Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g01593 ATGATGGAGATTAGGCTTCTCGTTCTGTCCCTCTTCCTCTTCATCAACGCCTCCATTGCTCAGATGCCAGGGTTTGTAAGTTTGGACTGTGGAGGTGAAGAAAGTTTTACAGATGAAATTGGTCTACAATGGAGTCCTGATAATCAACTTCGATACGGGCAGACGACAAATATATCTGTTGCAAATGAGACACGAAAGCAATACAAGACAGTCAGATTTTTTCCGGCTGATTCAAGGAAGTATTGTTATACTCTTAACGTAACTAGTAGGACCAGGTACCTTGTTAGAACATCATTCTTGTATGGAAACTTTGATGAAAACAATGTTTATCCAAAATTCGACATTTCCCTCGGACCAACTTATTGGTCCACCATTGTCATATCTGATGCTGATACTATAGAGGTCAGAGAGTTAATATTTTTAGCAACAAGTCCTACTATGAGTGTGTGCTTATCGAATGCCACTACCGGACAACCATTTATATCCACTCTCGAGCTCCGACCATTTAATGGCTCAATGTATTACACGGAATTTGAAAATCAATTTTACCTCGGTGTTTCTGCAAGGATAAACTTTGGTGCAGATTCTGAAGCTCCAGTGAGGTATCCAGATGACCCGTTTGATCGTATTTGGGAGGCAGACTCTGTGAAGAAAGCAAATTTCTTGGTCGATGTTGCTGCAGGTACTGAAAAAGTGTCAACCAATCAGCCAATTTATGTAGACAGAGATACCAGACCACCTGAAAAAGTAATGCAAACGGCCGTTGTTGGTAGAAACGGGTCGTTGACTTATCGGTTGAATTTGGATGGTTTTCCTGGTTTTGGATGGGCAGTCACCTACTTTGCGGAAATCGAAGATTTGACTCCAACGGATTCAAGAAAGTTCAGACTAGTACTTCCGGGCTCACCTGATGTAAGCAAAGCCGTCGTGAACATCGAAGAAAATGCACAGGGGAAATATCGCCTCTATGAACCGGGATTTACAAACCTATCCCTTCCTTTTGTTTTGTCTTTTAGATTTGGCAAAACATCAGACTCTAACTTGGGGCCTCTCTTAAATGCTATGGAGATCAATAAATATCTCGAGAAGAACGAAGGGTCTATAGATGAGCCGGTTATTAGTGATGTTGTTTCGCGCTATTCGTCAGTAGGCTGGGATGAAGAAGGTGGCGATCCATGTTTGCCTGTTCCATGGTCATGGCTGCTGTGTAATACAAATCAGCAACCACAAATAGTTAAAATTTCGTTGTCGGAGAGGAATTTGACGGGAACCATCCCTTCGGCGTTGGCAAATCTTGAGGGTTTAGAAGAATTATGGCTTGATGGGAATGCGTTGACGGGTCCAATACCGGATTTGACTGGATGTGTGAACTTGAAGATCTTGCATCTCGAGAATAACAAATTGACCGGAGGGCTGCCTTCATCTTTATTGAATCTACCAAATTTAAGGGAACTGTATGTGCAAAATAACATGTTATCTGGAAAAGTGCCATCAGTTCTTCTCAGTAAAAACTTGATCTTGGACTTCTCTGGAAATAACAATCTTAGTACAGAGGGTGAGAAAAAAGTGCATGCCAATATAATCATAGCTTCAGCAGTTGGTGTTGCTGTCCTACTTGTAGCTACTATAATTGCATGTTTATGCTTGCGGAAGGGCCAGAGAAGTAAGAAACATAATGAACAAGCTTCTTATAGAGAAGCACTGCCTGTCCGGAGTCTTGTTTCTTTTAAAAGTGATGCACCAAAGGATGTAGCACACTGTTTCAGTGTCGATGAAATTGAAGATGCCACTAGAAATTTCGAGAGGAAAATCGGGTCTGGAGGTTTTGGTGTCGTTTACTACGGCAAGCTAGATGATGGAAAAGAAATTGCAGTTAAAGTTCTGACCAGTAATTCTTTCCAAGGAAAGCGGGAATTTACAAACGAGGTAACTCTTTTGTCGAGGATTCATCATCGAAACCTGGTACAATTTCTCGGATATTGTCAAGAAGAATGGAGGAGCATGCTTATTTACGAGTTCATGCATAATGGAACCCTCAAGGAGCATCTCTACGGCCCATTAACGCATGAAAACGGTATGAATTGGATCAAACGGCTTGAGATAGCCGAAGACGCCGCAAAAGGGATTGAGTATCTTCACACAGGTTGTACACCGGCTATTATTCATAGGGACTTAAAAAGCAGCAATATTCTTTTGGACAAGCACATGAGGGCCAAAGTTTCTGATTTCGGCCTTTCGAAGCTTGCTGTAGATGGTGCCTCCCACGTCTCTAGCATTGTTCGAGGAACTGTCGGTTATTTGGATCCCGAATATTACATATCACAACAGCTAACGGACAAGAGCGATGTTTATAGTTTCGGGGTCATTCTTCTCGAGTTGATATCTGGTCAAGAGGCCATATCAAACGAGAGCTTTGGTGTCAACTGTCGCAACATAGTACAGTGGGCAAAGCTGCACATCGAGAGCGGAGACATCCAAGGGATCATCGACCCGTCACTGCAGAACAAATATGATATTCAGTCGATGTGGAAAATAGCGGAGAAAGCATTGATGTGCGTGCAGCCTCATGGGAATATGAGGCCATCCATATCCGAAGTGCTAAAAGAGATTCAAGATGCACTAATGATAGAGAAGGAAACCAGAGCAAGTCGAGAAGGAAATTCCAACTCAGACGACTTCTCGAGACGCACGATCCAGTATTCTATGAATACAGAACTGCAAGATTTGGTGGCGATGGAGAATTATGTGTCGTTTGATGAGTCCATTGCCCGACCCACTGCCAGGTAG 