Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g01652 ATGTTGAGGATGGAAAAGGATTTCGATACCAAGTTGAGAATTCAGAGGAAATCTTCTAATGAAGGGAACGTTCAAAGATCTAAGAGCTTTGCTTTTCGAGCTCCACAGGAGAGTTTCACGATTCAGGATTTTGAATTGGGCAAAATCTATGGCGTTGGTTCTTATTCCAAGGTTGTGAGGGCGAAGAAGAAGGATACAGGAACAATCTATGCAATGAAGATAATGGACAAAAAGTTCATCACCAAAGAAAACAAAACTGCTTATGTCAAGCTAGAACGCATTGTGCTCGATCAGTTGGATCATCCTGGCGTTGTGCGACTATTTTTCACGTTTCAAGACACCCTTTCACTCTATATGGCTCTTGAATCCTGCGAAGGTGGAGAACTTTTTGACCAAATAAACAGGAAAGGTCGCTTGCCAGAAGATGAAGCTCGGTTCTATGCTGCCGAAGTTGTGGATGCTCTTGAATATATACATAGTATGGGACTGATTCACCGGGATATTAAGCCCGAAAATTTGCTTCTCACTGCTGATGGACATATTAAAATTGCTGATTTTGGAAGCGTGAAGCCTATGCAGGATAGTCGAATTACTGTTCTTCCAAATGCAGCATCAGATGACAAAGCTTGTACATTTGTGGGGACAGCAGCATATGTTCCTCCAGAAGTCCTCAATTCGTCCCCTGCAACTTTTGGAAATGACCTGTGGGCACTTGGTTGCACCCTGTACCAGATGCTTTCAGGCACTTCTCCTTTCAAAGATGCAAGTGAATGGCTCATTTTCCAAAGAATTATAGCTAGAGAGATAAGGTTTCCAAATTACTTTTCGGAGGAAGCTAAAGATCTTATCGACCGCTTGCTGGATATTGATCCCAGCTGCAGACCCGGTGCAGGAGCTGAAGGTTATGGTGTACTGAAGATGCATCCCTTTTTTGAGGGAGTGGATTGGAAGAATATTAGAGCTCAAAAACCACCAAAAGTTGCTTTGCAAGCTTTGGTAAGACTTCATATTCCTCTTGGAAAAATCCACCAGGCTGTGAATACTGATTTTTCTCATTCTGTGAGTCTTCAGGTCTCGTCAGGCGAAGGTAGTGGTAAAGTTCATGATTCTTCATGGAACCCTGCCTATGGTGGGGATGGTGCAGGCGGAAATTATGATGGCCTTGGATCATCGTCTGAAGCCTCCGGACATATCACTAGGCTTGCCTCGATCGACTCATTCGATTCTAAGTGGCAACAGTTCCTTGAAGCTGGAGAATCAGTCCTAATGATCTCAATGGTGAAGAAAATTCAGAAGCTTTCCAGCAAAAAAGTGCAGCTTATCCTCACCAATAAACCAAAACTATTTTATGTAAATCCTTCCAAGCTGAATGTAAAAAGGAACATAATATGGTCTGACAATCGAACCGACTTGAGCGTCCAAGTCACGAGTCCTTCCCAATTCAAGATCTGCACGCCGAAAAAGATCTTATCGTTTGAGGATTCGAAGCAGAGGGGATGGCAGTGGAAGAAGGCGATCGAGACGCTTCAGAGTCGGTGA 1539 43.34 MLRMEKDFDTKLRIQRKSSNEGNVQRSKSFAFRAPQESFTIQDFELGKIYGVGSYSKVVRAKKKDTGTIYAMKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTLSLYMALESCEGGELFDQINRKGRLPEDEARFYAAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDASEWLIFQRIIAREIRFPNYFSEEAKDLIDRLLDIDPSCRPGAGAEGYGVLKMHPFFEGVDWKNIRAQKPPKVALQALVRLHIPLGKIHQAVNTDFSHSVSLQVSSGEGSGKVHDSSWNPAYGGDGAGGNYDGLGSSSEASGHITRLASIDSFDSKWQQFLEAGESVLMISMVKKIQKLSSKKVQLILTNKPKLFYVNPSKLNVKRNIIWSDNRTDLSVQVTSPSQFKICTPKKILSFEDSKQRGWQWKKAIETLQSR 512
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 22632703 22636539 + Bpe016369.1 Bpe04g01652 103461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g01652 512 CDD STKc_PDK1 42 311 IPR039046 GO:0004674
Bpe04g01652 512 SMART serkin_6 44 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe04g01652 512 Gene3D - 390 512 IPR011993 -
Bpe04g01652 512 PANTHER SERINE/THREONINE-PROTEIN KINASE 18 508 - -
Bpe04g01652 512 Gene3D Phosphorylase Kinase; domain 1 42 127 - -
Bpe04g01652 512 PANTHER 3-PHOSPHOINOSITIDE-DEPENDENT PROTEIN KINASE 1 18 508 - -
Bpe04g01652 512 SUPERFAMILY Protein kinase-like (PK-like) 25 333 IPR011009 -
Bpe04g01652 512 Gene3D Transferase(Phosphotransferase) domain 1 128 324 - -
Bpe04g01652 512 Pfam PH domain 409 510 IPR033931 -
Bpe04g01652 512 Pfam Protein kinase domain 46 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe04g01652 512 ProSiteProfiles Protein kinase domain profile. 44 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe04g01652 512 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672|GO:0006468
Bpe04g01652 512 SUPERFAMILY PH domain-like 305 511 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01652 Bpe-Chr4:22632703 Bpe12g00570 Bpe-Chr12:11520406 1.85E-64 dispersed
Bpe04g01652 Bpe-Chr4:22632703 Bpe04g01911 Bpe-Chr4:24079830 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63335 PF00069 Pkinase 6.10E-66 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g01652 K06276 - tcc:18586587 810.061