Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g01698 ATGGTAGATGCAGAGGATGCGTCTGGACATGCTTCAGCTCCGTCCCAAGCCCCTGGTTCCCGGAAAATATTCTGGCGCTCAGCATCGTGGTCCACATCACGGTCCTTTCCTCATAACCCTGATAAAGAGGAATTAGAAGGAGCGGATCCAAATGGTAATAGTGGTAACGGCAATGGAACAGGCAGAAGATTTCCTGCTCCTGTTACCCCCAGATCTCAACACAATAGCAAGGGAAGGCCATGTTTGCCGCCTTTGCAGCCCTTGTCGATTGCTCGCCGTAGCCTGGATGAGTGGCCAAAGGCTAGTTCGGACGATGTTGGTGAGTGGCCATTACCTTCTACTCCAAGTGGGAGGGGGAACGCGGAAAGATTAAAGCTTGATTTGTCAACAATTCAGAAAGTTCAGGACAAGAATGGTGGGCTTGTGAAGAGGGATAAAATTGCTTTCTTCGACAGAGAATGTTCAAAAGTAGAAGAACACGTTTATCTCGGCGGGGATGCAGTTGCTCGAGATAGGGATATTCTTCATCAGAATGGAATCACTCATATTTTAAATTGCGTGGGATTTGTTTGTCCTGAGTACTTTAAAACGGATTTTACTTACAGAACTTTATGGTTGCAGGATAGTCCTTCTGAGGATATTACTAGTATTTTATATGATGTTTTTGACTACTTCGAGGATGTTAGAGAGCTAGGTGGAAGGGTGTTTGTTCATTGTTGCCAAGGGGTTTCTCGGTCCACGTCGTTGGTGATTGCCTATCTAATGTGGAGGGAAGGTCAGAGTTTTGATGATGCATTTCAGTATGTAAAGGCAGCCAGAGGAATCGCTGATCCAAATATGGGTTTTGCTTGCCAGTTATTACAGTGCCAAAAAAGAGTTCATGCATTTCCTTTAAGTCCAAGCTCACTACTGAGGATGTATAGAATTGCTCCACACTCACCGTACGATCCTTTGCATCTCGTGCCAAAAATGTTAAATGATCCTTCTCCTTGTGCATTAGATTCAAGGGGTGCATTTATTATTCACATACCATCTGCAATATATCTTTGGGTTGGCAAAAAATGTGAGGCGATCATGGAAAGAGACGCCAGAGGGGCTGCTTGTCAGATTGTTCGGTATGAGAAAGTGCAAGGGTCCATAACAGTCATTAAAGAAGAAAAGGAGCCAGCTTCCTTTTGGGATGCCTTTTCAAGCCTATTGCCTTTGATGTATAAATCTGGGAATGGAGTTAATGTTGGGGAATCAAAGGTTGAGATCTCCCCAGTGGAGAGAAAGGTGGATTCATATAACGTTGATTATGAGATTTTCCAGAAAGCTATTTCGGGTGGTTTTGTACCTCCTTTTGCATCATCAGAAAATGAACATGAAACCCATCTTCCTGCCAGAGAAAGCAGTTGGAGCATGTTAAGGAGAAAGTTTGCTTCTGGTCATATGAAAGAGTTTGTGTCAGCACCCAAAATGGCTCTTTCCCGGGTTTATTCAGATTCTAAGATAGTGATACTTTCTTCTGCGAAGCCTTTGTCGCCACCATCATCATCATCTTCATCATCACTACACTCATCTGTATCTTCCTTTTATTCACCTATTTATCTCTCTCCTGATTCCATCTCCTCTGATACCAGCACAAGTTCAAAGTATTTTTCAGAGAGCTCCCTTGATTCTCCATCTGAAGCTTTACCTTCAGTTCCATCATCTACAACTATGTCCAGCTTGTGTAACATGTCCCTCCACTCATCCAAAAACTCATCTCTTCCCATTCCCAACGGTCCAGAAGTTCCTGGTGCAATGATGACTTCAAAAACAAGTATTCAGTCATCCTCAAAGAAAAAGTTGTCTCCTTCACTTGCCGAACGGCGAGGTAGCTTGTCAAAATTTCTTAAGCTTCCAAAGATGTCTGATAACTTGAGGGTGACCAATAATTACCCAAGTTTTCGTTCCAGTGAAGGGGATGATGACAAAGATAGGGTGAAAAAAGCTCCTTGCTCTTTTCATGATCCAAATAACTTAGAATATGCCATAGACCCTAGAGATAGTGATGTAAATTCTGAGGCAGATTTAAGTAAAACATGCAATAATCATAGTGAAAATAGTGGCCACCAAAGAGAAAAATGTCAGGATGCATACCAGACTGAAAAAACTGCCGAAAGTTGTGGCAAACTGTGTAGACAACATTCAATACCTGTAGAGGAAGGCCAAGGAACCAGAGCATCAAATAAAGTGAAAGATGGTCCCTCTGTATGTAATCTTTTGAAACAACCCTTGGTATACAGCTGGCCTGGATTGGAAAAGATTGCAATGTTTAGTGCGAGTGATCTGGATTCTAAAGCTGCTTTTGCTATTCTCTCTGCCAGTGGAGACATTATTAAAAATGATGGCAGGATTCTGTATTTTTGGGTTGGACGTTCTTTTGACCATCATAAATGTCAGAGTAAGGTTGATGCAAGCGAGGAGTTAGATTGTCAAGAACAGATTGATTGGAATAGATCTATTCGTTTTGTTCTTGCTGAACTTGATCTGCCAGATGATATTGTGACTAAGGTACCAAAATTTAACACTTGCAATCTTTTTATTTGGTTCTTAAATCTCGGGCGAACGTAG 2598 42.11 