Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g01745 ATGTGCCTGGAGTCAAGTATTAAACTTCATCCCTCAAATTTTATCATGGAAAATGAACTTCTGAGCCAAAACAATGGAAATATCGTCAAGAGCTCGATTTTGCTTGAATTATCAGCCTCTGATGATCTCGATGCCTTCAGGAGAGAAGTAGAAGAGAAAGGGCTCCATATAAATGAGTTAGCGTATTGGTACAGCAGGAAAATTGGGTCTAGAAAGATGGGTTTCGAGGAAAGGACCCCACTTCTAATTGCAGCCATGTTTGCAAGTGCCAAGATTGTGAAATATATAATCGAAACTGGCAAAGTCGATGTGAATAAGGCATATGGTTCAGATAAGGTCACTGCTCTCCACTGTGCTGTTGCTGGTGGCTCAAGCCATTCAACTGAGATTATCAAACTCTTACTCGATGCATCTGCAGATGCTAGTTGTGTTGATTCTAATGGCAACAAGCCGGTTGATTTGATTACCCCCTCTATGAAATCATTTCCCAATCCAAGGAGGAAGGCAGTGGAGATGTTTCTGAAAGGTGATTATTTGAGTGGTGAAGTTACTCAAAGAAATGAGCACTTGGAAGATCAGCAGAAGCTTACTGAGAGGAAAGAATATCCTCTTGATGTTTCCTTGCCAGACATAAACACTGGAATTTACGGAACCGACGAGTTTAGAATGTATAGTTTTAAGGTTAAGCCTTGTTCAAGGGCGTATACTCATGATTGGACCGAATGCCCTTTTGCACATCCCGGCGAGAATGCAAGGCGGCGGGACCTAAGAAAATATCCATATAGTTGTGTTCCTTGTCCTGAGTTTCGCAAAGGGGCTTGCCAGAAAGGTGATGCCTGTGAATATGCTCATGGAGTCTTCGAGTCATGGCTTCACCCTGCACAGTACAAGACCAGAATCTGCAAGGACGAGATCAGATGTGGGAGGAAAGTATGCTTCTTCGCTCACAAGCCTGAAGAATTAAGGCCGGTCTATGCCTCCACGGGCTCGGCCTTGCCATCGCCTTGCTCACATTCTGTCAGTAGCCCAGAAATGGGGGCTTTGTCTCTTCCTGCTACTTCTACACCATCTATGTCTCCTTTGGGATCGGTCTCATCACCCATGAGTGCAGCCTTGTGGCAAAACAAAGTTACCCTTACACCTCCTACTTTGCAGTTGCCTGGTAGCCGACTGAAGACTTCTTCAAGCGTGAGAGATTTAGATTTCGAAAAGGAGTTGCTCAGCTTGGAAAATCGAACCAATCAACAGCAACAATATCAGCATTTAGTGGATGAAATTTCTCGTCTCTCCTCTCCTGCCTACCGGAGCAATGATTTTAGAAGGAACGGTGAACTGAAACTGACTAACTATTGTGATGTGTTTGGAAATTTGGATTCTCCTATGTTGTCTCAGCTGCAGGGCCTTTCACAATCAACGCCAACTCAATTGCAACATGGGCTTCAAACAAGCCAGAGAATGAATCAACTTGGATCAAGTTACCCAACAAAGCTCTCCTCTTCACCGGTGAGGAAACCTTCTCCATTTGGGCTCGACTCATCTGCAGCAGTGGCATCTGCCGTGATGAACTCCAGATCCTCACCCTCTGCAAAGCGGAGCCAGAGTTTCATTGATCGTGCGGCTCCAGCCCACCTTTCAGGGCTTACTGCCCCTTCAAATTTGTTGGCATGGGGCTCCCCAGATGGGAAATTAGATTGGAGCGTTCAAGGAGATGATCTAAATAAACTGAAAAAATCAGCTTCTTTTGGATTCAGAGCTAGAGCCACTGGCTCAATGCCATCTGCTCTCGACGAGCCAGACGTGTCGTGGGTCAACTCATTGGTTAAGGATGTGCCTTTGGAGAAATCCGGGTCTTTTGGTGCCGAGAAGCTGGCATACAGCCCTGGGGGTCTTGAGTTTCTTCCTTCTTGGGCGGAGCAGCTGTATGTAGAACAGGAGCAGATAGTAGCATAA 1950 46.0 