Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g01773 ATGAGGCTGCTCCTGTTGAAGATGCGGAATCTGGGTGAGGTGCTCATCTTGTTACTATTGGCTCCGGTTTTCGCGCGCGGTCTGAATCCCCCTCTGAACGATGATGTCTTGGGACTCATAGTGTTCAAGGCCGACATTCAAGATCTGAAGGGGAATCTTGCCTCATGGAATGAAGACGATGATTGTCCGTGTAACTGGGTCGGTGTGCAATGTAACCCGAGATCCAAGCGGGTCACTGAGCTCAACCTTGCCGGATTCTCCCTCTCCGGTCGTCTAGGCCGAGGCCTTGTTCAGCTACAGTTTCTGCGAAAGCTATCGCTCTCAGACAACAATCTCACCGGAAATGTAGGCCCTAACATTGCACGGATCAATAATCTCCGAGTGATCGATTTGGGGAACAACGGCTTTTCAGGGAGTTTACCTAACGATTTCTTCAACCAATGTGGGTCTTTGAGAGTGGTTTCTCTGGCCGGGAACAAATTTTCAGGGAAAATCCCTGACAGTTTAACCTCATGCGCTGTTCTCGCAGCACTTAACTTATCATCTAATCAGTTCTCTGGTTTATTACCTTCTGGAATTTGGTCCCTAAGTGGACTTCGCTCGCTTGATTTGTCGGATAATCTATTAGAGGGTAACATTCAGAAGGAGGTCGAAGGCTTGAATAATTTGCGAGCTATTAACTTGAGTAAGAACCGATTTTCTGGTCAGATTCCCGATGGAATCGGAAATTGTTTGCTCTTGCGCTCCATAGACCTCAGTGAGAATTCGTTTTCCGGCAACCTTCCAGACACCCTCCGGCAACTTTCTCTGTGTCATAATTTAAAGTTGCCGAAGAACTCATTCGTTGGCAAAGTTCCTGACTGGATACAAGAAATGAAAAGTCTAGAGACGGTGGATCTTTCGGCAAACACATTTTCGGGTCAGGTTCCTGATTCAGTCGGAAATCTCCCCTCGCTCAAGGTATTGAATTTTTCAAGTAATGGCTTTACTGGTAGTTTACCGGAGTCTCTGATTAATTGCCAGAGCTTAATGGTCTTAGATTTCAGTCATAATTCTATCTCCGGTGATTTCTCTACCTGGATTTCCAAAATGGGCTCACAAAATCTCTTGCTTTCAGAGAGCAAGCAGAGCAGAAGCCCTACTAGTTCGATATCTACTGTATCTGAGAAATCACTTCCAAATCTTCAAATCTTGGACCTATCTCACAATGCTTTCTCTGGTGTAATGGCGCCTGACATTGAGATTTTTGACAACCTGCAGCTCTTAAACTTGGCCGGAAATTCTCTCGCCGGCAATATTCCAAAATCCATCGGAGGTCTGACGGCCCTGGATACACTTGATTTGAGTGGGAATCGGCTAAATGGAAGTATTCCGGAGGAAATTTGTGAAGCCCCGGCCTTGAAGGTGCTGAAACTGGAGAAAAACTCTCTTGCAGGATCAATTCCTTTTTCAATTGGAAAGTGTTCTTCTCTAGTGACTTTAATCTTATCGGAGAACAAATTATCTGGCCAGATTCCTGCATTGATGGCTAACCTTACTGATCTTCAAAGTGTGGACTTGTCTTTCAACCTCCTCAATGGAACTCTCCCTAAGCAGCTCTCTAATCTTCCCAACCTACTCTTGTTCAATATTTCGCACAACGACATCCATGGTGAACTGCCTGCCGGAGGATTTTTCAACACCATATCCCCTTCCTCTGTCTCCGGCAATCCATCTCTCTGTGGCTCTGTTGTTAAGAAATCTTGCCCTGCAGTTCTTCCCAAACCCATTGTTCTTAACCCCAACTCATCCTCCGACTCCACTGCAACTACTCTCCCTTCGGGTCTTGCTAACAAGAAAATCATCCTCAGCATATCAACTCTCATCGCCATTGGAGCAGCTGCTTTGATTGTGATTGGCGTAATAGCAATCACGGTGCTTAATATCCGAGTTCGATCATCCATTTCTCGTTCTGCAGCAGCCCTCTCTTTTTCTGCCGGAGATGACTTTAGTCACTCTCCCACCACTGACGCCAATTCTGGCAAGCTTGTCATGTTTTCTGGCGACTCGGACTTCAGTGCTGGGGCTCATGCATTGCTCAATAAAGATTGTGAGCTTGGGAGGGGTGGATTTGGAACAGTCTACAAGACCCTTCTTCGGAATGGGCATTCAGTTGCGATCAAGAAGCTCACTGTCTCCAGTCTCGTCAAGTCCCAAGACGACTTCAAAAGGGAAGTTAAGAAGTTGGGGAAAGTCCAGCACCGGAATATCATCACCCTTCATGGTTATTACTGGACTCCGTCACTGCAGCTCCTCATCTCTGAATTTGTTGCAGGAGGAAGTTTGTATTCGCACCTCCATGAAGCAACGGATGGAAACTTCCTCTCGTGGAATGAGAGGTTCAACATTATACTCGGGACAGCCAAAAGCATGGCGTACTTACACCAAGTGAACATTATCCACTACAATATCAAGGCAAGCAACATCTTGATCGACAGCTCCGGCGAACCAAAGATTGGAGATTTCGGCCTGGCAAAGCTGTTGCCGATGCTAGACCGGTACCTTTTGAGCAGCAAGATTCAGAGTGCACTTGGCTATATGGCCCCTGAATTTGCATGTAAAACGGTGAAAATAACAGAAAAATGTGATGTTTATGGGTTTGGGGTTTTGGTCTTGGAAGTGGTCACCGGAAAAAGACCTGTCGAGTACATGGAAGATGATGTGGTTGTTCTTTGTGACATGGTGAGAGGAGCATTGGAGGAAGGCAAGGTGGAAGAATGCGTCGACCGGAGGCTCTTGGGGAACTTTCCGGCCGAGGAAGCAATTCCAATCATGAAATTAGGCTTGATCTGTACTTCTCAAGTGCCGTCAAACCGGCCAGACATGGGGGAGGTAGTAAATATATTGGAGCTGGTACGATGCCCGTCAGAAGGCATTGAGGAATCAGGATGA 2931 46.43 MRLLLLKMRNLGEVLILLLLAPVFARGLNPPLNDDVLGLIVFKADIQDLKGNLASWNEDDDCPCNWVGVQCNPRSKRVTELNLAGFSLSGRLGRGLVQLQFLRKLSLSDNNLTGNVGPNIARINNLRVIDLGNNGFSGSLPNDFFNQCGSLRVVSLAGNKFSGKIPDSLTSCAVLAALNLSSNQFSGLLPSGIWSLSGLRSLDLSDNLLEGNIQKEVEGLNNLRAINLSKNRFSGQIPDGIGNCLLLRSIDLSENSFSGNLPDTLRQLSLCHNLKLPKNSFVGKVPDWIQEMKSLETVDLSANTFSGQVPDSVGNLPSLKVLNFSSNGFTGSLPESLINCQSLMVLDFSHNSISGDFSTWISKMGSQNLLLSESKQSRSPTSSISTVSEKSLPNLQILDLSHNAFSGVMAPDIEIFDNLQLLNLAGNSLAGNIPKSIGGLTALDTLDLSGNRLNGSIPEEICEAPALKVLKLEKNSLAGSIPFSIGKCSSLVTLILSENKLSGQIPALMANLTDLQSVDLSFNLLNGTLPKQLSNLPNLLLFNISHNDIHGELPAGGFFNTISPSSVSGNPSLCGSVVKKSCPAVLPKPIVLNPNSSSDSTATTLPSGLANKKIILSISTLIAIGAAALIVIGVIAITVLNIRVRSSISRSAAALSFSAGDDFSHSPTTDANSGKLVMFSGDSDFSAGAHALLNKDCELGRGGFGTVYKTLLRNGHSVAIKKLTVSSLVKSQDDFKREVKKLGKVQHRNIITLHGYYWTPSLQLLISEFVAGGSLYSHLHEATDGNFLSWNERFNIILGTAKSMAYLHQVNIIHYNIKASNILIDSSGEPKIGDFGLAKLLPMLDRYLLSSKIQSALGYMAPEFACKTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEEGKVEECVDRRLLGNFPAEEAIPIMKLGLICTSQVPSNRPDMGEVVNILELVRCPSEGIEESG 976
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 23305272 23308473 - Bpe016480.1 Bpe04g01773 103582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g01773 976 Pfam Leucine rich repeat 418 477 IPR001611 GO:0005515
Bpe04g01773 976 Pfam Leucine rich repeat 125 185 IPR001611 GO:0005515
Bpe04g01773 976 SMART LRR_typ_2 123 147 IPR003591 -
Bpe04g01773 976 SMART LRR_typ_2 316 340 IPR003591 -
Bpe04g01773 976 SMART LRR_typ_2 392 418 IPR003591 -
