Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g01845 ATGTCAATGGAGGTGTTGGTGAGAGTGTTTAATGAAGGACGGCCATTTCTGGCTGTCATTTTTTTGCAGTTTGGATACGCAGGAATGTCCATTATTACTAAGTTTGCTCTAAACCAAGGAATGAGTCAGCATGTTTTGGTAGTTTATCGTCATGCTGTTGCCACCATTGTCTTTGCTCCTGTCGCGTTTTTCCTTGAAAGGAAAGTGAGGCCAAAGATGAACTTTTCCATCCTCTGGAAGATCATGTTGCTGGGTTTGTTAGAGCCGGTGATCGATCAGAATTTGTACTACACTGGCATGAAGTATACAACTGCAACCTTCGCAGCTGCCATGTCCAATGTTCTTCCTGCTTTTTCATTCTTACTGGCTTGGCTCTTAAGGCTGGAGAAGGTTGATATAAGGAGCCTTCACGGCCAGGCCAAGATAGTGGGAACTATGGTGACAGTAGGAGGAGCAATGTTCATGACTTTGATCAGAGGACCAAATTTGAATCTCCCATGGACAAACCAAAATCAGAATTACCATAACGACTCTTCCAGCTCTGCCAACAAGCAAGATCCTCTTAAAGGAGCACTAATGATCTCAGCTGGCTGTGTTAGCTGGTCTGGATTTATCATTCTCCAAGCAATTACGCTAAAATCTTATCCGGTTGAGCTTTCGTTAACAGCCTGGATCTGCTTTATGGGTATGGTGGAAGGAACTTTCCTGGCTATGGCGTTGGAATGGAAGGATTCTGCAGCTTGGTCGATCCATTTAGATGCTAAATTTTTTACTGCTCTTTATGGCGGGATAATGTGTTCTGGGATTGCTTATTATGTTCAAGGAGTCATAATGAAGAAAAGAGGGCCTGTTTTTGTGACTGCATTCAGCCCGCTTTCCATGGTTATTGTTGCAGTATTGGGGTCCTTCATTTTGTCTGAGATCATGTACTTAGGAAGGGTGATTGGTGCCACTGTGATTGTGTTTGGATTGTACCTGGTATTGTGGGGAAAGAGTAAGGATCAGATTCTATCAAATACAGCAACTGGAAAGACAGCACCAACAGATCAAGAAATGGGCGTTATAAATGAGACACAGTAA 1080 43.15 MSMEVLVRVFNEGRPFLAVIFLQFGYAGMSIITKFALNQGMSQHVLVVYRHAVATIVFAPVAFFLERKVRPKMNFSILWKIMLLGLLEPVIDQNLYYTGMKYTTATFAAAMSNVLPAFSFLLAWLLRLEKVDIRSLHGQAKIVGTMVTVGGAMFMTLIRGPNLNLPWTNQNQNYHNDSSSSANKQDPLKGALMISAGCVSWSGFIILQAITLKSYPVELSLTAWICFMGMVEGTFLAMALEWKDSAAWSIHLDAKFFTALYGGIMCSGIAYYVQGVIMKKRGPVFVTAFSPLSMVIVAVLGSFILSEIMYLGRVIGATVIVFGLYLVLWGKSKDQILSNTATGKTAPTDQEMGVINETQ 359
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 23693176 23695630 + Bpe016552.1 Bpe04g01845 103654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g01845 359 PANTHER WAT1-RELATED PROTEIN 11 340 - -
Bpe04g01845 359 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 147 - -
Bpe04g01845 359 SUPERFAMILY Multidrug resistance efflux transporter EmrE 252 333 - -
Bpe04g01845 359 Pfam EamA-like transporter family 17 140 IPR000620 GO:0016020|GO:0016021
Bpe04g01845 359 Pfam EamA-like transporter family 189 328 IPR000620 GO:0016020|GO:0016021
Bpe04g01845 359 PANTHER WAT1-RELATED PROTEIN 11 340 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00369 Bpe-Chr2:2430454 Bpe04g01845 Bpe-Chr4:23693176 1.18E-81 dispersed
Bpe04g00487 Bpe-Chr4:3063383 Bpe04g01845 Bpe-Chr4:23693176 8.64E-101 dispersed
Bpe04g00799 Bpe-Chr4:5242708 Bpe04g01845 Bpe-Chr4:23693176 2.00E-87 dispersed
Bpe04g01845 Bpe-Chr4:23693176 Bpe15g01102 Bpe-Chr15:20171892 7.47E-177 dispersed
Bpe02g00828 Bpe-Chr2:6074033 Bpe04g01845 Bpe-Chr4:23693176 1.80E-150 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g01845 - - qsu:112016472 493.812