Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g01592 CTCCGTTCTCCGATCAAGATGTATGCCACGCAGGGAGGGATCTTCGGCATTGAACATGATAACGCTGGTTTTACCGTGAACGGGAAACTATTGGACCTGTACTTTCCCCATACTCTGTTCACGGTTGAAAATAGCTGGCTCGATCTCATTTCTCAGCTCATTTCCTTCTTTTCTTCTCCAACAGGACGAACATTTTCTTCTCAGGTCAAGGAAGGTGATGATGGCATCTTTATTTTGTCCATTGATTTCCAACAATTTCGGAAAATATATGATATTCCTATATTTTATACAATGTTGGAGGATGCACCTAAAATTGCCCTTATATGTATGTCTGCCGCACTTCACCAGCAGGTTTTGTTGATGGAAAGAGAAAACAAGTTAGAAGTTGTTGCAAGAATTATAATCAGGCCACACAATTGCCCTGAATCTATGCTCTCTCTTAAGAACTTAAAAGCAGCTTATATTGATAAGTTTGCATCTGTTCGTGGTACTGTGGTTAAAGTTAGCACTGTCAGGCCCCTAGTAGTACAAATGAGTTTCTCCTGCTCAAAGTGTAAAACCAACATTACACGTAACTTTCCGGATGGAAAGTTTTCACCTCCATCAATTTGTGAGTTGGATGGATGCAAAAGCAAAACATTTAATCCAATTCGATCTACTTCTCGAGCTATAGATTTTCAGAAAATAAGACTACAGGAACTTCTAAAGTCAGAAGATCATGAAGAAGGCAGGGTGCCACGAACAGTAGAGTGTGAACTGACTGAAGATCTTGTTGATGCATGCATCCCTGGAGATGTGGTGACTGTTACTGGCATTATAAGAGTAATTAACAACTACATGGATATTGGAGGAGGAAAATCAAAAGGCAAAAATCAGGGATTCTTCTACTTGTATGTTGAAGCCATTTCAATTAAAAATTCCAAATTACAATCTGCACATGAGAAGGTAGAAGATTCTAATTTAGATGCCAGAGCAACAGAGCTACCTGATTTATATACATTCTCTCCAAGGGACTTGGAATTTATTGTGAAGTTCTCATCAGAACATGGTTCAGATATCTTTCGTCAAATACTTCATTCTATATGCCCATCCATCTATGGACACGACCTAGTTAAAGCTGGTATTGCACTAGCACTTTTTGGAGGCGTACAAAAGCATTCAAAAGATCAAAACAAGGTTCCTGTAAGAGGGGATATTCATGTCATAATTGTTGGTGATCCTGGACTAGGCAAAAGCCAGTTACTGCAAGCCGCTGCTGGTGTTTCTCCACGTGGTATTTATGTTTGTGGCAATGCCACAACAAAAGCAGGCCTGACTGTAGCCGTTGTGAAGGATCCTACAACAAGTGATTATGCATTTGAAGCTGGTATTTCTTCTTTTCTGATAGGTGCTATGGTCCTTGCTGACGGTGGATTGTGCTGCATTGATGAGTTTGATAAAATGTCTACAGAACATCAGGCTTTATTGGAAGCCATGGAACAACAATGCGTCTCTATTGCAAAGGCAGGACTGGTAGCAAGTTTGTCAGCACGCACTTCTGTCTTAGCAGCTGCAAACCCTGTTGGAGGTCATTATAACCGTGCAAAAACCGTAAACGAAAATTTGAAGATGAGTGCTGCTCTTCTCTCGCGATTTGATTTAGTTTTCATACTGCTCGATAAACCTAATGAGCTTCTGGATAAGCAAGTTTCAGATCATATTATGTCGGTAAATTACCAAATTTGGAAGATGATGATCTATCGTCTCTCTATGCTTCATAAGTTTGAAGAAATTCAGTCGTTTTGTTGTCTTTTACTTTCCAAAACCCTGTATTCTCATGGATTATTTCTCATTGTCGTTGTTGTAAGTTTTATTTCTAGCACATTAATAACTTCTTTCAATCGTTGCAGCTTCATCATGCTGGAAATGGAGAACTATATGCCTCCCCATTTAGAAAGTCCAGCTGTAGATAATGCTGGATGCATAGTTACAAGAGCGTCAGGGGGCTCCTTTGTTTCAAGGCTGAAACGAGATACAACAAAAGACGGTGATTTTGTTCCATTACCTGGCCAACTTCTACGCAAATATATAACTTATGCAAGAACCTTTGTCTTTCCTAGGATGTCAAAGCCGGCAGCAGATATCCTGCAGAAGTTTTATTTACGATTGAGAGATCAGAATACATCCGCAGATAGTACACCAATTACAGCTCGACAATTGGAAAGTTTGGTGAGGCTGGCACAAGCTCGAGCCAGGATCGACTTGAGAGAAGAGATAACAGCCCAAGATGCCATGGATGTGGTTGAAATTATGAAAGAATCCCTCTACGACAAGTATGTAGATGAGCATGGCGTTGTAGATTTTGGTCGCAGTGGGGGAATGAGTCAACAGAAAGAAGCTAAACGGTTTTTGAGTGCCCTCAATAAGCAGTCAGAATTACAACAAAAAGATTGTTTTACAATTTCCGAAATTTACAGTTTGGCCGATAGGATTTGTCTAAGAGTTCCTGATATCGACACATTTGTCGAGAATCTCAACAGTGTTGGATATCTCCTTAAGAAAGGGCCAAAGACATATCAGGTATGA 2565 40.12 