Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g01846 ATGCCCAGAGATGCTGGGTGTTTAACTGAAGGAGAGATGGGCTATGATAGTTCTTCCAGAATGGATTCAAAACGTGGGCATCAGTGGTTCATGGATGGCAGTGCTCCAGAACTATTTAGCAGCAAGAAGCAGGCAACAGAAGCAGTAAACAATGTACCTGTACCAGGAGTTTCACATATGAATGTTTCTCTATGGGATAACTCTTCTGGTTTTCAGTCTGTTCCTGGGCAGTTAAGTGATCGCCTCTTTGGACCTGGACCTATGAGGACTGTCAATCTGGTTGACACAAACATTTCTACCCTTGGACATGGAGATATGCACATAGGAAGAAAGGATTTTGAGAATCAATATGGTAGTGATTCATCTGTAGGCTTATCCATGTCCCATACTACGGAAGATCCCTCGTCATGTCTGAATTTTGGTGGAATTAGAAAAGTTAAAGTAAATCAAGTAAGGGAATCTGAAAATGCCATGCCAACATCCATAAGACACCCATTCAGTGGAGAAGATAGTGGCACAATGACAATGGGTACCACCTACGGTAAAAATGATGAAAACATTATTTCCTTGGGCCAGACTTACACTAATAGAAATGAGAACATTTCGATGGGCTCTGCATTCAGTAAGGCGGATGATAATTTAATTTCAATGGGTCACACTTTCAATAAGGATGATGGTAATTTCATTTCTATGGGTCAAAACTATAGCAAGGGCGACAATAGGATTTTATCAATGAGTCAGCCCTTTGACAAAGTTGATAGAACCTATATATCAATGGGTCAGTCATATGAAAAAGCTAATGGAAATGTAGTTTCGCTGCAGAGGCCCTACGACAAGGGAAATGGAAATTTTATTTCAATGGGGCCAACTTATAGTAAAGCAAGTGAAAATTTCATTTCAATGGCTTCCTCCTATAACAAGGGCACAGGAGAGGCTTTATCAATAGGTACAGCCTATGATAAAGTTGACTCTGAATTTGTAACTTTGGGTACTAACTATGAAAGAGGAAACTCTGGGGTTCTATCAATGGGCCATAACTATAATAAGGGCGAGGGGACTACCATATCTTTTGGAGGGTTTGATGAGGAACCTGAGACTAATAATCCCTCTGGTGGGATCATCAGTAGCTATGATTTGTTGATGGGCACTCAGCATTCGGCTCATATCTCAGAAGTATCTATCCGGAAAGATTTTGTGGATTCAAGTGCTGATGGTAGTGTCAACAATTTTATGAAGGCAAACATGGACAACTCAGTAAAAGGTAAAGAGCCAAAGACAACTAAGAAGGTTTCCCCAAATAGTTTCCCTTCAAATGTCAAAAGTTTGTTATCAACTGGTATGCTAGACGGGGTTCCTGTGAAATATGTTTCTTGGTCGAGGGAAAAAAATCTGAAAGGTGTTATAAAAGGAACTGGCTATTTGTGCGACTGTGACAAGTGTATGCAATGTAAGGCTCTCAATGCTTATGAATTTGAGCGTCATGCTGGTTGCAAGACCAAACATCCCAATAATCACATTTATTTTGAGAATGGGAAGACCATATATGCAGTCGTTCAAGAGTTGAAGAACACTCCTCAGGAGATGCTATTTGATGCTATTCAGAACGTGACAGGCTCACCTATTAATCAGAAAAACTTCCGTATATGGAAAGCTTCATATCAAGCTGCCACCCGAGAACTTCAGCGTATTTATGGGACCGAGGAAGTAATCATGCCATCTTGA 1722 40.53 MPRDAGCLTEGEMGYDSSSRMDSKRGHQWFMDGSAPELFSSKKQATEAVNNVPVPGVSHMNVSLWDNSSGFQSVPGQLSDRLFGPGPMRTVNLVDTNISTLGHGDMHIGRKDFENQYGSDSSVGLSMSHTTEDPSSCLNFGGIRKVKVNQVRESENAMPTSIRHPFSGEDSGTMTMGTTYGKNDENIISLGQTYTNRNENISMGSAFSKADDNLISMGHTFNKDDGNFISMGQNYSKGDNRILSMSQPFDKVDRTYISMGQSYEKANGNVVSLQRPYDKGNGNFISMGPTYSKASENFISMASSYNKGTGEALSIGTAYDKVDSEFVTLGTNYERGNSGVLSMGHNYNKGEGTTISFGGFDEEPETNNPSGGIISSYDLLMGTQHSAHISEVSIRKDFVDSSADGSVNNFMKANMDNSVKGKEPKTTKKVSPNSFPSNVKSLLSTGMLDGVPVKYVSWSREKNLKGVIKGTGYLCDCDKCMQCKALNAYEFERHAGCKTKHPNNHIYFENGKTIYAVVQELKNTPQEMLFDAIQNVTGSPINQKNFRIWKASYQAATRELQRIYGTEEVIMPS 573
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 23696497 23698631 - Bpe016553.1 Bpe04g01846 103655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g01846 573 PANTHER N-LYSINE METHYLTRANSFERASE 1 573 - -
Bpe04g01846 573 Pfam Tify domain binding domain 466 521 IPR032308 -
Bpe04g01846 573 PANTHER AUTOIMMUNE REGULATOR 1 573 - -
Bpe04g01846 573 MobiDBLite consensus disorder prediction 1 21 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01846 Bpe-Chr4:23696497 Bpe04g01608 Bpe-Chr4:22254873 3.78E-40 dispersed
Bpe11g00777 Bpe-Chr11:5803817 Bpe04g01846 Bpe-Chr4:23696497 3.62E-19 wgd
Bpe15g01101 Bpe-Chr15:20165464 Bpe04g01846 Bpe-Chr4:23696497 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g01846 - - csv:101206313 819.305