Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g01683 ATGATGGAGGCTCCGCTGAGTCCTGCGGGAGGGAGTCACGAAAGTGGGGGAGATCGGAGTCCGAAAGCCGGAATGCGGGAGCATGATCGATTCCTTCCTATTGCTAATATTAGTCGGATCATGAAGAAGGCCTTGCCTGCCAATGGAAAGATCGCTAAGGACGCTAAGGATACCGTCCAGGAATGCGTTTCCGAATTCATCAGCTTCATTACCAGCGAGGCGAGCGACAAATGTCAAAAGGAGAAGAGGAAGACTGTTAATGGCGATGATTTACTGTGGGCAATGGCAACTCTGGGTTTCGAAGATTATATAGTGCCGCTTAAAGTGTACTTATCTAGGTACAGGGAGTTGGAGGGTGACACTAAAGGGCAGGCTAGAGGGGGAGATGGATCTGCTAAAAAGGATGGAGTTGGAATATTGCCTGGTCAAAATGCTCAGCTCCCACTGCAGGGCCAGCATCTGATGTTTCCTTCAATACGAAACTACGAGTAG 492 49.39 MMEAPLSPAGGSHESGGDRSPKAGMREHDRFLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTVNGDDLLWAMATLGFEDYIVPLKVYLSRYRELEGDTKGQARGGDGSAKKDGVGILPGQNAQLPLQGQHLMFPSIRNYE 163
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 22804541 22805709 - Bpe016399.3 Bpe04g01683 103492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g01683 163 Gene3D Histone, subunit A 20 153 IPR009072 GO:0046982
Bpe04g01683 163 MobiDBLite consensus disorder prediction 1 25 - -
Bpe04g01683 163 PRINTS CCAAT-binding transcription factor subunit A signature 78 96 - -
Bpe04g01683 163 PRINTS CCAAT-binding transcription factor subunit A signature 97 115 - -
Bpe04g01683 163 PRINTS CCAAT-binding transcription factor subunit A signature 59 77 - -
Bpe04g01683 163 ProSitePatterns NF-YB/HAP3 subunit signature. 62 78 IPR003956 GO:0005634|GO:0006355|GO:0043565
Bpe04g01683 163 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-2-RELATED 1 152 - -
Bpe04g01683 163 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 1 152 IPR027113 GO:0001228|GO:0006355|GO:0016602
Bpe04g01683 163 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 31 95 IPR003958 -
Bpe04g01683 163 SUPERFAMILY Histone-fold 29 134 IPR009072 GO:0046982
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe04g01683 Bpe15g01076 CCT
Bpe04g01683 Bpe15g01076 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01683 Bpe-Chr4:22804541 Bpe07g00646 Bpe-Chr7:13218659 1.08E-58 dispersed
Bpe15g01076 Bpe-Chr15:19984528 Bpe04g01683 Bpe-Chr4:22804541 3.49E-64 wgd
Bpe04g00707 Bpe-Chr4:4554977 Bpe04g01683 Bpe-Chr4:22804541 1.03E-66 wgd
Bpe04g01683 Bpe-Chr4:22804541 Bpe04g01866 Bpe-Chr4:23814893 5.19E-88 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21368 PF00808 CBFD_NFYB_HMF 4.30E-28 CL0012 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g01683 K08065 - cpap:110824235 269.24