Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g01792 ATGTTGCAGAGGGAGGAGATAGCCGTTGGAGGGGTAATTAAAGCCAAGTCCTTTCCACCACCCTCGAGATTGAGTGCAATAATTTATGGTGCGTTTTCGAGAGCAGGGAATTGGCTCGACTATGGATTAAATAATACAAGAGAACTAGCCGTTGGCCTTTGTTTGTCCAACGCTGTTCTTCTTCTCAGAGATTCCTCTCTCTCTCTCTCTCTAGTTCACGTGTTCATCCAACAGACTTTACCACTTTCGTTTTTCTCATTGTTACAAGACCTTCTACCTTTTAGTTTGATATTTTCTCACTCGAGCCACTGCCCTTTTTCTGTCGCAGCGTTAAGTACAAGAGAAAATTCAATAACCAGCAGAGAACCCACTATTTACAGTTTGAATTCATTCGTCTTCTTCTTCTTCTTCTTCTTCATGGCTATGAATCCAGTGGCCAAGCTTCGATTAGTCCAGAAAAAAACTGCATTTTGGCCGACTTCTAATATTTCTGAGAACGCGAGTGAGAAATGGAAGACTCAACCCAAACGCTGCTCCTTCTGGTTTCTTCTGTTGCTTCTTTATCTCATCCGACCAGTTTTAAGCCGGAATTGGGACGGCGTAGTGGTAACAGAAGCTGATTTCCAGTCACTTCAAGCATTCAAGCATGAATTAGTGGACCCAAAAGGTTTTCTCAGAAGCTGGAACGATAGCGGATTCGGCGCTTGCTCCGGCGGCTGGGTTGGAATAAAGTGCGCGCAGGGGGAAGTTATAGTGATCCAACTCCCATGGAAAGGGCTGGGTGGTCGAATCTCAGAAAAAATCGGCCAACTCGAAGCACTTCGGAAGCTTAGCCTCCACGACAATCTCATCGGCGGTCCAATTCCTTACTCTCTGGGATTCCTTCCGAATCTGAGAGGAGTTCAGCTGTTTAACAACCGACTTTCCGGTTCAGTTCCTCCTTCGTTAGGCTCCTGCCCTTTGCTTCAGACTCTTGATCTGAGCAACAATTCTTTATCTGGGTCTATCCCCTCAAGTCTCGCCAACTCTACCAAGCTTTACTGGCTTAATCTCAGTTTCAATTCGTTTTCGGGTCCTATCCCAAGTTCTCTGACAAACTCCGTCTCCCTCACCTTCCTTTCTCTCGACCACAACAATCTTTCGGGGCCCATTCCTGAGTCTTGGGGACCGACCCAGAGTAAAAATAGGCTCTTTCGTCTTCAATCCATTATCCTGGATAATAACCTTCTCTCGGGAAGCATACCTGCCTCTCTCGGGAATCTCAGTAAGCTCCAAGTGATTTCTGTCAGCAATAATGAGTTGGAAGGAAGCTGGCCGATGGAACTGGAGCAGCTTTCTAGTCTTAGAACTCTTGATGCTTCGAATAATCGATTCAATGGAAGATTACCCGACAGTCTTTTCAATAATCTCTCTGTTCTTAATTTGAGTGGTAATCTGTTTAATGGCCGCATTCCTGCGACTCTAGGGAAGATTTCGTCGCTTACTGAGCTTGATTTGTCTCGAAATAAATTGAGTGGACAAATCCCAACGTCTCTCGCTGATTTACCGGCGCTTAATTTCTTGAATGTTTCTTACAACAACCTTTCTGGGTCTGTTCCGGCTGCTCTCTCGAAGAAATTCAACTCGAGTTCATTTATCGGGAATGTCCAGTTATGTGGGTTCAGTGGTTCCGCTCCATGCTCTTCTTCCCTAGCTCCTTCTCAGATTTTACCGACTCCATCTCCAGAGAAATCCTCAGGCCATCACCGGAAATTAAGCACCAAAGATGTCATACTCATTGCAGCAGGATCTCTCCTCATCGTCCTGCTTTTACTTTGTTGTATATTGTGTTGCTGCTTAATTAAGAAAAGGGCTGCATCAAAAGGGAAGGACGGTGATCCAGCCGAGAGAGGAGGGGCTGCAAGAGCCGAAAAGGGCTTACCTCCCACTGCCGGAGAAGTTGAAGCCGGAGGGGACGTGGGTGGAAAGCTCGTCCATTTCGACGGGCCGATGATCTTCACCGCAGATGATCTTTTGTGTGCAACAGCAGAGATTATGGGAAAGAGCACTTACGGGACAGTCTATAAGGCCACGCTCGAGGATGGAAATCAAGTAGCAGTGAAGAGACTGAGGGAGAAGATAACTAAAGGCAGGAGGGAATTCGAAACGGAAGTCGATCTGCTCGGAAAAATCCGGCACCAGAATCTTCTGGCTTTAATGGCTTATTACTTGGGACCAAAGGGAGAAAAGCTTCTTGTTTTCGACTTCATGCCGAAGGGAAGTCTCGCAACCTTCCTCCATGCTCGAGGGACAGACTCGCCGATTGACTGGCCGACGAGGATGAAAATAATGCAGGGGATGACTCGAGGATTGTTTTACCTCCACACCCATGAGAGCATTATACACGGCAATCTTACATCGAGTAATATTCTCCTCGACGAGCAGACCAACGCGAAGATCGCAGATTTTGGACTGTCAAGGTTAATGACAGCAGCCGCGAATTCGAACGTGATTGCAACGGCCGGAGCATTAGGCTACAGAGCTCCAGAGCTATCTAAGCTGAAGAAAGCCAACACAAAAACAGACGTATACAGCCTAGGTGTTATAATGTTAGAACTCTTAACCGGAAAGTCCCCCGGAGAGGCGATGAACGGAGTGGATTTGCCGCAGTGGGTGGCATCGATTGTTAAAGAAGAGTGGACGAATGAGGTGTTCGATCTAGAGTTGATGCGGGACGCATCGGCCATTGGCGATGAGTTGCTTAATACATTGAAACTAGCTTTGCATTGTGTTGATCCTTCTCCTTCTGCAAGACCAGAAGTCCAGCAGATTCTGCATCAATTAGAAGAGATCAGACCAGAGACCACTCCTAGTTCGGGAGATGACAGGCCCAGCGCCATCTCGACCGGCCACTAA 2895 47.05 MLQREEIAVGGVIKAKSFPPPSRLSAIIYGAFSRAGNWLDYGLNNTRELAVGLCLSNAVLLLRDSSLSLSLVHVFIQQTLPLSFFSLLQDLLPFSLIFSHSSHCPFSVAALSTRENSITSREPTIYSLNSFVFFFFFFFMAMNPVAKLRLVQKKTAFWPTSNISENASEKWKTQPKRCSFWFLLLLLYLIRPVLSRNWDGVVVTEADFQSLQAFKHELVDPKGFLRSWNDSGFGACSGGWVGIKCAQGEVIVIQLPWKGLGGRISEKIGQLEALRKLSLHDNLIGGPIPYSLGFLPNLRGVQLFNNRLSGSVPPSLGSCPLLQTLDLSNNSLSGSIPSSLANSTKLYWLNLSFNSFSGPIPSSLTNSVSLTFLSLDHNNLSGPIPESWGPTQSKNRLFRLQSIILDNNLLSGSIPASLGNLSKLQVISVSNNELEGSWPMELEQLSSLRTLDASNNRFNGRLPDSLFNNLSVLNLSGNLFNGRIPATLGKISSLTELDLSRNKLSGQIPTSLADLPALNFLNVSYNNLSGSVPAALSKKFNSSSFIGNVQLCGFSGSAPCSSSLAPSQILPTPSPEKSSGHHRKLSTKDVILIAAGSLLIVLLLLCCILCCCLIKKRAASKGKDGDPAERGGAARAEKGLPPTAGEVEAGGDVGGKLVHFDGPMIFTADDLLCATAEIMGKSTYGTVYKATLEDGNQVAVKRLREKITKGRREFETEVDLLGKIRHQNLLALMAYYLGPKGEKLLVFDFMPKGSLATFLHARGTDSPIDWPTRMKIMQGMTRGLFYLHTHESIIHGNLTSSNILLDEQTNAKIADFGLSRLMTAAANSNVIATAGALGYRAPELSKLKKANTKTDVYSLGVIMLELLTGKSPGEAMNGVDLPQWVASIVKEEWTNEVFDLELMRDASAIGDELLNTLKLALHCVDPSPSARPEVQQILHQLEEIRPETTPSSGDDRPSAISTGH 964
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 23413628 23416620 + Bpe016499.1 Bpe04g01792 103601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g01792 964 Pfam Leucine Rich Repeat 322 341 IPR001611 GO:0005515
Bpe04g01792 964 SMART LRR_typ_2 445 469 IPR003591 -
Bpe04g01792 964 SMART LRR_typ_2 515 538 IPR003591 -
Bpe04g01792 964 SMART LRR_typ_2 397 421 IPR003591 -
Bpe04g01792 964 SMART LRR_typ_2 491 514 IPR003591 -
Bpe04g01792 964 SMART LRR_typ_2 295 319 IPR003591 -
Bpe04g01792 964 MobiDBLite consensus disorder prediction 621 648 - -
Bpe04g01792 964 Gene3D Phosphorylase Kinase; domain 1 679 750 - -
