Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe04g01804 | ATGTCTTTTGGATTTGCAGCTTTGATTTCACCTTCCATGATTGGTTCTTCAACTCTGTGCAAGGCTTCTCCGTCATCTGATTCTCCGAGAGTTTTGAGTCTAAACAACGTCTACGAATCATCACCATCGCCGTCGTCTTCGACCGTCTCACCGTTATCAATGGGCATCCGGCGACAGAAGCAAATGAGCGACGCCCCCAGTAATAGTATTCTTTCGAAGAAGAGGCCTGCTAGATTAGCAATACCGATTGTTTCTGTTGATTTAGGAGGGGATAACGATGCTATTGATGAGCGAGTGGATCTGGTTGAAGTGGAAGAGGAAGGTTATTCGGTTTATTGCAAGAAGGGAAGGAGAGGACTGGGGGGGACTGCTATGGAGGATCGATACACCGCCATAGTTAATCGGCGTAAAGATTGTATACAGGCTTCCTTCTTCGGTGTTTTTGACGGTCATGGAGGATCAAAAGCAGCAGAGTTCGTAGCAAAAGAAATGGGCAAAAACTTGCTTGATCGGGCAGCTAGGAGAAGCGAAAAGGATATTGAGCAAACCATCAAAGAATGCTACTTAAGTACAGATAAACAGTTTTCAGATGTTGGTGGCGGCGGCGGCACTTGCTGCGTAACTGCATTGATACGAGACGGCAATCTCGCAGTCTCCAATGCCGGAGACTGTCGCGCCGTTTTGAGCAGAAAAGGAACGGCAGAGGCCCTCAGTTCCGATCACCGTCCATCGAGGGACGACGAAAGATTAAGAATTCAAAACCTGGGTGGTTACGTAGACTGCCGCAACGGAGTTTGGAGAGTTCAAGGATCACTCGGAGTGTCGAGAGGAATAGGCGACATTCACCTGAAGCAGTGGGTCATATCGGAGCCGGAGACAGTAATCACCGGGATCAGCCGTGATTGTGAGTTCTTAATCCTCGCTTCCGACGGTTTATGGGACAAGGTCAGCAACGAGGAGGCAGTAGACCTGGTTCGGCCTTTATGCGTAGGTGTTGAACCTCCAAATTTACTCTTGGCCTGTAAAAAGATGGCTGAATTATCAATGGCGAGAGGCTCGACTGACGACATAAGCGTGATGATCGTCAAATTGAGTAGCTTTGTTTAG | 1107 | 48.24 | MSFGFAALISPSMIGSSTLCKASPSSDSPRVLSLNNVYESSPSPSSSTVSPLSMGIRRQKQMSDAPSNSILSKKRPARLAIPIVSVDLGGDNDAIDERVDLVEVEEEGYSVYCKKGRRGLGGTAMEDRYTAIVNRRKDCIQASFFGVFDGHGGSKAAEFVAKEMGKNLLDRAARRSEKDIEQTIKECYLSTDKQFSDVGGGGGTCCVTALIRDGNLAVSNAGDCRAVLSRKGTAEALSSDHRPSRDDERLRIQNLGGYVDCRNGVWRVQGSLGVSRGIGDIHLKQWVISEPETVITGISRDCEFLILASDGLWDKVSNEEAVDLVRPLCVGVEPPNLLLACKKMAELSMARGSTDDISVMIVKLSSFV | 368 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 23486980 | 23488373 | - | Bpe016510.1 | Bpe04g01804 | 103613 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe04g01804 | 368 | SUPERFAMILY | PP2C-like | 109 | 365 | IPR036457 | - | |
Bpe04g01804 | 368 | ProSitePatterns | PPM-type phosphatase domain signature. | 144 | 152 | IPR000222 | GO:0043169 | |
Bpe04g01804 | 368 | SMART | PP2C_4 | 101 | 362 | IPR001932 | - | |
Bpe04g01804 | 368 | Pfam | Protein phosphatase 2C | 125 | 357 | IPR001932 | - | |
Bpe04g01804 | 368 | Gene3D | - | 100 | 366 | IPR036457 | - | |
Bpe04g01804 | 368 | ProSiteProfiles | PPM-type phosphatase domain profile. | 108 | 364 | IPR001932 | - | |
Bpe04g01804 | 368 | CDD | PP2Cc | 108 | 364 | IPR001932 | - | |
Bpe04g01804 | 368 | PANTHER | PROTEIN PHOSPHATASE 2C FAMILY PROTEIN-RELATED | 22 | 367 | - | - | |
Bpe04g01804 | 368 | PANTHER | PROTEIN PHOSPHATASE 2C | 22 | 367 | IPR015655 | GO:0004722|GO:0006470 | |
Bpe04g01804 | 368 | MobiDBLite | consensus disorder prediction | 33 | 70 | - | - | |
Bpe04g01804 | 368 | SMART | PP2C_SIG_2 | 127 | 364 | IPR001932 | - | |
Bpe04g01804 | 368 | MobiDBLite | consensus disorder prediction | 33 | 71 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe04g01804 | Bpe-Chr4:23486980 | Bpe02g00524 | Bpe-Chr2:3410677 | 1.90E-52 | dispersed | |
Bpe04g01804 | Bpe-Chr4:23486980 | Bpe14g00296 | Bpe-Chr14:2943164 | 7.28E-86 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe04g01804 | K17506 | - | csin:114320622 | 386.726 |