Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g01781 ATGGATCCCGACGCCTTCACGGCCAGTTTATTCAAGTGGGACCCTCGAGCTGCCGTTGGACCATCCAATCGCTTACTAGACCATGTGGCTACTCCACCCGCCGGCGCTGCTGTTGTTACCACGACGTTCTCAGTCCGACCGAGGGATCTGGGTGGGCTGGAAAACTTGTTTCAGGCTTACGGTATTAGATACTACACCGCATCAAAGATAGCAGAGCTTGGATTCACCGTGAGTACTCTGTTGAACATGAAAGACGTAGAGCTGGACGATATGATGAACAGTCTCTCGCAGATATTCCGGTGGGACCTTTTGGTCGGAGAGAGGTACGGCATTAAAGCGGCTGTTAGAGCCGAGAGAAGACGACTGGAAGATGAAATGGATTCCCGGCGCCGCCACTTACTCTCCGCTGATGCTGCTAATAACGATTTTGATGCTCTCTCTCAGGAAGGTCGATTATCGGAGGAGCCAGTGCATCAGGAAAAGGAGTTGATCCGAAGCGGCGGAGGACCAAGGGATGTGATTGCAGCTTCAGAGAAGAAGAACCGGCGACGTCGGAAGGGGCAAAAACTGCTAGTTGACTTGGATAACGACGGAAACGATGTAGGAGAAGAAGACGACGACGATGTGAATGGTGGAAATGAAAGACAACGAGAACACCCGTTCATCGTGACAGAACCAGGAGAAGTTGCGAGAGGGAAGAAGAATGGCCTCGATTACCTCTTCCACCTCTACGAGCAGTGTCATGAATTTCTGATCCAGGTGCAGAATATAGCCAAGGACCGCGGCGAGAAATGCCCCACCAAGGTGACGAATCAGGTGTTTAGATACGCGAAGAAGGCCGGAGCGAGCTACATCAACAAGCCCAAAATGCGGCACTACGTCCACTGCTTCGCGCTGCATTGCCTGGACGAGGAGGCATCGAATGCGCTGAGGACGGCGTTCAAAGAGAGGGGGGAGAACGTTGGAGCTTGGCGAGAAGCCTGCTACAAACCTCTGGTGGGCGTCGCCGCCCGGCGAGGGTGGGACATAGATGCGATATTCAACTCCCATCCTCGTTTGGCTATTTGGTACGTCCCCACCAAACTCCGGCAGCTTTGTCACTCTGACCGCAATAGCGTTGCAGCTTCGAGCTGTGTCTCCAATGGCCGCGATCTCATTCCCTTCTGA 1167 53.47 MDPDAFTASLFKWDPRAAVGPSNRLLDHVATPPAGAAVVTTTFSVRPRDLGGLENLFQAYGIRYYTASKIAELGFTVSTLLNMKDVELDDMMNSLSQIFRWDLLVGERYGIKAAVRAERRRLEDEMDSRRRHLLSADAANNDFDALSQEGRLSEEPVHQEKELIRSGGGPRDVIAASEKKNRRRRKGQKLLVDLDNDGNDVGEEDDDDVNGGNERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCHEFLIQVQNIAKDRGEKCPTKVTNQVFRYAKKAGASYINKPKMRHYVHCFALHCLDEEASNALRTAFKERGENVGAWREACYKPLVGVAARRGWDIDAIFNSHPRLAIWYVPTKLRQLCHSDRNSVAASSCVSNGRDLIPF 388
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 23346746 23348084 - Bpe016488.1 Bpe04g01781 103590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g01781 388 MobiDBLite consensus disorder prediction 149 216 - -
Bpe04g01781 388 Pfam DNA Binding Domain (C-terminal) Leafy/Floricaula 210 374 IPR035209 GO:0003677
Bpe04g01781 388 Pfam Floricaula / Leafy protein SAM domain 49 126 IPR035079 -
Bpe04g01781 388 Gene3D Protein LEAFY 211 380 IPR038276 -
Bpe04g01781 388 PANTHER PROTEIN LEAFY 1 384 IPR002910 GO:0003677|GO:0006355
Bpe04g01781 388 MobiDBLite consensus disorder prediction 149 167 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe15g01214 Bpe-Chr15:20790034 Bpe04g01781 Bpe-Chr4:23346746 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21379 PF17538 C_LFY_FLO 2.70E-106 CL0123 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g01781 - - pvy:116135761 578.556