Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g01861 ATGGTATCAGATACTTTGATGAAGATCGTATCGCCCTGCTGGAGACCTTCTGTTGAGGGTGAAAATTCTAGTAGAGGTGGAGACTCAAACCGCGGGAGGGTTGATGGGTTACTGTGGTATAAAGATTCTGGACGACACATGAATGGGGAATTCTCCATGGCAGTAATTCAAGCGAACAACTTACTGGAAGATCATAGCCAACTTGAATCAGGGCCAGTGAGCCTCTCTGAATCAGGTCCTCTGGGAACATTTGTTGGTATTTATGATGGCCACGGAGGTCCAGAAGCTGCACAGTTCGTAAATGATCATCTTTTTAACTATATCAGGACTATTCATGGTGCAGAACTAACATCAGAAAATCGAGGATTATCTGCTGAGGTTATTAACAAGGCATTCTTGGCAACTGAGGAAGAATTCTTATCTCTCGTGAAGAAGCAATGGGCCGACAAACCACAGATTGCTTCTGTAGGCTCATGTTGTTTGGTGGGTATAATATGCGGTGGGTTTCTATATATTGCGAATGCAGGAGATTCTCGAGTCGTGTTAGGAAGGCTCGAGAAAACTGTTAAAGAAGTTAAAGCCATTCAATTATCAACAGAGCACAATGCTAGCATGGAATCTGTGAGAGAGGAGTTACGCTCTACGCATCCCGATGATCCACAGATTGTGGTTTTGAAGCACAAGGTTTGGCGTGTGAAGGGTTTAATACAGGTTTCTAGATCTATTGGTGATGCCTATTTGAAGAAGGCGGAGTTCAATCGAGAGCCTTTATTGTCTAAGTTTAGATTGCCCCAGCCATTCGAGAAGCCGATTCTTAAAGCTGAGCCCACAATCTCTGTTGAGAAGCTTTATCCCGAAGATCAGTTTTTAGTCTTTGCATCAGATGGCTTGTGGGAGTATCTAACCAATCAAGAGGCCGTTGATATTGTGCAGAGCTGCCCCCGTAATGGAATTGCAAGAAAACTAGTGAAAGCAGCACTGTGTGAAGCCGCAAAGAAGAGAGAAATGAGATACTCAGATTTGAAGAAGATAGATAGAGGAGTGAGAAGACATTTTCATGATGATATAACAGTCATCGTGGTGTTCCTTGATTCCCACCTCATCAGCAGGAGCTCATGGCGTGGCCCTCTGCTTTCAATCAGATGGGGAAGTGGAGTTTCTGTCGAATCTTAG 1173 43.99 MVSDTLMKIVSPCWRPSVEGENSSRGGDSNRGRVDGLLWYKDSGRHMNGEFSMAVIQANNLLEDHSQLESGPVSLSESGPLGTFVGIYDGHGGPEAAQFVNDHLFNYIRTIHGAELTSENRGLSAEVINKAFLATEEEFLSLVKKQWADKPQIASVGSCCLVGIICGGFLYIANAGDSRVVLGRLEKTVKEVKAIQLSTEHNASMESVREELRSTHPDDPQIVVLKHKVWRVKGLIQVSRSIGDAYLKKAEFNREPLLSKFRLPQPFEKPILKAEPTISVEKLYPEDQFLVFASDGLWEYLTNQEAVDIVQSCPRNGIARKLVKAALCEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSHLISRSSWRGPLLSIRWGSGVSVES 390
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 23792711 23795203 + Bpe016567.1 Bpe04g01861 103670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g01861 390 Gene3D - 40 372 IPR036457 -
Bpe04g01861 390 Pfam Protein phosphatase 2C 82 330 IPR001932 -
Bpe04g01861 390 SUPERFAMILY PP2C-like 76 364 IPR036457 -
Bpe04g01861 390 SMART PP2C_4 44 361 IPR001932 -
Bpe04g01861 390 CDD PP2Cc 51 363 IPR001932 -
Bpe04g01861 390 ProSitePatterns PPM-type phosphatase domain signature. 84 92 IPR000222 GO:0043169
Bpe04g01861 390 PANTHER PROTEIN PHOSPHATASE 2C 38-RELATED 8 385 - -
Bpe04g01861 390 ProSiteProfiles PPM-type phosphatase domain profile. 50 363 IPR001932 -
Bpe04g01861 390 PANTHER ALPHABET, ISOFORM E-RELATED 8 385 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01598 Bpe-Chr4:22202765 Bpe04g01861 Bpe-Chr4:23792711 1.38E-172 dispersed
Bpe04g01861 Bpe-Chr4:23792711 Bpe07g00712 Bpe-Chr7:13703790 0 dispersed
Bpe14g00836 Bpe-Chr14:6277951 Bpe04g01861 Bpe-Chr4:23792711 6.21E-37 dispersed
Bpe15g01084 Bpe-Chr15:20034102 Bpe04g01861 Bpe-Chr4:23792711 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g01861 K01102 - qsu:112015813 663.299