Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g01626 ATGCAGATGGATTCTACTTCCTTCCCCGACCACCGCGCGTCGATGCCAGTTCTCGCCGACGACGACGATCACGATAACGCCTTTGCCTCAGACCTGTGGGACGATTGGAGCTCCGATGATGCTCATTTCCCCGCTTCCTCTTTTCTCTGCCTCTTCTGTGATCTCAGTTTTCAATCCTCCTCTTCCTTGTTTGAACACTGTATCTCCTCTCACCACTTCCACTTTTATGCCTCTCGCAAAGCCCTGGCTTTAGATTTCTATGGTTCTATCAAGCTCGTCAACTACATCCGCTCTCAGGTTGCACAAAACAGGTGTTGGTGTTGCGGCCTCTTGTGCCCATCCAAGCTGGATCTGCTCAATCATATGCACGAACCACTGAGCTTTGAAGCCATAAAGCCTCTTCTCGATGAGGATAAGTATTTAAAACCTTTCCTCCAAAATGATTCGCTCTTGTACAGTTTTGATGACGAAGATGAAGTTGGCCAAGAGGAATTTCAGAAAGTAGATTATCATGTTGAACTTATGAATGATATGAAATATGTTGGCGGACTTTGCATTGATGAAGAAATCACTGAGAGAGAATTGGCATTCAATGTTACTAATATGGATGCCAATGGAAGGGTAAATAGTGCACCCACCTCATTTAGTCACTTGGATGCTGCATGCTCAGACATTGCACCATGCAAAACAAAACAACATGGTGAGCAGTCAAGAGTTTCAATTGAGAATCTTGCTCGGAAGGATGCCAAGATTTTGAACGAAAGTTATTTTGGGGCATATAGTTCATTTGGCATTCACAGGGAGATGCTAAGTGATAAGGTAAGAATGGAAGCTTATAGTAAAGCTATTTTGCAAAATCCATCTCTCTTGAACAATGCAGTGGTAATGGATGTTGGATGTGGAAGTGGTATACTGAGTCTCTTTGCAGCTAAAGCAGGGGCTTCAAAAGTGATTGCGGTTGAAGCGAGTGGAAAGATGGCTACAGTAGCAACTCAGATTGCAAAAGATAACGGTCTTTGGAAGAATGGAAGCCAAGATGAAGATGGGGTTGTTGAAGTGGTTCAAGGTATGGTTGAAGAACTTGATAAATCCATACAGATTCAGCCTAGAAGTGTTGATGTGCTAGTGAGTGAGTGGATGGGTTATTGCCTGCTTTATGAATCTATGCTGAGTTCAGTTCTGTTTGCTCGGGACCATTGGTTGAAGCCTGGAGGTGCAATACTTCCTGATACTGCATCTATTTTCGTTGCAGGGTTTGGAAAAGGTGGAACTAGTCTTCCATTTTGGGAAAATGTTTATGGTTTTGATATGTCATGCATTGGCAAGGAGCTTGCCAGTGATGCAGCCAAAATTCCAATAGTAGATGTTGTGGATGCTCATGATATAGTGACCATTCCTGCAATTCTACATACTTTTGATCTGGCCAGAATGGAAGCTGATGAAGTGGATTTCACTGCATGCACGGAGTTGGAACCTAGTTTAGGCAGCAACTTGGGTGATTTGGAGTCAAGAATGTGGTGTCATGGCATCGTCTTATGGTTTGATACAGGTTTTACGAGCAGATTCTGCAGAGAAATGGCTGCCACGTTGTCTACATCCCCGTTTACCCCTAGCACTCACTGGGCTCAGACAGTATTGACATTTAGAGAACCTATTGCACTGTCATTGAAAGGTTCCGGCAATGGTGGATCATTGCACGTTGGTACGGAGGAATGTCCTGCTGTGAAAATTCATTTACGTATCAGCATTGCACGAGCTACTCAGCATCGCAGCATTGATATCTCCTTGGAAGCAGTGGGAGTTGGGTCGGATGGTCGAAAATGGAGTTTTCCTGTCCAGCTCTTTAATCTAGCGTAG 1857 44.16 MQMDSTSFPDHRASMPVLADDDDHDNAFASDLWDDWSSDDAHFPASSFLCLFCDLSFQSSSSLFEHCISSHHFHFYASRKALALDFYGSIKLVNYIRSQVAQNRCWCCGLLCPSKLDLLNHMHEPLSFEAIKPLLDEDKYLKPFLQNDSLLYSFDDEDEVGQEEFQKVDYHVELMNDMKYVGGLCIDEEITERELAFNVTNMDANGRVNSAPTSFSHLDAACSDIAPCKTKQHGEQSRVSIENLARKDAKILNESYFGAYSSFGIHREMLSDKVRMEAYSKAILQNPSLLNNAVVMDVGCGSGILSLFAAKAGASKVIAVEASGKMATVATQIAKDNGLWKNGSQDEDGVVEVVQGMVEELDKSIQIQPRSVDVLVSEWMGYCLLYESMLSSVLFARDHWLKPGGAILPDTASIFVAGFGKGGTSLPFWENVYGFDMSCIGKELASDAAKIPIVDVVDAHDIVTIPAILHTFDLARMEADEVDFTACTELEPSLGSNLGDLESRMWCHGIVLWFDTGFTSRFCREMAATLSTSPFTPSTHWAQTVLTFREPIALSLKGSGNGGSLHVGTEECPAVKIHLRISIARATQHRSIDISLEAVGVGSDGRKWSFPVQLFNLA 618
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 22498380 22502163 + Bpe016345.1 Bpe04g01626 103435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g01626 618 Gene3D - 412 609 - -
Bpe04g01626 618 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 260 555 IPR029063 -
Bpe04g01626 618 Pfam C2H2 type zinc-finger (2 copies) 50 124 IPR041661 -
Bpe04g01626 618 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 3-RELATED 18 617 - -
Bpe04g01626 618 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 18 617 IPR025799 GO:0016274|GO:0018216
Bpe04g01626 618 CDD AdoMet_MTases 295 408 - -
Bpe04g01626 618 Pfam Methyltransferase domain 295 405 IPR041698 -
Bpe04g01626 618 Gene3D Vaccinia Virus protein VP39 245 409 IPR029063 -
Bpe04g01626 618 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 253 576 IPR025799 GO:0016274|GO:0018216
Bpe04g01626 618 SUPERFAMILY beta-beta-alpha zinc fingers 31 159 IPR036236 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01626 Bpe-Chr4:22498380 Bpe13g01260 Bpe-Chr13:17821170 1.54E-46 dispersed
Bpe04g01621 Bpe-Chr4:22418699 Bpe04g01626 Bpe-Chr4:22498380 8.27E-53 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g01626 K11436 - qsu:112021718 741.495