Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g01598 ATGGTCAATTTCTGCTGGAAAGCTCGTGTCGATGACGAAGGAACTCGTTTTCACGGTGATTCGAGTAAGGAAATTGATGGGTTGCTATGGTCTAAGGATTTGGGGTTCCATGATCATGGTCAATTTTCGATGGCAGTGGTTCAGGCGAACTCAACGCTGGAGGATCAAAGCCAACTCGAATCAGGCCCGTTGAACTTGAGCCCTACTGATCCACGTGCAACTTTTGTCGGAGTATATGACGGCCACGGTGCAGCAGAGGCATCACGGTTCGTCAACGAATATCTTTTCTGCAACATCAAGAGATTTGCATCTACTCATCAAGGGATATCCGAAGATGTCATTAGACAGGCTTTTGCAGCAACAGAAGAAGCTTTTCTCTCCCTCGTGGGGAAAACATGGCTTGTCAAGCCAGAGATGGCCTCATCCGGTTCGTGTTGTCTGGTAGGACTAATCGCCAAAGGCTATCTACATATTGCAAACTTGGGAGATTCCCGAGTTGTATTAGGCAGAGCTGAGAAAGGATCTCAAGACATCAAGGCTATTCAGCTATCCACAGATCACAATGCAAGTTTTGAGTCTGTGAGACAGGAACTACGAGAGGCTCATCCACAAGATCCCAACATTGTTCAGCTTAAACACGGAGTTTGGCGTGTCAAAGGCCTGATCAAAGTTTCTGGTTCAATTGGAGATGCATATTTGAAGAAGTCAGAGTTCAACAGAGCGCCGCTGTTGCCGAAGTTTAGACTGAACAAACCATTTCACAAGCCAATTCTTAGCTCTGAGCCATCAATTTCAGCTCACAAAATCCGTCCGGGAGATCAGTTTCTTATATTTGCTTCTGATGGTTTATGGGACCATCTTAGCAATCAGAGAGCTGTAGACATTGTTGGTAGTTACCCAAGTAACGGTATTGCAAGGAGGCTGGTGAAGGCTGCTCTTGAGGAAGCTGCTAAGAAAAGAGAAATACGATACTCTGACCTGAAATTGATTGAAAGAGGAGTTAGAAGGCATTTTCATGATGATATAACGGTAATTGTTGTGTTTTTAGATGCTCACGCAATCAATGGAGGGTTTCTCGACACTTCATTTTCCATTAGAGGAGGAGAAGGTCTTCCTGCTCCTGCAAAAAATTCAAACTAG 1140 44.74 MVNFCWKARVDDEGTRFHGDSSKEIDGLLWSKDLGFHDHGQFSMAVVQANSTLEDQSQLESGPLNLSPTDPRATFVGVYDGHGAAEASRFVNEYLFCNIKRFASTHQGISEDVIRQAFAATEEAFLSLVGKTWLVKPEMASSGSCCLVGLIAKGYLHIANLGDSRVVLGRAEKGSQDIKAIQLSTDHNASFESVRQELREAHPQDPNIVQLKHGVWRVKGLIKVSGSIGDAYLKKSEFNRAPLLPKFRLNKPFHKPILSSEPSISAHKIRPGDQFLIFASDGLWDHLSNQRAVDIVGSYPSNGIARRLVKAALEEAAKKREIRYSDLKLIERGVRRHFHDDITVIVVFLDAHAINGGFLDTSFSIRGGEGLPAPAKNSN 379
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 22202765 22204288 - Bpe016315.2 Bpe04g01598 103407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g01598 379 Gene3D - 31 355 IPR036457 -
Bpe04g01598 379 ProSiteProfiles PPM-type phosphatase domain profile. 41 349 IPR001932 -
Bpe04g01598 379 Pfam Protein phosphatase 2C 62 318 IPR001932 -
Bpe04g01598 379 SMART PP2C_4 31 347 IPR001932 -
Bpe04g01598 379 PANTHER PROTEIN PHOSPHATASE 2C 67-RELATED 4 371 - -
Bpe04g01598 379 SUPERFAMILY PP2C-like 50 350 IPR036457 -
Bpe04g01598 379 ProSitePatterns PPM-type phosphatase domain signature. 75 83 IPR000222 GO:0043169
Bpe04g01598 379 CDD PP2Cc 42 349 IPR001932 -
Bpe04g01598 379 PANTHER ALPHABET, ISOFORM E-RELATED 4 371 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01598 Bpe-Chr4:22202765 Bpe04g01861 Bpe-Chr4:23792711 1.38E-172 dispersed
Bpe15g01084 Bpe-Chr15:20034102 Bpe04g01598 Bpe-Chr4:22202765 1.25E-166 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g01598 K01102 - csv:101210750 513.072