELLKQVKDCNPKLIITVPALWEKVCSLNLTSIFLESPISSDFPIRRIPSVWFYSDLVAKLSESSEIPDNNVVQNDTAAFLYSSGTTGTSKGAILTHRNFIATSLIATEDQDSRGDGMNVILCFLPMFHVYGLAILLYAQLSRGNRLVTMTKFELETAMKTVEKYRITHLYAVPPVMIALAKGSTVKKYDSSSLTQISSGAAPLANDVIEAVAKNFPNAKILQGYGMTETCGVTSKAAPTERSSLSFSSGTLSSGIEAKIIDVDTFKPLPPRHLGEIHLRGPSIMQGYLNNVEATKLTIDDQGWLHTGDLGYFNDAGELFVVDRIKELIKCYGFQVAPAELEGILLSHPEIIDAVVVPCPDAKAGEVPIAFVIKSTNSSITTEDVQKFVVNQVAPFKRLRSVTFVNSIPKSASGKILRREVIQMVRARM 544
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 22045519 22048758 - Bpe016291.1 Bpe04g01571 103380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g01571 544 Pfam AMP-binding enzyme 36 446 IPR000873 -
Bpe04g01571 544 CDD 4CL 21 535 - -
Bpe04g01571 544 Gene3D - 442 543 IPR045851 -
Bpe04g01571 544 PANTHER 4-COUMARATE:COA LIGASE-LIKE PROTEIN 4 541 - -
Bpe04g01571 544 Pfam AMP-binding enzyme C-terminal domain 455 530 IPR025110 -
Bpe04g01571 544 SUPERFAMILY Acetyl-CoA synthetase-like 22 542 - -
Bpe04g01571 544 ProSitePatterns Putative AMP-binding domain signature. 195 206 IPR020845 -
Bpe04g01571 544 Gene3D - 11 441 IPR042099 -
Bpe04g01571 544 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 4 541 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01571 Bpe-Chr4:22045519 Bpe11g00825 Bpe-Chr11:6153213 0 dispersed
Bpe11g00304 Bpe-Chr11:2228801 Bpe04g01571 Bpe-Chr4:22045519 3.17E-135 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g01571 K01904 - qsu:112025709 695.656