Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe04g01628 | ATGAGGAAGAAGCTTGATACCCGTTTTCCCGCTGCTCGCATTAAAAAGATAATGCAGGCAGATGAGGATGTTGGAAAGATAGCATTAGCAGTTCCTGTCTTAGTTTCTAAAGCTTTGGAGTTGTTTTTGCAAGACCTTTGTGACCGTACATATGAGATCACCCTTCAGAGGGGTGCAAAAACAATGAGCTCATTGCATTTAAAGCACTGTGTACAAAGCTATAACGTGTTTGATTTCCTGAGAGAAGTTGTTAGCCGGGTTCCTGACTATGGTCACGCTCACCCCGATGCTGCATCTGAAGATCGGAAGAAAAGGAAACCCACTGTTGAAGAAAACAATGACAGTGACGAGGAATTAAGAAAGAGCAAGATGCAGGAGATGAGCCATGGCAGCAGCAGTGGGAGAGGAAGAGGCAGAGGTCGAGGACGAGGCCGTGGACGCAGCAGCCGAAATGCAGAAAGAGACACCATCCAGCACGAGGTTGAGGCTGACCCTTGCACATCGCATCAGCCTGGTAAAAATGAGTTGAACCAAAATATTGATAATGATTGTGGGTCAAAGCAAGTGGCAAAAGAAGCCATCCTTCCGAGCGATGCATCAGATGCAGCCCCTTCAAGCATTGACCTAAATTCTGACTTGAACATGAACGAGGACTCTAAAAACACCGCAGCGGAACCTCCGGCACCAGCACCTGAACCAATTGAGGAGCCTGAACACGAAGAATACCCTGGGTGGTCTCTATCTGGTGTAAACAAGATGGCCATTGATCCACTTCAGCTTGCGCAGCTTGGTAAGAGGTTGGATGAGGACGATGAAGACTATGATGAGGAAGAGTAG | 837 | 47.43 | MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMSSLHLKHCVQSYNVFDFLREVVSRVPDYGHAHPDAASEDRKKRKPTVEENNDSDEELRKSKMQEMSHGSSSGRGRGRGRGRGRGRSSRNAERDTIQHEVEADPCTSHQPGKNELNQNIDNDCGSKQVAKEAILPSDASDAAPSSIDLNSDLNMNEDSKNTAAEPPAPAPEPIEEPEHEEYPGWSLSGVNKMAIDPLQLAQLGKRLDEDDEDYDEEE | 278 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 22520131 | 22528505 | + | Bpe016347.1 | Bpe04g01628 | 103437 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe04g01628 | 278 | SUPERFAMILY | Histone-fold | 4 | 89 | IPR009072 | GO:0046982 | |
Bpe04g01628 | 278 | MobiDBLite | consensus disorder prediction | 146 | 162 | - | - | |
Bpe04g01628 | 278 | Coils | Coil | 260 | 278 | - | - | |
Bpe04g01628 | 278 | MobiDBLite | consensus disorder prediction | 170 | 185 | - | - | |
Bpe04g01628 | 278 | Gene3D | Histone, subunit A | 1 | 86 | IPR009072 | GO:0046982 | |
Bpe04g01628 | 278 | PANTHER | HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED | 1 | 277 | - | - | |
Bpe04g01628 | 278 | MobiDBLite | consensus disorder prediction | 90 | 125 | - | - | |
Bpe04g01628 | 278 | Pfam | Histone-like transcription factor (CBF/NF-Y) and archaeal histone | 8 | 71 | IPR003958 | - | |
Bpe04g01628 | 278 | PANTHER | HISTONE SUPERFAMILY PROTEIN | 1 | 277 | - | - | |
Bpe04g01628 | 278 | MobiDBLite | consensus disorder prediction | 203 | 221 | - | - | |
Bpe04g01628 | 278 | MobiDBLite | consensus disorder prediction | 90 | 248 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe01g00338 | Bpe-Chr1:2125765 | Bpe04g01628 | Bpe-Chr4:22520131 | 2.68E-63 | dispersed | |
Bpe04g01628 | Bpe-Chr4:22520131 | Bpe11g01366 | Bpe-Chr11:10229589 | 2.69E-11 | dispersed | |
Bpe04g01628 | Bpe-Chr4:22520131 | Bpe15g00914 | Bpe-Chr15:18944838 | 2.72E-11 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
21358 | PF00808 | CBFD_NFYB_HMF | 4.10E-19 | CL0012 | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe04g01628 | K21752 | - | fve:101315090 | 319.701 |