Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g01713 ATGGCTGCGATGAGTGTACTGAGTATTGTCTCTTTAATAGCATTCATCGCAGTCGTTGATCAGGCAACAATTGCGGGAGCATCCACTGCTGTTGGAGCTTGGCAGGGAGCTCACGCTACCTTCTATGGCGGCAGCGACGCCTCTGGAACAATGGGAGGAGCGTGTGGTTATGGAAACTTGTACAGTCAAGGCTATGGAGTCAACACTGCTGCATTGAGCACAGCTCTGTTCAACAACGGGCAGAGCTGTGGAGCTTGCTTCGAGATAAAGTGCGCAAACGACCCAAAATGGTGTCATTCCGGCAGCCCTTCAATCTTCGTCACCGCCACCAACTTTTGCCCGCCAAACTACGCTCTACCAAACGATAACGGCGGCTGGTGTAACCCTCCTCGCACCCACTTCGACCTTTCTATGCCCGTTTTCCTCAAGATCGCCGAATATCGCGCCGGAATCGTCCCCGTATCTTATCGGAGAGTCCCCTGTAAAAAGCGAGGAGGCGTCAGATTCACGATCAATGGCTTCAGATACTTCAATTTGGTTTTGATCACCAACGTGGGTGGCGCCGGAGACATAGTGAGGGTTAGCGTGAAAGGGTCGAGGAGTGGGTGGATCAGCATGAGCCGGAACTGGGGTCAGAACTGGCAGTCCAACTCCGCTCTCGTCGGCCAGTCTCTCTCTTTCCAGCTCACCGCCAGCGACGGCCGCATCTCCACCTCATGGAACGTCGTTCCTTCCCATTGGCAATTCGGTCAAACTTTCACCGGCGAAAATTTCCAGTTTTAA 783 53.38 MAAMSVLSIVSLIAFIAVVDQATIAGASTAVGAWQGAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGQSCGACFEIKCANDPKWCHSGSPSIFVTATNFCPPNYALPNDNGGWCNPPRTHFDLSMPVFLKIAEYRAGIVPVSYRRVPCKKRGGVRFTINGFRYFNLVLITNVGGAGDIVRVSVKGSRSGWISMSRNWGQNWQSNSALVGQSLSFQLTASDGRISTSWNVVPSHWQFGQTFTGENFQF 260
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 22972599 22973464 - Bpe016426.1 Bpe04g01713 103522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g01713 260 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 176 255 IPR007117 -
Bpe04g01713 260 SUPERFAMILY PHL pollen allergen 163 255 IPR036749 -
Bpe04g01713 260 Pfam Expansin C-terminal domain 167 244 IPR007117 -
Bpe04g01713 260 PRINTS Expansin/Lol pI family signature 51 69 IPR007118 GO:0005576
Bpe04g01713 260 PRINTS Expansin/Lol pI family signature 203 217 IPR007118 GO:0005576
Bpe04g01713 260 PRINTS Expansin/Lol pI family signature 149 165 IPR007118 GO:0005576
Bpe04g01713 260 PRINTS Expansin/Lol pI family signature 73 91 IPR007118 GO:0005576
Bpe04g01713 260 PRINTS Expansin/Lol pI family signature 33 48 IPR007118 GO:0005576
Bpe04g01713 260 PRINTS Expansin/Lol pI family signature 241 255 IPR007118 GO:0005576
Bpe04g01713 260 SUPERFAMILY Barwin-like endoglucanases 33 184 IPR036908 -
Bpe04g01713 260 PANTHER EXPANSIN-A6 5 259 - -
Bpe04g01713 260 PRINTS Expansin signature 241 257 IPR002963 GO:0009664
Bpe04g01713 260 PRINTS Expansin signature 177 198 IPR002963 GO:0009664
Bpe04g01713 260 PRINTS Expansin signature 64 78 IPR002963 GO:0009664
Bpe04g01713 260 PRINTS Expansin signature 141 154 IPR002963 GO:0009664
Bpe04g01713 260 PRINTS Expansin signature 124 141 IPR002963 GO:0009664
Bpe04g01713 260 PRINTS Expansin signature 212 233 IPR002963 GO:0009664
Bpe04g01713 260 PRINTS Expansin signature 91 102 IPR002963 GO:0009664
Bpe04g01713 260 PRINTS Expansin signature 165 177 IPR002963 GO:0009664
Bpe04g01713 260 PRINTS Expansin signature 105 115 IPR002963 GO:0009664
Bpe04g01713 260 Pfam Lytic transglycolase 69 156 IPR009009 -
Bpe04g01713 260 Gene3D - 166 260 IPR036749 -
Bpe04g01713 260 Gene3D - 18 162 IPR036908 -
Bpe04g01713 260 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 52 166 IPR007112 -
Bpe04g01713 260 PANTHER EXPANSIN-A15 5 259 IPR002963 GO:0009664
Bpe04g01713 260 SMART dpbb_1 69 156 IPR007112 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe04g01713 Bpe04g01834 CCT
Bpe04g01834 Bpe04g01713 ECH
Bpe04g01713 Bpe04g01834 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g01037 Bpe-Chr3:29712682 Bpe04g01713 Bpe-Chr4:22972599 3.18E-153 dispersed
Bpe04g01713 Bpe-Chr4:22972599 Bpe13g01406 Bpe-Chr13:19294928 1.49E-126 dispersed
Bpe05g00621 Bpe-Chr5:20140121 Bpe04g01713 Bpe-Chr4:22972599 1.97E-92 dispersed
Bpe07g00136 Bpe-Chr7:970875 Bpe04g01713 Bpe-Chr4:22972599 6.97E-94 dispersed
Bpe11g01434 Bpe-Chr11:10660893 Bpe04g01713 Bpe-Chr4:22972599 4.06E-45 dispersed
Bpe04g00680 Bpe-Chr4:4313941 Bpe04g01713 Bpe-Chr4:22972599 3.15E-112 transposed
Bpe01g00128 Bpe-Chr1:758960 Bpe04g01713 Bpe-Chr4:22972599 3.80E-153 wgd
Bpe04g00743 Bpe-Chr4:4754375 Bpe04g01713 Bpe-Chr4:22972599 5.27E-157 wgd
Bpe04g01713 Bpe-Chr4:22972599 Bpe04g01834 Bpe-Chr4:23631699 8.55E-154 wgd
Bpe04g01713 Bpe-Chr4:22972599 Bpe08g00100 Bpe-Chr8:548069 5.87E-151 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g01713 - - qsu:112017318 461.455