Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g01584 ATGAGTTTGGACGATCAGCATCAGATGGCAAGGAGTGTTGGGGAAGAGTGTATTCAAGAGGAAAAGGTTCAGAACTTACTGGAAAAGAAGCTCGAACCAGTTTGCAACAATGGCTTTGAGTCCACTAGTCGGATGCACATTGCACAATCTGACCTTGTTTTGATTCTTGATTATGGTTCGCAGTATACTCACCTGATCACTCGCCGTATCAGAAGTCTCTCTGTCTTCTCCCTCTGTATTTCAGGCACCTCTCCTCTCAAAACCATTTCCGACCTCAATCCCCGAGTCATTATTCTCTCTGGAGGACCTCACTCGGTCCACACACTCAACTCGCCCAGTTTCCCTCCTGGGTTCATTGAGTGGGCAGAATCCAATGGTGTTTTCGTTTTGGGCATTTGTTATGGGCTTCAACTGATTGTGCAGAGCCTTGGTGGGGTGGTCAAGGTTGGTGAGAAGCAGGAATATGGGAGGATGGAGATAAAGGTCGAGAAGGCTTGCGGGTTATTCAGGTCGAACATGGTCGGAGATTGTGAGGAAGTGTGGATGAGCCATGGCGATGAAGTGTCAGAACTTCCAGCAGGATTTGAGGTGGTAGCAAAGAGCCGCCAAGGAGCTGTCGCAGCTGTACAAAACCAGTCAAGAAGGTTTTATGGTTTACAGTATCATCCAGAGGTTACTCATTCACCACGGGGAATGGTAACACTTCGTTATTTTCTCTTTGAACTCTGTGGATTGACTGCCGGCTGGAAGATGGAAAACGTACTGGACGAAGAACTAAAAGTGATAAAAGAAATGCTGAGTCCCGAAGATCATGTTATTTGTGCTTTGTCCGGGGGTGTGGATTCAACTGTGGCTGCTACTATTGTCCACAAGGCCATTGGAGAAAGACTCCATTGTGTTTTTGTCGACAATGGCCTATTGAGATACAAGGAGAGAGAGCGAGTGATGGAAACCTTTGAAAGGGATCTTCATTTGCCCGTTACTTGTGTCGATGCTACTGAACAATTTCTCAGTAAGCTAAAAGGTGTGGTCGATCCAGAGATGAAAAGAAAGATAATTGGGAAAGAGTTTATTAGCATCTTTGATTCGTTTGCCCAAGATTTGGAGCGGAGAATAGGCAAAAAGCCTCGTTTTTTGGTTCAAGGGACGTTGTATCCGGATGTAATTGAATCTTGCCCTCCTCCTGGAAGTGGAAAAACCCACTCTCACACTATCAAGAGCCATCATAATGTTGGAGGGCTTCCGAAGGACATGAAATTAAAGCTCATCGAGCCGCTCAAACTCCTATTTAAGGACGAGGTTCGACAACTGGGTAGGATATTGAACGTTCCGGTGGGATTTCTAAAACGGCACCCTTTCCCTGGGCCCGGTCTAGCTGTTCGAGTGTTGGGTGATGTGACCGAAAACAATGCCTTGGATATTCTCCGACAGGTCGACGAAATCTTCATCCAGTCGATCAAGGATGTGGGGCTTTATGATTCTATATGGCAAGCTTTTGCAGTGTTTTTGCCAGTAAGATCAGTTGGAGTTCAAGGTGACCAGAGAACACATTCTCACGTCGTTGCTCTTCGGGCAGTCACAAGTCAAGATGGAATGACAGCCGATTGGTATAATTTTGAGCACAAGTTTCTTGATGATGTGAAAGGACTGTCAATTGAAGATCTTGCAGCTCGTAATGATCTGGTCCTTACTTTGCCCGGTAGAATTCAAGCCATACCAGATGGAACTGCAACAGCTTCCAAAACATCTGGGGGTTATGCATCATCAGCTCCTCGCGGTGAAATCAAATTTGGTTCAGATGGAAGGTTTGACGATGAATACTTTCAACAAACTGAGGAGTCGAGTCAGTTTAGGCAAAGAGATCAAGGATTGGAAACGATAGCCGAAGGATTGGATACATTTAAAGATATGGCTCACAGGATGAATGAGGAATTAGGTAGGCAAGTTCCTTTGATGGATGAGATCGACAATAAGGTGGACAAGGCATCATCAGCTGACCTTAAGAATACAAATGTGAGGCTTAAACACACAGTTAACCAGGACGTAGCTTCTGGCGTTTTCCAAAAGATTGAAAGCTGCAATTTGAAAGAACATGTCAAGAAGGCCGAATATGTTGTTAAAACATCCGATGTTTCACCTAATGTCACTAAAGATGTCATTGAAGATGTCACTGGAGTAGCAGAGGAAGAAACTCCAGTATTTCATGTTGAAGGAGAATTTGTCCAAAGAAAATGA 2235 44.74 MSLDDQHQMARSVGEECIQEEKVQNLLEKKLEPVCNNGFESTSRMHIAQSDLVLILDYGSQYTHLITRRIRSLSVFSLCISGTSPLKTISDLNPRVIILSGGPHSVHTLNSPSFPPGFIEWAESNGVFVLGICYGLQLIVQSLGGVVKVGEKQEYGRMEIKVEKACGLFRSNMVGDCEEVWMSHGDEVSELPAGFEVVAKSRQGAVAAVQNQSRRFYGLQYHPEVTHSPRGMVTLRYFLFELCGLTAGWKMENVLDEELKVIKEMLSPEDHVICALSGGVDSTVAATIVHKAIGERLHCVFVDNGLLRYKERERVMETFERDLHLPVTCVDATEQFLSKLKGVVDPEMKRKIIGKEFISIFDSFAQDLERRIGKKPRFLVQGTLYPDVIESCPPPGSGKTHSHTIKSHHNVGGLPKDMKLKLIEPLKLLFKDEVRQLGRILNVPVGFLKRHPFPGPGLAVRVLGDVTENNALDILRQVDEIFIQSIKDVGLYDSIWQAFAVFLPVRSVGVQGDQRTHSHVVALRAVTSQDGMTADWYNFEHKFLDDVKGLSIEDLAARNDLVLTLPGRIQAIPDGTATASKTSGGYASSAPRGEIKFGSDGRFDDEYFQQTEESSQFRQRDQGLETIAEGLDTFKDMAHRMNEELGRQVPLMDEIDNKVDKASSADLKNTNVRLKHTVNQDVASGVFQKIESCNLKEHVKKAEYVVKTSDVSPNVTKDVIEDVTGVAEEETPVFHVEGEFVQRK 744