MVDAEDASGHASAPSQAPGSRKIFWRSASWSTSRSFPHNPDKEELEGADPNGNSGNGNGTGRRFPAPVTPRSQHNSKGRPCLPPLQPLSIARRSLDEWPKASSDDVGEWPLPSTPSGRGNAERLKLDLSTIQKVQDKNGGLVKRDKIAFFDRECSKVEEHVYLGGDAVARDRDILHQNGITHILNCVGFVCPEYFKTDFTYRTLWLQDSPSEDITSILYDVFDYFEDVRELGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQYVKAARGIADPNMGFACQLLQCQKRVHAFPLSPSSLLRMYRIAPHSPYDPLHLVPKMLNDPSPCALDSRGAFIIHIPSAIYLWVGKKCEAIMERDARGAACQIVRYEKVQGSITVIKEEKEPASFWDAFSSLLPLMYKSGNGVNVGESKVEISPVERKVDSYNVDYEIFQKAISGGFVPPFASSENEHETHLPARESSWSMLRRKFASGHMKEFVSAPKMALSRVYSDSKIVILSSAKPLSPPSSSSSSSLHSSVSSFYSPIYLSPDSISSDTSTSSKYFSESSLDSPSEALPSVPSSTTMSSLCNMSLHSSKNSSLPIPNGPEVPGAMMTSKTSIQSSSKKKLSPSLAERRGSLSKFLKLPKMSDNLRVTNNYPSFRSSEGDDDKDRVKKAPCSFHDPNNLEYAIDPRDSDVNSEADLSKTCNNHSENSGHQREKCQDAYQTEKTAESCGKLCRQHSIPVEEGQGTRASNKVKDGPSVCNLLKQPLVYSWPGLEKIAMFSASDLDSKAAFAILSASGDIIKNDGRILYFWVGRSFDHHKCQSKVDASEELDCQEQIDWNRSIRFVLAELDLPDDIVTKVPKFNTCNLFIWFLNLGRT 865
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 22896576 22899173 + Bpe016413.1 Bpe04g01698 103507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g01698 865 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 147 294 IPR029021 -
Bpe04g01698 865 MobiDBLite consensus disorder prediction 595 611 - -
Bpe04g01698 865 MobiDBLite consensus disorder prediction 1 121 - -
Bpe04g01698 865 PANTHER PROTEIN-TYROSINE-PHOSPHATASE MKP1 1 848 - -
Bpe04g01698 865 MobiDBLite consensus disorder prediction 637 703 - -
Bpe04g01698 865 Gene3D Severin 304 399 IPR029006 -
Bpe04g01698 865 MobiDBLite consensus disorder prediction 646 661 - -
Bpe04g01698 865 ProSitePatterns Tyrosine specific protein phosphatases active site. 237 247 IPR016130 GO:0016311|GO:0016791
Bpe04g01698 865 Pfam Dual specificity phosphatase, catalytic domain 161 291 IPR000340 GO:0008138|GO:0016311
Bpe04g01698 865 MobiDBLite consensus disorder prediction 542 618 - -
Bpe04g01698 865 MobiDBLite consensus disorder prediction 542 586 - -
Bpe04g01698 865 SUPERFAMILY Actin depolymerizing proteins 300 405 - -
Bpe04g01698 865 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 212 273 IPR000387 GO:0016311|GO:0016791
Bpe04g01698 865 PANTHER MKPA PROTEIN 1 848 - -
Bpe04g01698 865 Gene3D Protein tyrosine phosphatase superfamily 129 295 IPR029021 -
Bpe04g01698 865 ProSiteProfiles Dual specificity protein phosphatase domain profile. 153 295 IPR020422 GO:0006470|GO:0008138
Bpe04g01698 865 CDD DSP 154 288 - -
Bpe04g01698 865 SMART dsp_5 153 292 IPR020422 GO:0006470|GO:0008138
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01698 Bpe-Chr4:22896576 Bpe12g00460 Bpe-Chr12:10343710 1.61E-18 dispersed
Bpe04g01185 Bpe-Chr4:13571777 Bpe04g01698 Bpe-Chr4:22896576 1.71E-25 transposed
Bpe04g01380 Bpe-Chr4:20435691 Bpe04g01698 Bpe-Chr4:22896576 2.45E-08 transposed
Bpe10g00796 Bpe-Chr10:14106451 Bpe04g01698 Bpe-Chr4:22896576 0 transposed
Bpe15g00162 Bpe-Chr15:12080494 Bpe04g01698 Bpe-Chr4:22896576 3.67E-13 transposed
Bpe15g01299 Bpe-Chr15:21264520 Bpe04g01698 Bpe-Chr4:22896576 9.35E-16 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g01698 - - zju:107404086 1021.54