LRSPIKMYATQGGIFGIEHDNAGFTVNGKLLDLYFPHTLFTVENSWLDLISQLISFFSSPTGRTFSSQVKEGDDGIFILSIDFQQFRKIYDIPIFYTMLEDAPKIALICMSAALHQQVLLMERENKLEVVARIIIRPHNCPESMLSLKNLKAAYIDKFASVRGTVVKVSTVRPLVVQMSFSCSKCKTNITRNFPDGKFSPPSICELDGCKSKTFNPIRSTSRAIDFQKIRLQELLKSEDHEEGRVPRTVECELTEDLVDACIPGDVVTVTGIIRVINNYMDIGGGKSKGKNQGFFYLYVEAISIKNSKLQSAHEKVEDSNLDARATELPDLYTFSPRDLEFIVKFSSEHGSDIFRQILHSICPSIYGHDLVKAGIALALFGGVQKHSKDQNKVPVRGDIHVIIVGDPGLGKSQLLQAAAGVSPRGIYVCGNATTKAGLTVAVVKDPTTSDYAFEAGISSFLIGAMVLADGGLCCIDEFDKMSTEHQALLEAMEQQCVSIAKAGLVASLSARTSVLAAANPVGGHYNRAKTVNENLKMSAALLSRFDLVFILLDKPNELLDKQVSDHIMSVNYQIWKMMIYRLSMLHKFEEIQSFCCLLLSKTLYSHGLFLIVVVVSFISSTLITSFNRCSFIMLEMENYMPPHLESPAVDNAGCIVTRASGGSFVSRLKRDTTKDGDFVPLPGQLLRKYITYARTFVFPRMSKPAADILQKFYLRLRDQNTSADSTPITARQLESLVRLAQARARIDLREEITAQDAMDVVEIMKESLYDKYVDEHGVVDFGRSGGMSQQKEAKRFLSALNKQSELQQKDCFTISEIYSLADRICLRVPDIDTFVENLNSVGYLLKKGPKTYQV 854
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 22166731 22173166 + Bpe016310.1 Bpe04g01592 103401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g01592 854 Pfam MCM P-loop domain 350 570 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bpe04g01592 854 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 363 774 IPR027417 -
Bpe04g01592 854 Gene3D - 147 277 IPR012340 -
Bpe04g01592 854 Gene3D - 331 778 IPR027417 -
Bpe04g01592 854 SMART mcm 143 769 IPR031327 GO:0003677|GO:0005524|GO:0032508
Bpe04g01592 854 Gene3D - 174 224 - -
Bpe04g01592 854 CDD MCM8 357 767 - -
Bpe04g01592 854 PRINTS Mini-chromosome maintenance (MCM) protein family signature 514 526 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bpe04g01592 854 PRINTS Mini-chromosome maintenance (MCM) protein family signature 463 477 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bpe04g01592 854 PRINTS Mini-chromosome maintenance (MCM) protein family signature 490 503 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bpe04g01592 854 PRINTS Mini-chromosome maintenance (MCM) protein family signature 541 549 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bpe04g01592 854 PRINTS Mini-chromosome maintenance (MCM) protein family signature 396 411 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bpe04g01592 854 SMART AAA_5 397 555 IPR003593 -
Bpe04g01592 854 Pfam MCM AAA-lid domain 685 768 IPR041562 -
Bpe04g01592 854 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 26 854 IPR031327 GO:0003677|GO:0005524|GO:0032508
Bpe04g01592 854 ProSiteProfiles MCM family domain profile. 353 567 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bpe04g01592 854 PANTHER DNA HELICASE MCM8 26 854 - -
Bpe04g01592 854 Pfam MCM OB domain 147 276 IPR033762 -
Bpe04g01592 854 SUPERFAMILY Nucleic acid-binding proteins 75 277 IPR012340 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01592 Bpe-Chr4:22166731 Bpe08g00796 Bpe-Chr8:9861506 1.01E-78 dispersed
Bpe04g01592 Bpe-Chr4:22166731 Bpe15g00852 Bpe-Chr15:18514200 1.04E-08 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g01592 K10737 - egt:105952885 1089.72