Bpe04g01792 964 Pfam Protein tyrosine and serine/threonine kinase 676 941 IPR001245 GO:0004672|GO:0006468
Bpe04g01792 964 CDD STKc_IRAK 679 944 - -
Bpe04g01792 964 MobiDBLite consensus disorder prediction 945 964 - -
Bpe04g01792 964 Pfam Leucine rich repeat N-terminal domain 206 245 IPR013210 -
Bpe04g01792 964 MobiDBLite consensus disorder prediction 941 964 - -
Bpe04g01792 964 Pfam Leucine rich repeat 469 528 IPR001611 GO:0005515
Bpe04g01792 964 Pfam Leucine rich repeat 399 458 IPR001611 GO:0005515
Bpe04g01792 964 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 160 468 - -
Bpe04g01792 964 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 469 950 - -
Bpe04g01792 964 PRINTS Leucine-rich repeat signature 322 335 - -
Bpe04g01792 964 PRINTS Leucine-rich repeat signature 491 504 - -
Bpe04g01792 964 SUPERFAMILY Protein kinase-like (PK-like) 677 946 IPR011009 -
Bpe04g01792 964 Gene3D Ribonuclease Inhibitor 203 393 IPR032675 -
Bpe04g01792 964 Gene3D Ribonuclease Inhibitor 394 563 IPR032675 -
Bpe04g01792 964 ProSiteProfiles Protein kinase domain profile. 673 942 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe04g01792 964 SUPERFAMILY L domain-like 244 552 - -
Bpe04g01792 964 Gene3D Transferase(Phosphotransferase) domain 1 751 957 - -
Bpe04g01792 964 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 160 468 - -
Bpe04g01792 964 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 469 950 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01290 Bpe-Chr4:19168854 Bpe04g01792 Bpe-Chr4:23413628 1.60E-11 dispersed
Bpe04g01792 Bpe-Chr4:23413628 Bpe13g01075 Bpe-Chr13:16329234 2.27E-20 dispersed
Bpe07g00995 Bpe-Chr7:15636696 Bpe04g01792 Bpe-Chr4:23413628 2.19E-42 transposed
Bpe08g00263 Bpe-Chr8:1526456 Bpe04g01792 Bpe-Chr4:23413628 1.48E-41 transposed
Bpe10g00328 Bpe-Chr10:10789772 Bpe04g01792 Bpe-Chr4:23413628 1.41E-13 transposed
Bpe11g00421 Bpe-Chr11:3212894 Bpe04g01792 Bpe-Chr4:23413628 6.79E-33 transposed
Bpe12g00365 Bpe-Chr12:8935676 Bpe04g01792 Bpe-Chr4:23413628 4.84E-14 transposed
Bpe03g00985 Bpe-Chr3:29399732 Bpe04g01792 Bpe-Chr4:23413628 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63338 PF07714 PK_Tyr_Ser-Thr 3.70E-42 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g01792 - - csv:101214895 1154.43