Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g01589 ATGGGAAGGAAGGGAAATTGGTTTTCTTCTGTAAAGAAAGCTCTCAGCCCTGAGGCCAAAGAGAAGAAAGATCAGAATTCCAAATCGAAGAAGAAATGGTTTGGAAAACAAAAACTGTTCGATCTGGAATCTACACCCTTGGAGAATGTCGCTGCCCCTCCTCCTCTCCAGCCAGAAGATGTGAATTTAAGCAGTGTTGTCAACGAAGAGAGTGATTGTGCTTGCTCGGTTGAAGTTCCTATGGCTCCAACAGTGACAACGTTGGCTGCCGAAACTGAAGTTGCTGCCACTGAGAATGTTCCAGACGTCAACCAACCAGCCTCGAAAGCTCAATTTATTGGAAAATCGAGGGAAGAAGTGGCGGCGATCAAGATTCAAACGGCATTTCGAGGATATCTGGCAAGAAGGGCATTGCGGGCTTTAAGAGGATTGGTGAGGCTTAAAACATTGATGGAAGGTTCGGTTGTGAAACGCCAAACTGCAAATACTCTTCGATGCATGCAAACCCTTTCTCGAGTTCAGTCTCAAATTCGTTTCAGGAGGATCCGGATGTTAGAAGAGAATCAAGCTCTTCAAAAACAACTTCTACAAAAACACGCTAAAGAGCTGGAGAATTTTCGGATGGGGGAGGAATGGGATGACAGCCTGCAGTCAAAGGAGCAAATTGAAGCTAATCTACTAAGCAAATATGAGGCTGCTATGAGAAGAGAGAGAGCATTGGCTTATTCATTCTCCCATCAGCAAACCTGGAAAAATTCTTCAAGATCTGTAAATCCAATGTTTATGGATCCAAGCAATCCCACCTGGGGTTGGAGCTGGTTAGAACGATGGACGGCAGCCCGTCCATGGGAAAATCGGGAAGAAAAGGAGCAGAATAACGAGAACTCATCTGTAAAGAGCGTAAGGCGGGGCATTTCTCCAGGAGAGATAAGCAAGTCTTATACTAAATACCAACTAAATGCTGAAACAAACTCCCCCACGGCTAGTGTAAAGGCAAGCAATTCAACTTTCGAGTCCCCTTTGACTCCTTCCAAGCCTGCATTGCCTGTATCAACTAGAAAAATGAAGCCCCCCAGCCCGAGAAGTGGCTTGGGTCTAGAAGATGACTCGAAGAGCATAGCTAATTTGCAGTCAGAACGTGTTCGAAGGCATAGCATGGGTGCGGGATCAGTGAGGGACGATGAGAGTATAGCTAGCTCTTCGGCCATGCCTAGCTACATGACCCCAACTGAATCTGCAAGAGCCAAATCCAAATCACAAAGCCCTTTCGCGATAGAGAAGGCCGAAACAGTAGAAAAAGTATCACCAATCCCCACTAAGAAGCGACTTTCATTTACGACTTCTCCCGCCCAACCAAGGCGGCTCTCTGGTCCGCCGAAGATCGAAAGCCGCTTCAACGCAGAAGCCCAAGTAGGCAATGGTGTGAGTGCG 1431 46.82 MGRKGNWFSSVKKALSPEAKEKKDQNSKSKKKWFGKQKLFDLESTPLENVAAPPPLQPEDVNLSSVVNEESDCACSVEVPMAPTVTTLAAETEVAATENVPDVNQPASKAQFIGKSREEVAAIKIQTAFRGYLARRALRALRGLVRLKTLMEGSVVKRQTANTLRCMQTLSRVQSQIRFRRIRMLEENQALQKQLLQKHAKELENFRMGEEWDDSLQSKEQIEANLLSKYEAAMRRERALAYSFSHQQTWKNSSRSVNPMFMDPSNPTWGWSWLERWTAARPWENREEKEQNNENSSVKSVRRGISPGEISKSYTKYQLNAETNSPTASVKASNSTFESPLTPSKPALPVSTRKMKPPSPRSGLGLEDDSKSIANLQSERVRRHSMGAGSVRDDESIASSSAMPSYMTPTESARAKSKSQSPFAIEKAETVEKVSPIPTKKRLSFTTSPAQPRRLSGPPKIESRFNAEAQVGNGVSA 477
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 22157407 22159512 + Bpe025702 Bpe04g01589 103398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g01589 477 ProSiteProfiles IQ motif profile. 118 146 IPR000048 GO:0005515
Bpe04g01589 477 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 1 472 - -
Bpe04g01589 477 MobiDBLite consensus disorder prediction 322 346 - -
Bpe04g01589 477 Pfam IQ calmodulin-binding motif 121 139 IPR000048 GO:0005515
Bpe04g01589 477 SMART iq_5 117 139 IPR000048 GO:0005515
Bpe04g01589 477 MobiDBLite consensus disorder prediction 1 32 - -
Bpe04g01589 477 MobiDBLite consensus disorder prediction 285 304 - -
Bpe04g01589 477 MobiDBLite consensus disorder prediction 322 477 - -
Bpe04g01589 477 Gene3D iswi atpase 115 154 - -
Bpe04g01589 477 MobiDBLite consensus disorder prediction 15 32 - -
Bpe04g01589 477 PANTHER IQ-DOMAIN 5-RELATED 1 472 - -
Bpe04g01589 477 MobiDBLite consensus disorder prediction 394 419 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01399 Bpe-Chr4:20673544 Bpe04g01589 Bpe-Chr4:22157407 3.23E-17 dispersed
Bpe04g01589 Bpe-Chr4:22157407 Bpe04g01873 Bpe-Chr4:23845940 1.14E-131 dispersed
Bpe14g00792 Bpe-Chr14:6008693 Bpe04g01589 Bpe-Chr4:22157407 1.04E-21 dispersed
Bpe04g01589 Bpe-Chr4:22157407 Bpe04g00888 Bpe-Chr4:5949504 4.00E-37 transposed
Bpe04g01589 Bpe-Chr4:22157407 Bpe02g00495 Bpe-Chr2:3201970 8.55E-38 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g01589 - - qsu:111993140 527.709