Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g01804 ATGTCTTTTGGATTTGCAGCTTTGATTTCACCTTCCATGATTGGTTCTTCAACTCTGTGCAAGGCTTCTCCGTCATCTGATTCTCCGAGAGTTTTGAGTCTAAACAACGTCTACGAATCATCACCATCGCCGTCGTCTTCGACCGTCTCACCGTTATCAATGGGCATCCGGCGACAGAAGCAAATGAGCGACGCCCCCAGTAATAGTATTCTTTCGAAGAAGAGGCCTGCTAGATTAGCAATACCGATTGTTTCTGTTGATTTAGGAGGGGATAACGATGCTATTGATGAGCGAGTGGATCTGGTTGAAGTGGAAGAGGAAGGTTATTCGGTTTATTGCAAGAAGGGAAGGAGAGGACTGGGGGGGACTGCTATGGAGGATCGATACACCGCCATAGTTAATCGGCGTAAAGATTGTATACAGGCTTCCTTCTTCGGTGTTTTTGACGGTCATGGAGGATCAAAAGCAGCAGAGTTCGTAGCAAAAGAAATGGGCAAAAACTTGCTTGATCGGGCAGCTAGGAGAAGCGAAAAGGATATTGAGCAAACCATCAAAGAATGCTACTTAAGTACAGATAAACAGTTTTCAGATGTTGGTGGCGGCGGCGGCACTTGCTGCGTAACTGCATTGATACGAGACGGCAATCTCGCAGTCTCCAATGCCGGAGACTGTCGCGCCGTTTTGAGCAGAAAAGGAACGGCAGAGGCCCTCAGTTCCGATCACCGTCCATCGAGGGACGACGAAAGATTAAGAATTCAAAACCTGGGTGGTTACGTAGACTGCCGCAACGGAGTTTGGAGAGTTCAAGGATCACTCGGAGTGTCGAGAGGAATAGGCGACATTCACCTGAAGCAGTGGGTCATATCGGAGCCGGAGACAGTAATCACCGGGATCAGCCGTGATTGTGAGTTCTTAATCCTCGCTTCCGACGGTTTATGGGACAAGGTCAGCAACGAGGAGGCAGTAGACCTGGTTCGGCCTTTATGCGTAGGTGTTGAACCTCCAAATTTACTCTTGGCCTGTAAAAAGATGGCTGAATTATCAATGGCGAGAGGCTCGACTGACGACATAAGCGTGATGATCGTCAAATTGAGTAGCTTTGTTTAG 1107 48.24 MSFGFAALISPSMIGSSTLCKASPSSDSPRVLSLNNVYESSPSPSSSTVSPLSMGIRRQKQMSDAPSNSILSKKRPARLAIPIVSVDLGGDNDAIDERVDLVEVEEEGYSVYCKKGRRGLGGTAMEDRYTAIVNRRKDCIQASFFGVFDGHGGSKAAEFVAKEMGKNLLDRAARRSEKDIEQTIKECYLSTDKQFSDVGGGGGTCCVTALIRDGNLAVSNAGDCRAVLSRKGTAEALSSDHRPSRDDERLRIQNLGGYVDCRNGVWRVQGSLGVSRGIGDIHLKQWVISEPETVITGISRDCEFLILASDGLWDKVSNEEAVDLVRPLCVGVEPPNLLLACKKMAELSMARGSTDDISVMIVKLSSFV 368
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 23486980 23488373 - Bpe016510.1 Bpe04g01804 103613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g01804 368 SUPERFAMILY PP2C-like 109 365 IPR036457 -
Bpe04g01804 368 ProSitePatterns PPM-type phosphatase domain signature. 144 152 IPR000222 GO:0043169
Bpe04g01804 368 SMART PP2C_4 101 362 IPR001932 -
Bpe04g01804 368 Pfam Protein phosphatase 2C 125 357 IPR001932 -
Bpe04g01804 368 Gene3D - 100 366 IPR036457 -
Bpe04g01804 368 ProSiteProfiles PPM-type phosphatase domain profile. 108 364 IPR001932 -
Bpe04g01804 368 CDD PP2Cc 108 364 IPR001932 -
Bpe04g01804 368 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN-RELATED 22 367 - -
Bpe04g01804 368 PANTHER PROTEIN PHOSPHATASE 2C 22 367 IPR015655 GO:0004722|GO:0006470
Bpe04g01804 368 MobiDBLite consensus disorder prediction 33 70 - -
Bpe04g01804 368 SMART PP2C_SIG_2 127 364 IPR001932 -
Bpe04g01804 368 MobiDBLite consensus disorder prediction 33 71 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01804 Bpe-Chr4:23486980 Bpe02g00524 Bpe-Chr2:3410677 1.90E-52 dispersed
Bpe04g01804 Bpe-Chr4:23486980 Bpe14g00296 Bpe-Chr14:2943164 7.28E-86 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g01804 K17506 - csin:114320622 386.726