Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g01718 ATGGCTGAGATTTGCTGTGAGCTTATTGGGGAAGGTGAAGCTCCGGCAGCTGTAGAGACCAGCTCTCTAGCTACAAGACGCCGGAGAATGGAGGCATGCCCTATTGCGTTGATGGCAGACGCTACTCTTCCTCCTCCGGCGACGGAGAACAGCCGAAAACGCCTGAAAACGGATGGTCCCCCGCGGGAGTGCGATAACGCTGTGGAGAATTGTACTCCTGCGACGAACAGGGTTGAGGAGAGAGATGGAGAAGATTCTAACGAGGGAAACTGTCATGAGAACCAATCAGTTTCTCTCTCCAACGCTTCGAATATCGGTATAATTGAGAATGAAATTATTTGGCGTCCTAAGTTCGGGGTGACTTCCATTCGTGGAAGGAGGAGAGAAATGGAAGATTCGGTGTCAATTCACCCATCTTTCTGCTCTCAGAAAGAAGAAGACACTGAAAAGCTCCATCTTTTCGGAGTATTCGACGGCCATGGTTGCTCTCATGTTGCGAAAAAGTGTCAAAAACGGTTACATGAGATTATAAAAGAAGAGATCAAACAAGGAGAGACGATGGACTGGAAGAAAACGATGGAGAAGTGCTATGTCCGAATGGACGAGGAGTTGAAGCAGCGTTCTAATGAAGTCAGAAGCTTTAATTGCAGGTGCGAACTTCAAGCTTCACAGAGCGATGCTGTTGGATCTACAGCTGTTGTAGCAGTTGTCACCCCCGAAAAAATCATCGTCTCTAATTGCGGCGACTCCCGGGCGGTGCTTTGCCGGAATGGGGTAGCAATCCCTCTCTCGTCCGATCACAAGCCTGATAGACCCGACGAACTGGAGCGAATAGAAGCCGCTGGCGGGCGGGTGATTTATTGGGACGGAGCAAGAGTACTCGGAGTTCTAGCGATGTCGAGAGCCATCGGAGATAACTACCTGAAACCTTACGTCATTCCGGTACCGGAGGTGACAATAACTGATCGGACGGCGGAGGACGAGTGTCTAATCATTGCAAGCGACGGTCTTTGGGACGTAGTGAAAAACGAGACGGCGTGTGGCGTGGCACGTATGTGTCTCCGGTCTCAGAGCTCAACCCAAGGGCCGTCAATACGATCGCCGGGAGTGGATTCTAGGGGTGATTGGTCGGACAAAACATGCTCCGACGCTTCGATTTTGCTGACGAAGTTGGCACTGGCGAGGCATAGTTCCGACAACATCAGCGTCGTTGTCGTCGATTTGAGGAAATAA 1233 50.77 MAEICCELIGEGEAPAAVETSSLATRRRRMEACPIALMADATLPPPATENSRKRLKTDGPPRECDNAVENCTPATNRVEERDGEDSNEGNCHENQSVSLSNASNIGIIENEIIWRPKFGVTSIRGRRREMEDSVSIHPSFCSQKEEDTEKLHLFGVFDGHGCSHVAKKCQKRLHEIIKEEIKQGETMDWKKTMEKCYVRMDEELKQRSNEVRSFNCRCELQASQSDAVGSTAVVAVVTPEKIIVSNCGDSRAVLCRNGVAIPLSSDHKPDRPDELERIEAAGGRVIYWDGARVLGVLAMSRAIGDNYLKPYVIPVPEVTITDRTAEDECLIIASDGLWDVVKNETACGVARMCLRSQSSTQGPSIRSPGVDSRGDWSDKTCSDASILLTKLALARHSSDNISVVVVDLRK 410
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 23010274 23011685 + Bpe016430.1 Bpe04g01718 103527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g01718 410 SMART PP2C_4 105 406 IPR001932 -
Bpe04g01718 410 PANTHER ALPHABET, ISOFORM E-RELATED 44 410 - -
Bpe04g01718 410 Gene3D - 113 410 IPR036457 -
Bpe04g01718 410 PANTHER PROTEIN PHOSPHATASE 2C 37 44 410 - -
Bpe04g01718 410 SUPERFAMILY PP2C-like 111 409 IPR036457 -
Bpe04g01718 410 MobiDBLite consensus disorder prediction 42 96 - -
Bpe04g01718 410 MobiDBLite consensus disorder prediction 75 89 - -
Bpe04g01718 410 Pfam Protein phosphatase 2C 118 400 IPR001932 -
Bpe04g01718 410 ProSiteProfiles PPM-type phosphatase domain profile. 117 408 IPR001932 -
Bpe04g01718 410 CDD PP2Cc 117 408 IPR001932 -
Bpe04g01718 410 ProSitePatterns PPM-type phosphatase domain signature. 153 161 IPR000222 GO:0043169
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00182 Bpe-Chr3:2223585 Bpe04g01718 Bpe-Chr4:23010274 1.98E-84 dispersed
Bpe03g00318 Bpe-Chr3:4653698 Bpe04g01718 Bpe-Chr4:23010274 1.72E-59 dispersed
Bpe04g01718 Bpe-Chr4:23010274 Bpe11g00748 Bpe-Chr11:5673131 2.63E-117 dispersed
Bpe01g00119 Bpe-Chr1:688960 Bpe04g01718 Bpe-Chr4:23010274 1.54E-123 wgd
Bpe15g01272 Bpe-Chr15:21139929 Bpe04g01718 Bpe-Chr4:23010274 0 wgd
Bpe04g01718 Bpe-Chr4:23010274 Bpe08g00091 Bpe-Chr8:499563 9.15E-130 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g01718 K14497 - egr:104454324 487.263