Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g01716 ATGGCGAATTGGTGGTGGACTGGAAATGCCGCCATGAGAGGCAGGAGCCCTTTGTCATCTCCGCCGTCTCTTCATCTTAGAAACACAGAGGAAGATCATACCGAAAGGAGCCGATTCGGAAGCAGAAGAGAGGAAGAATTCATGGATATGAACCATAGCAACAATAACACAACTCCCACAAGCACGAAGAAGCGAATTCTTGTAGAGGACGAAGGCAATCGAGATTTTGATCCAGATACCGAAGATCCAAACTCCGGCGACCAAGAGAGTATTGAACTAGGCCCCGGAAACTCCAACCGCCGGCCTCGTGGCCGACCATCTGGGTCTAAGAACAAGCCGAAACCGCCGATTGTGATAACCAAAGAGAGCCCCAATACTCTCCGAAGCCATGTGTTGGAAATCAGCAGCGGCAGCGACATAGCGGACAGCATAGCCAACTTCTCGCAACGCCGACAACGAGGAGTCTCCGTTCTAAGTGGCAATGGCGTCGTCACCAACGTTACCCTCCGGCAATCCTCTGCGGCTACTGGAGTCCTCAATCTCCATGGAAGCTTCGAGATCTTGACTCTCACTGGCGCTTTTTTTCCAGCCCCATCTCCTCCTGGATCCTCTGGGCTGACTATTTACTTAGCAGGTGGGCAAGGTCAAGTACTTGGTGGCTCGGTGGTGGGCTCTCTAATGGCGGCTGGGCCAGTGATGGTGATTGTAGCAACGTTCACAAACGCGATATATGAGCGACTGCCGCTGGAGGATGAGGTTGGAACTGGAAGTGAGCAACATAACATGCAAGTAGAGCTGGGATCAGGCGGAGGCAGTTTAGATTCTCATGATGTCGGCGAGCAAGTTTCGACGACTCCGATGTATAATCTGCCCCCTAATTTGCTACCCAATGGTCCAAATCAGATCCCCCATGATTTGTTTTGGAGTTCTCCTCGCCCTCCATCTTCCTACTGA 954 51.89 MANWWWTGNAAMRGRSPLSSPPSLHLRNTEEDHTERSRFGSRREEEFMDMNHSNNNTTPTSTKKRILVEDEGNRDFDPDTEDPNSGDQESIELGPGNSNRRPRGRPSGSKNKPKPPIVITKESPNTLRSHVLEISSGSDIADSIANFSQRRQRGVSVLSGNGVVTNVTLRQSSAATGVLNLHGSFEILTLTGAFFPAPSPPGSSGLTIYLAGGQGQVLGGSVVGSLMAAGPVMVIVATFTNAIYERLPLEDEVGTGSEQHNMQVELGSGGGSLDSHDVGEQVSTTPMYNLPPNLLPNGPNQIPHDLFWSSPRPPSSY 317
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 23004462 23005415 - Bpe016429.2 Bpe04g01716 103525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g01716 317 CDD DUF296 128 239 IPR005175 -
Bpe04g01716 317 Gene3D - 127 262 - -
Bpe04g01716 317 MobiDBLite consensus disorder prediction 267 296 - -
Bpe04g01716 317 MobiDBLite consensus disorder prediction 1 124 - -
Bpe04g01716 317 SUPERFAMILY AF0104/ALDC/Ptd012-like 124 251 - -
Bpe04g01716 317 Pfam Plants and Prokaryotes Conserved (PCC) domain 128 241 IPR005175 -
Bpe04g01716 317 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 36 317 - -
Bpe04g01716 317 MobiDBLite consensus disorder prediction 64 81 - -
Bpe04g01716 317 ProSiteProfiles PPC domain profile profile. 124 261 IPR005175 -
Bpe04g01716 317 MobiDBLite consensus disorder prediction 277 291 - -
Bpe04g01716 317 MobiDBLite consensus disorder prediction 26 50 - -
Bpe04g01716 317 PIRSF ESCAROLA 31 316 IPR014476 GO:0003680
Bpe04g01716 317 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 36 317 IPR014476 GO:0003680
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe04g01716 Bpe04g01828 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00138 Bpe-Chr2:951701 Bpe04g01716 Bpe-Chr4:23004462 1.78E-44 dispersed
Bpe04g00800 Bpe-Chr4:5254590 Bpe04g01716 Bpe-Chr4:23004462 1.13E-88 dispersed
Bpe04g01716 Bpe-Chr4:23004462 Bpe05g00865 Bpe-Chr5:21849956 6.76E-72 dispersed
Bpe13g00567 Bpe-Chr13:12842623 Bpe04g01716 Bpe-Chr4:23004462 5.61E-61 dispersed
Bpe14g01239 Bpe-Chr14:9332880 Bpe04g01716 Bpe-Chr4:23004462 1.40E-63 dispersed
Bpe12g00160 Bpe-Chr12:1200266 Bpe04g01716 Bpe-Chr4:23004462 2.63E-71 transposed
Bpe15g01274 Bpe-Chr15:21146727 Bpe04g01716 Bpe-Chr4:23004462 0 wgd
Bpe04g01716 Bpe-Chr4:23004462 Bpe04g01828 Bpe-Chr4:23606257 1.79E-84 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g01716 - - qsu:112039774 334.339