Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g01834 ATGAAGGCAATGGCAGCCATAATTCCAGTGTTCATTCTAAGTGGTGTTGTTCTAACGCTTGTTGACGCCAGAATTCCCGGAGTTTACAGTGGAGGAGATTGGCAGAGCGCCCACGCTACTTTTTACGGCGGAAGCGACGCCTCGGGAACAATGGGAGGGGCGTGTGGGTATGGAAACTTGTATAGCCAAGGCTACGGCAGTAGCACGGCGGCGCTAAGCACAGCGCTCTTCAACAACGGTATGAGCTGTGGCGCTTGCTTCGAGATCAAGTGCGCGAACGACCCGAAATGGTGCCACTCAGGCAGCCCGTCGATTTTGATCACTGCCACCAATTTCTGCCCTCCAAACTACGCTCTTCCCAGCGATAATGGCGGCTGGTGCAACCCACCTCGTCCACACTTCGACCTCGCCATGCCCATGTTCCTCAAAATAGCCGAATACCGCGCCGGAATCGTCCCCGTCTCTTACCGCCGAGTGTCATGCCGTAAGCAAGGAGGTATCAGGTTTACGATCAACGGGTTCAAATACTTCAATTTAGTTCTAATCACAAACGTCGCCGGGGCCGGAGATATCGTGAAAGCGAGCGTCAAGGGGTCCAGAACTGGGTGGATGGGCTTGAGTCGGAACTGGGGCCAAAACTGGCAGTCGAACGCTGTTTTGGTTGGTCAGTCACTTTCATTCAGAGTCACAGGCAGTGATCGCCGCACCTCCACTTCTTGGAACATAGTCCCCTCTCACTGGCAGTTCGGCCAAACTTTCACCGGAAAAAATTTCAGGGTCTGA 783 53.9 MKAMAAIIPVFILSGVVLTLVDARIPGVYSGGDWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGSSTAALSTALFNNGMSCGACFEIKCANDPKWCHSGSPSILITATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVSCRKQGGIRFTINGFKYFNLVLITNVAGAGDIVKASVKGSRTGWMGLSRNWGQNWQSNAVLVGQSLSFRVTGSDRRTSTSWNIVPSHWQFGQTFTGKNFRV 260
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 23631699 23632682 + Bpe016541.1 Bpe04g01834 103643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g01834 260 PANTHER EXPANSIN-A4 12 259 - -
Bpe04g01834 260 SUPERFAMILY PHL pollen allergen 163 255 IPR036749 -
Bpe04g01834 260 PRINTS Expansin/Lol pI family signature 149 165 IPR007118 GO:0005576
Bpe04g01834 260 PRINTS Expansin/Lol pI family signature 203 217 IPR007118 GO:0005576
Bpe04g01834 260 PRINTS Expansin/Lol pI family signature 33 48 IPR007118 GO:0005576
Bpe04g01834 260 PRINTS Expansin/Lol pI family signature 51 69 IPR007118 GO:0005576
Bpe04g01834 260 PRINTS Expansin/Lol pI family signature 241 255 IPR007118 GO:0005576
Bpe04g01834 260 PRINTS Expansin/Lol pI family signature 73 91 IPR007118 GO:0005576
Bpe04g01834 260 PRINTS Expansin signature 165 177 IPR002963 GO:0009664
Bpe04g01834 260 PRINTS Expansin signature 141 154 IPR002963 GO:0009664
Bpe04g01834 260 PRINTS Expansin signature 177 198 IPR002963 GO:0009664
Bpe04g01834 260 PRINTS Expansin signature 91 102 IPR002963 GO:0009664
Bpe04g01834 260 PRINTS Expansin signature 105 115 IPR002963 GO:0009664
Bpe04g01834 260 PRINTS Expansin signature 124 141 IPR002963 GO:0009664
Bpe04g01834 260 PRINTS Expansin signature 64 78 IPR002963 GO:0009664
Bpe04g01834 260 PRINTS Expansin signature 241 257 IPR002963 GO:0009664
Bpe04g01834 260 PRINTS Expansin signature 212 233 IPR002963 GO:0009664
Bpe04g01834 260 SUPERFAMILY Barwin-like endoglucanases 33 184 IPR036908 -
Bpe04g01834 260 SMART dpbb_1 69 156 IPR007112 -
Bpe04g01834 260 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 52 166 IPR007112 -
Bpe04g01834 260 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 176 255 IPR007117 -
Bpe04g01834 260 Pfam Expansin C-terminal domain 167 244 IPR007117 -
Bpe04g01834 260 Gene3D - 166 258 IPR036749 -
Bpe04g01834 260 Gene3D - 22 162 IPR036908 -
Bpe04g01834 260 PANTHER EXPANSIN-A15 12 259 IPR002963 GO:0009664
Bpe04g01834 260 Pfam Lytic transglycolase 69 156 IPR009009 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe04g01834 Bpe04g00743 CCT
Bpe04g01713 Bpe04g01834 CCT
Bpe04g01834 Bpe04g00743 ECH
Bpe04g01834 Bpe04g01713 ECH
Bpe04g00743 Bpe04g01834 ECH
Bpe04g01713 Bpe04g01834 ECH
Bpe03g01037 Bpe04g01834 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01834 Bpe-Chr4:23631699 Bpe10g00880 Bpe-Chr10:14579466 4.78E-124 dispersed
Bpe09g00714 Bpe-Chr9:15732808 Bpe04g01834 Bpe-Chr4:23631699 1.27E-90 dispersed
Bpe01g00128 Bpe-Chr1:758960 Bpe04g01834 Bpe-Chr4:23631699 8.13E-163 wgd
Bpe03g01037 Bpe-Chr3:29712682 Bpe04g01834 Bpe-Chr4:23631699 3.53E-164 wgd
Bpe04g01713 Bpe-Chr4:22972599 Bpe04g01834 Bpe-Chr4:23631699 8.55E-154 wgd
Bpe04g00743 Bpe-Chr4:4754375 Bpe04g01834 Bpe-Chr4:23631699 1.48E-162 wgd
Bpe04g01834 Bpe-Chr4:23631699 Bpe08g00100 Bpe-Chr8:548069 3.34E-162 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g01834 - - rcu:8261656 495.738