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 22116149 22122775 - Bpe025701 Bpe04g01584 103393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g01584 744 ProSiteProfiles GMP synthetase ATP pyrophosphatase (GMPS ATP-PPase) domain profile. 249 450 IPR025777 GO:0003921|GO:0005524
Bpe04g01584 744 Hamap GMP synthase [glutamine-hydrolyzing] [guaA]. 50 576 IPR022955 GO:0003922|GO:0006177
Bpe04g01584 744 Gene3D HUPs 250 455 IPR014729 -
Bpe04g01584 744 PANTHER GMP SYNTHASE (GLUTAMINE-HYDROLYZING), PUTATIVE / GLUTAMINE AMIDOTRANSFERASE, PUTATIVE-RELATED 48 549 - -
Bpe04g01584 744 CDD SNARE_Qc 618 676 - -
Bpe04g01584 744 Gene3D - 456 567 - -
Bpe04g01584 744 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 52 248 - -
Bpe04g01584 744 TIGRFAM guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 53 244 IPR004739 GO:0003922|GO:0005524|GO:0006177
Bpe04g01584 744 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 614 663 IPR000727 -
Bpe04g01584 744 SUPERFAMILY GMP synthetase C-terminal dimerisation domain 455 551 - -
Bpe04g01584 744 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 238 470 - -
Bpe04g01584 744 Gene3D - 45 245 IPR029062 -
Bpe04g01584 744 SMART tSNARE_6 609 677 IPR000727 -
Bpe04g01584 744 CDD GMP_synthase_C 271 547 IPR001674 GO:0003922|GO:0005524|GO:0006164|GO:0006177
Bpe04g01584 744 PRINTS Glutamine amidotransferase superfamily signature 128 139 - -
Bpe04g01584 744 PRINTS Glutamine amidotransferase superfamily signature 97 106 - -
Bpe04g01584 744 PRINTS Glutamine amidotransferase superfamily signature 218 231 - -
Bpe04g01584 744 MobiDBLite consensus disorder prediction 574 600 - -
Bpe04g01584 744 CDD GATase1_GMP_Synthase 53 239 IPR004739 GO:0003922|GO:0005524|GO:0006177
Bpe04g01584 744 Pfam GMP synthase C terminal domain 485 553 IPR001674 GO:0003922|GO:0005524|GO:0006164|GO:0006177
Bpe04g01584 744 SUPERFAMILY SNARE fusion complex 606 675 - -
Bpe04g01584 744 SUPERFAMILY Class I glutamine amidotransferase-like 53 251 IPR029062 -
Bpe04g01584 744 Pfam Glutamine amidotransferase class-I 55 240 IPR017926 -
Bpe04g01584 744 PANTHER GMP SYNTHASE-RELATED 48 549 - -
Bpe04g01584 744 TIGRFAM guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 254 553 IPR001674 GO:0003922|GO:0005524|GO:0006164|GO:0006177
Bpe04g01584 744 Gene3D - 621 681 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01584 Bpe-Chr4:22116149 Bpe12g00722 Bpe-Chr12:12754107 2.20E-06 dispersed
Bpe08g01506 Bpe-Chr8:15740044 Bpe04g01584 Bpe-Chr4:22116149 2.41E-14 transposed
Bpe01g00179 Bpe-Chr1:1084082 Bpe04g01584 Bpe-Chr4:22116149 1.43E-39 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g01584 K01951 - jre:109014469 885.945