Bpe04g01773 976 SMART LRR_typ_2 220 244 IPR003591 -
Bpe04g01773 976 SMART LRR_typ_2 536 560 IPR003591 -
Bpe04g01773 976 SMART LRR_typ_2 512 535 IPR003591 -
Bpe04g01773 976 SMART LRR_typ_2 440 464 IPR003591 -
Bpe04g01773 976 SMART LRR_typ_2 196 219 IPR003591 -
Bpe04g01773 976 Gene3D Phosphorylase Kinase; domain 1 684 769 - -
Bpe04g01773 976 PRINTS Leucine-rich repeat signature 395 408 - -
Bpe04g01773 976 PRINTS Leucine-rich repeat signature 440 453 - -
Bpe04g01773 976 Pfam Protein tyrosine and serine/threonine kinase 695 960 IPR001245 GO:0004672|GO:0006468
Bpe04g01773 976 Gene3D Ribonuclease Inhibitor 313 586 IPR032675 -
Bpe04g01773 976 SMART LRR_sd22_2 196 222 - -
Bpe04g01773 976 SMART LRR_sd22_2 512 538 - -
Bpe04g01773 976 SMART LRR_sd22_2 392 421 - -
Bpe04g01773 976 SMART LRR_sd22_2 440 463 - -
Bpe04g01773 976 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC2 11 972 - -
Bpe04g01773 976 CDD STKc_IRAK 699 963 - -
Bpe04g01773 976 SUPERFAMILY Protein kinase-like (PK-like) 697 961 IPR011009 -
Bpe04g01773 976 SUPERFAMILY L domain-like 48 365 - -
Bpe04g01773 976 Gene3D Ribonuclease Inhibitor 33 312 IPR032675 -
Bpe04g01773 976 Gene3D Transferase(Phosphotransferase) domain 1 770 971 - -
Bpe04g01773 976 SUPERFAMILY RNI-like 273 573 - -
Bpe04g01773 976 Pfam Leucine rich repeat N-terminal domain 33 72 IPR013210 -
Bpe04g01773 976 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 11 972 - -
Bpe04g01773 976 ProSiteProfiles Protein kinase domain profile. 693 965 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe04g01773 976 ProSitePatterns Protein kinases ATP-binding region signature. 699 722 IPR017441 GO:0005524
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00977 Bpe-Chr3:29296425 Bpe04g01773 Bpe-Chr4:23305272 0 dispersed
Bpe04g00994 Bpe-Chr4:6938037 Bpe04g01773 Bpe-Chr4:23305272 1.47E-22 dispersed
Bpe04g01773 Bpe-Chr4:23305272 Bpe05g01131 Bpe-Chr5:23612290 1.89E-136 dispersed
Bpe15g00947 Bpe-Chr15:19194777 Bpe04g01773 Bpe-Chr4:23305272 3.67E-63 dispersed
Bpe04g01773 Bpe-Chr4:23305272 Bpe07g00139 Bpe-Chr7:985173 2.46E-19 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63337 PF07714 PK_Tyr_Ser-Thr 1.40E-43 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g01773 - - mcha:111006338 1375.15