Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g01634 GCCATGAGCTCGTTCCAAATATCTGAGGAAATTGGATTTGACAGTAATCTGGAGGCTCTATCTCAGCCTCCCATCCAAGAACAGGATATGGGGGAGGATGATTATAGTGATGAAGAGATGGAGATTGAGGAGCTGGAGAGAAGAATGTGGAGAGATCGAATCCTATTGAAGCGACTCAAAGAACAAAGCAAGGAAAAGGAAGGGCTGCAAAATTTGAAGAAGAGTCAATCGCAAGAGCAAGCTCGGAGGAAGAAGATGTCGAGAGCGCAAGATGGTATATTGAAATATATGTTGAAAATGATGGAAGTGTGTAAAGCCCAAGGATTTGTGTACGGAATAATTCCGGAGAACGGAAAGCCAGTGAGTGGGGCTTCCGATAATCTCCGAGCTTGGTGGAAGGAAAAGGTTCGATTCGATCGTAATGGCCCAGCTGCTGTTTCTAAATATCAAGCAAACCATATTGATGGCTTCGATGATTATGATGTCGAAGGAGTAGATGATGAATCAACTGCTGAAGTAGAGGAACACAAGTCCCTTGATATGAAGATGAGTGGACCTAGGGATTCAATCATAATGCCTCCATTGGCTTCCAAAATTAAAGGAGACCCCATGGAGAACACTTTTGATATTATCCAAAAGAGGAAGCAACCCATTGACGAGATAATTATGATGGTGGATCGGAAGATATTTACTTGTGGGCATATAAAATGCCCGTACAGTGATTATCGTCTCGGCTTTCTTGATATTACTTCAAGAAACAATCACCAGCTCAATTGCCCGTTTCGGAGTAATTTGTCAAATTTTCAGACTAACAATGTTAGGTCGACACCAGTTTCTCTACCATTGAATCAGACTCCATCCTTCCATGTTTCAGGTCTGGACCTTCCAGAGGATGGACAAAAAATAATCGCTGATTTGATGACAGTCTATGATTGTAACATTCAACGAATCAAAAACTCTAATCCAGGGAATCTTGAGGAAATGGATGAGCTCAAAGAGGAGCCAAAGCTCTGTTTTCAGGTCGAAAGCAACTTGTATAGTCATGGTGTAACCGTAGGAAGAAATGTGTCTCAAGAAACAAATGTTCACACTGATTTAACGTCCCTGGAAATTCCAGACAATGGGAGCAGGACATTTGAGAGCAATCAGAATGATGATATTGTGGATTTTAGGTTTGATTCTCCATATGACTTTTCATCAGTCGATTATCCAGTTGATCCCTCGTTGCTGAAGCAAGACATCTCCTTGTGGTACCTTTGA 1260 41.75 AMSSFQISEEIGFDSNLEALSQPPIQEQDMGEDDYSDEEMEIEELERRMWRDRILLKRLKEQSKEKEGLQNLKKSQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPENGKPVSGASDNLRAWWKEKVRFDRNGPAAVSKYQANHIDGFDDYDVEGVDDESTAEVEEHKSLDMKMSGPRDSIIMPPLASKIKGDPMENTFDIIQKRKQPIDEIIMMVDRKIFTCGHIKCPYSDYRLGFLDITSRNNHQLNCPFRSNLSNFQTNNVRSTPVSLPLNQTPSFHVSGLDLPEDGQKIIADLMTVYDCNIQRIKNSNPGNLEEMDELKEEPKLCFQVESNLYSHGVTVGRNVSQETNVHTDLTSLEIPDNGSRTFESNQNDDIVDFRFDSPYDFSSVDYPVDPSLLKQDISLWYL 419
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 22552675 22554399 + Bpe016352.1 Bpe04g01634 103443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g01634 419 PANTHER ETHYLENE INSENSITIVE 3-LIKE 1 PROTEIN 21 154 - -
Bpe04g01634 419 MobiDBLite consensus disorder prediction 63 86 - -
Bpe04g01634 419 Pfam Ethylene insensitive 3 43 154 IPR006957 GO:0005634
Bpe04g01634 419 MobiDBLite consensus disorder prediction 13 38 - -
Bpe04g01634 419 Gene3D - 75 153 IPR023278 GO:0003700|GO:0005634
Bpe04g01634 419 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 154 418 IPR006957 GO:0005634
Bpe04g01634 419 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 21 154 IPR006957 GO:0005634
Bpe04g01634 419 PANTHER ETHYLENE INSENSITIVE 3-LIKE 1 PROTEIN 154 418 - -
Bpe04g01634 419 Coils Coil 28 79 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01634 Bpe-Chr4:22552675 Bpe08g01163 Bpe-Chr8:13394047 1.05E-40 dispersed
Bpe04g01634 Bpe-Chr4:22552675 Bpe11g00969 Bpe-Chr11:7213564 3.76E-112 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21361 PF04873 EIN3 1.30E-54 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g01634 K14514 - vvi:100250496 264.618