MCLESSIKLHPSNFIMENELLSQNNGNIVKSSILLELSASDDLDAFRREVEEKGLHINELAYWYSRKIGSRKMGFEERTPLLIAAMFASAKIVKYIIETGKVDVNKAYGSDKVTALHCAVAGGSSHSTEIIKLLLDASADASCVDSNGNKPVDLITPSMKSFPNPRRKAVEMFLKGDYLSGEVTQRNEHLEDQQKLTERKEYPLDVSLPDINTGIYGTDEFRMYSFKVKPCSRAYTHDWTECPFAHPGENARRRDLRKYPYSCVPCPEFRKGACQKGDACEYAHGVFESWLHPAQYKTRICKDEIRCGRKVCFFAHKPEELRPVYASTGSALPSPCSHSVSSPEMGALSLPATSTPSMSPLGSVSSPMSAALWQNKVTLTPPTLQLPGSRLKTSSSVRDLDFEKELLSLENRTNQQQQYQHLVDEISRLSSPAYRSNDFRRNGELKLTNYCDVFGNLDSPMLSQLQGLSQSTPTQLQHGLQTSQRMNQLGSSYPTKLSSSPVRKPSPFGLDSSAAVASAVMNSRSSPSAKRSQSFIDRAAPAHLSGLTAPSNLLAWGSPDGKLDWSVQGDDLNKLKKSASFGFRARATGSMPSALDEPDVSWVNSLVKDVPLEKSGSFGAEKLAYSPGGLEFLPSWAEQLYVEQEQIVA 649
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
4 23157803 23159752 + Bpe016455.1 Bpe04g01745 103554
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g01745 649 Gene3D - 30 172 IPR036770 -
Bpe04g01745 649 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 29 17 647 - -
Bpe04g01745 649 MobiDBLite consensus disorder prediction 489 509 - -
Bpe04g01745 649 SMART ANK_2a 76 106 IPR002110 GO:0005515
Bpe04g01745 649 SMART ANK_2a 111 143 IPR002110 GO:0005515
Bpe04g01745 649 Pfam Ankyrin repeats (3 copies) 72 142 IPR002110 GO:0005515
Bpe04g01745 649 SUPERFAMILY Ankyrin repeat 32 153 IPR036770 -
Bpe04g01745 649 ProSiteProfiles Ankyrin repeat profile. 111 146 IPR002110 GO:0005515
Bpe04g01745 649 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 265 285 IPR000571 GO:0046872
Bpe04g01745 649 SMART c3hfinal6 260 286 IPR000571 GO:0046872
Bpe04g01745 649 SMART c3hfinal6 295 318 IPR000571 GO:0046872
Bpe04g01745 649 ProSiteProfiles Zinc finger C3H1-type profile. 260 287 IPR000571 GO:0046872
Bpe04g01745 649 Gene3D - 261 323 - -
Bpe04g01745 649 PANTHER UNKEMPT FAMILY MEMBER 17 647 IPR045234 -
Bpe04g01745 649 MobiDBLite consensus disorder prediction 489 506 - -
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Bpe04g01745 Bpe15g01163 CCT
Bpe04g01745 Bpe15g01163 ECH
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01745 Bpe-Chr4:23157803 Bpe11g00093 Bpe-Chr11:651152 5.39E-135 dispersed
Bpe15g01163 Bpe-Chr15:20490445 Bpe04g01745 Bpe-Chr4:23157803 0 wgd
Bpe15g01239 Bpe-Chr15:20940315 Bpe04g01745 Bpe-Chr4:23157803 0 wgd
Bpe04g01745 Bpe-Chr4:23157803 Bpe08g00070 Bpe-Chr8:378670 2.64E-179 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21371 PF12796 Ank_2 4.30E-07 CL0465 Bpe TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g01745 - - qsu:112011943 840.876