2787 42.7 MMEIRLLVLSLFLFINASIAQMPGFVSLDCGGEESFTDEIGLQWSPDNQLRYGQTTNISVANETRKQYKTVRFFPADSRKYCYTLNVTSRTRYLVRTSFLYGNFDENNVYPKFDISLGPTYWSTIVISDADTIEVRELIFLATSPTMSVCLSNATTGQPFISTLELRPFNGSMYYTEFENQFYLGVSARINFGADSEAPVRYPDDPFDRIWEADSVKKANFLVDVAAGTEKVSTNQPIYVDRDTRPPEKVMQTAVVGRNGSLTYRLNLDGFPGFGWAVTYFAEIEDLTPTDSRKFRLVLPGSPDVSKAVVNIEENAQGKYRLYEPGFTNLSLPFVLSFRFGKTSDSNLGPLLNAMEINKYLEKNEGSIDEPVISDVVSRYSSVGWDEEGGDPCLPVPWSWLLCNTNQQPQIVKISLSERNLTGTIPSALANLEGLEELWLDGNALTGPIPDLTGCVNLKILHLENNKLTGGLPSSLLNLPNLRELYVQNNMLSGKVPSVLLSKNLILDFSGNNNLSTEGEKKVHANIIIASAVGVAVLLVATIIACLCLRKGQRSKKHNEQASYREALPVRSLVSFKSDAPKDVAHCFSVDEIEDATRNFERKIGSGGFGVVYYGKLDDGKEIAVKVLTSNSFQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEWRSMLIYEFMHNGTLKEHLYGPLTHENGMNWIKRLEIAEDAAKGIEYLHTGCTPAIIHRDLKSSNILLDKHMRAKVSDFGLSKLAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNESFGVNCRNIVQWAKLHIESGDIQGIIDPSLQNKYDIQSMWKIAEKALMCVQPHGNMRPSISEVLKEIQDALMIEKETRASREGNSNSDDFSRRTIQYSMNTELQDLVAMENYVSFDESIARPTAR 928
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 22174226 22179276 - Bpe016311.1 Bpe04g01593 103402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g01593 928 CDD STKc_IRAK 604 871 - -
Bpe04g01593 928 SMART serkin_6 598 875 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe04g01593 928 Gene3D - 25 167 - -
Bpe04g01593 928 ProSitePatterns Protein kinases ATP-binding region signature. 604 626 IPR017441 GO:0005524
Bpe04g01593 928 SUPERFAMILY Protein kinase-like (PK-like) 584 868 IPR011009 -
Bpe04g01593 928 Pfam Protein tyrosine and serine/threonine kinase 600 815 IPR001245 GO:0004672|GO:0006468
Bpe04g01593 928 PANTHER TYROSINE KINASE DOMAIN PROTEIN 10 927 - -
Bpe04g01593 928 Gene3D Transferase(Phosphotransferase) domain 1 674 897 - -
Bpe04g01593 928 Pfam Malectin-like domain 28 358 IPR024788 -
Bpe04g01593 928 SUPERFAMILY L domain-like 396 515 - -
Bpe04g01593 928 ProSitePatterns Serine/Threonine protein kinases active-site signature. 720 732 IPR008271 GO:0004672|GO:0006468
Bpe04g01593 928 Gene3D Phosphorylase Kinase; domain 1 575 673 - -
Bpe04g01593 928 PANTHER OS07G0107800 PROTEIN-RELATED 10 927 - -
Bpe04g01593 928 ProSiteProfiles Protein kinase domain profile. 598 874 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe04g01593 928 Gene3D Ribonuclease Inhibitor 370 530 IPR032675 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01593 Bpe-Chr4:22174226 Bpe10g00773 Bpe-Chr10:13929343 0 dispersed
Bpe14g01176 Bpe-Chr14:8803276 Bpe04g01593 Bpe-Chr4:22174226 5.03E-51 dispersed
Bpe04g01593 Bpe-Chr4:22174226 Bpe09g00009 Bpe-Chr9:86899 1.83E-147 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63333 PF12819 Malectin_like 1.40E-77 CL0202 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g01593 - - csv:101212456 1454.11