Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe04g01592 | CTCCGTTCTCCGATCAAGATGTATGCCACGCAGGGAGGGATCTTCGGCATTGAACATGATAACGCTGGTTTTACCGTGAACGGGAAACTATTGGACCTGTACTTTCCCCATACTCTGTTCACGGTTGAAAATAGCTGGCTCGATCTCATTTCTCAGCTCATTTCCTTCTTTTCTTCTCCAACAGGACGAACATTTTCTTCTCAGGTCAAGGAAGGTGATGATGGCATCTTTATTTTGTCCATTGATTTCCAACAATTTCGGAAAATATATGATATTCCTATATTTTATACAATGTTGGAGGATGCACCTAAAATTGCCCTTATATGTATGTCTGCCGCACTTCACCAGCAGGTTTTGTTGATGGAAAGAGAAAACAAGTTAGAAGTTGTTGCAAGAATTATAATCAGGCCACACAATTGCCCTGAATCTATGCTCTCTCTTAAGAACTTAAAAGCAGCTTATATTGATAAGTTTGCATCTGTTCGTGGTACTGTGGTTAAAGTTAGCACTGTCAGGCCCCTAGTAGTACAAATGAGTTTCTCCTGCTCAAAGTGTAAAACCAACATTACACGTAACTTTCCGGATGGAAAGTTTTCACCTCCATCAATTTGTGAGTTGGATGGATGCAAAAGCAAAACATTTAATCCAATTCGATCTACTTCTCGAGCTATAGATTTTCAGAAAATAAGACTACAGGAACTTCTAAAGTCAGAAGATCATGAAGAAGGCAGGGTGCCACGAACAGTAGAGTGTGAACTGACTGAAGATCTTGTTGATGCATGCATCCCTGGAGATGTGGTGACTGTTACTGGCATTATAAGAGTAATTAACAACTACATGGATATTGGAGGAGGAAAATCAAAAGGCAAAAATCAGGGATTCTTCTACTTGTATGTTGAAGCCATTTCAATTAAAAATTCCAAATTACAATCTGCACATGAGAAGGTAGAAGATTCTAATTTAGATGCCAGAGCAACAGAGCTACCTGATTTATATACATTCTCTCCAAGGGACTTGGAATTTATTGTGAAGTTCTCATCAGAACATGGTTCAGATATCTTTCGTCAAATACTTCATTCTATATGCCCATCCATCTATGGACACGACCTAGTTAAAGCTGGTATTGCACTAGCACTTTTTGGAGGCGTACAAAAGCATTCAAAAGATCAAAACAAGGTTCCTGTAAGAGGGGATATTCATGTCATAATTGTTGGTGATCCTGGACTAGGCAAAAGCCAGTTACTGCAAGCCGCTGCTGGTGTTTCTCCACGTGGTATTTATGTTTGTGGCAATGCCACAACAAAAGCAGGCCTGACTGTAGCCGTTGTGAAGGATCCTACAACAAGTGATTATGCATTTGAAGCTGGTATTTCTTCTTTTCTGATAGGTGCTATGGTCCTTGCTGACGGTGGATTGTGCTGCATTGATGAGTTTGATAAAATGTCTACAGAACATCAGGCTTTATTGGAAGCCATGGAACAACAATGCGTCTCTATTGCAAAGGCAGGACTGGTAGCAAGTTTGTCAGCACGCACTTCTGTCTTAGCAGCTGCAAACCCTGTTGGAGGTCATTATAACCGTGCAAAAACCGTAAACGAAAATTTGAAGATGAGTGCTGCTCTTCTCTCGCGATTTGATTTAGTTTTCATACTGCTCGATAAACCTAATGAGCTTCTGGATAAGCAAGTTTCAGATCATATTATGTCGGTAAATTACCAAATTTGGAAGATGATGATCTATCGTCTCTCTATGCTTCATAAGTTTGAAGAAATTCAGTCGTTTTGTTGTCTTTTACTTTCCAAAACCCTGTATTCTCATGGATTATTTCTCATTGTCGTTGTTGTAAGTTTTATTTCTAGCACATTAATAACTTCTTTCAATCGTTGCAGCTTCATCATGCTGGAAATGGAGAACTATATGCCTCCCCATTTAGAAAGTCCAGCTGTAGATAATGCTGGATGCATAGTTACAAGAGCGTCAGGGGGCTCCTTTGTTTCAAGGCTGAAACGAGATACAACAAAAGACGGTGATTTTGTTCCATTACCTGGCCAACTTCTACGCAAATATATAACTTATGCAAGAACCTTTGTCTTTCCTAGGATGTCAAAGCCGGCAGCAGATATCCTGCAGAAGTTTTATTTACGATTGAGAGATCAGAATACATCCGCAGATAGTACACCAATTACAGCTCGACAATTGGAAAGTTTGGTGAGGCTGGCACAAGCTCGAGCCAGGATCGACTTGAGAGAAGAGATAACAGCCCAAGATGCCATGGATGTGGTTGAAATTATGAAAGAATCCCTCTACGACAAGTATGTAGATGAGCATGGCGTTGTAGATTTTGGTCGCAGTGGGGGAATGAGTCAACAGAAAGAAGCTAAACGGTTTTTGAGTGCCCTCAATAAGCAGTCAGAATTACAACAAAAAGATTGTTTTACAATTTCCGAAATTTACAGTTTGGCCGATAGGATTTGTCTAAGAGTTCCTGATATCGACACATTTGTCGAGAATCTCAACAGTGTTGGATATCTCCTTAAGAAAGGGCCAAAGACATATCAGGTATGA | 2565 | 40.12 | LRSPIKMYATQGGIFGIEHDNAGFTVNGKLLDLYFPHTLFTVENSWLDLISQLISFFSSPTGRTFSSQVKEGDDGIFILSIDFQQFRKIYDIPIFYTMLEDAPKIALICMSAALHQQVLLMERENKLEVVARIIIRPHNCPESMLSLKNLKAAYIDKFASVRGTVVKVSTVRPLVVQMSFSCSKCKTNITRNFPDGKFSPPSICELDGCKSKTFNPIRSTSRAIDFQKIRLQELLKSEDHEEGRVPRTVECELTEDLVDACIPGDVVTVTGIIRVINNYMDIGGGKSKGKNQGFFYLYVEAISIKNSKLQSAHEKVEDSNLDARATELPDLYTFSPRDLEFIVKFSSEHGSDIFRQILHSICPSIYGHDLVKAGIALALFGGVQKHSKDQNKVPVRGDIHVIIVGDPGLGKSQLLQAAAGVSPRGIYVCGNATTKAGLTVAVVKDPTTSDYAFEAGISSFLIGAMVLADGGLCCIDEFDKMSTEHQALLEAMEQQCVSIAKAGLVASLSARTSVLAAANPVGGHYNRAKTVNENLKMSAALLSRFDLVFILLDKPNELLDKQVSDHIMSVNYQIWKMMIYRLSMLHKFEEIQSFCCLLLSKTLYSHGLFLIVVVVSFISSTLITSFNRCSFIMLEMENYMPPHLESPAVDNAGCIVTRASGGSFVSRLKRDTTKDGDFVPLPGQLLRKYITYARTFVFPRMSKPAADILQKFYLRLRDQNTSADSTPITARQLESLVRLAQARARIDLREEITAQDAMDVVEIMKESLYDKYVDEHGVVDFGRSGGMSQQKEAKRFLSALNKQSELQQKDCFTISEIYSLADRICLRVPDIDTFVENLNSVGYLLKKGPKTYQV | 854 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 22166731 | 22173166 | + | Bpe016310.1 | Bpe04g01592 | 103401 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe04g01592 | 854 | Pfam | MCM P-loop domain | 350 | 570 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
Bpe04g01592 | 854 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 363 | 774 | IPR027417 | - | |
Bpe04g01592 | 854 | Gene3D | - | 147 | 277 | IPR012340 | - | |
Bpe04g01592 | 854 | Gene3D | - | 331 | 778 | IPR027417 | - | |
Bpe04g01592 | 854 | SMART | mcm | 143 | 769 | IPR031327 | GO:0003677|GO:0005524|GO:0032508 | |
Bpe04g01592 | 854 | Gene3D | - | 174 | 224 | - | - | |
Bpe04g01592 | 854 | CDD | MCM8 | 357 | 767 | - | - | |
Bpe04g01592 | 854 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 514 | 526 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
Bpe04g01592 | 854 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 463 | 477 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
Bpe04g01592 | 854 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 490 | 503 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
Bpe04g01592 | 854 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 541 | 549 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
Bpe04g01592 | 854 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 396 | 411 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
Bpe04g01592 | 854 | SMART | AAA_5 | 397 | 555 | IPR003593 | - | |
Bpe04g01592 | 854 | Pfam | MCM AAA-lid domain | 685 | 768 | IPR041562 | - | |
Bpe04g01592 | 854 | PANTHER | DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER | 26 | 854 | IPR031327 | GO:0003677|GO:0005524|GO:0032508 | |
Bpe04g01592 | 854 | ProSiteProfiles | MCM family domain profile. | 353 | 567 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
Bpe04g01592 | 854 | PANTHER | DNA HELICASE MCM8 | 26 | 854 | - | - | |
Bpe04g01592 | 854 | Pfam | MCM OB domain | 147 | 276 | IPR033762 | - | |
Bpe04g01592 | 854 | SUPERFAMILY | Nucleic acid-binding proteins | 75 | 277 | IPR012340 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe04g01592 | Bpe-Chr4:22166731 | Bpe08g00796 | Bpe-Chr8:9861506 | 1.01E-78 | dispersed | |
Bpe04g01592 | Bpe-Chr4:22166731 | Bpe15g00852 | Bpe-Chr15:18514200 | 1.04E-08 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe04g01592 | K10737 | - | egt:105952885 | 1089.72 |