Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g01877 CTAATGGCTGAGGTTCCTCAGCGTACTATGGAAGAGACGCCTACATGGGCGGTCGCCGTAGTTTGCTTTGTACTCATCGTTATATCAATCTTTATCGAACACATCATTCACCTCATAGGAAAGTGGTTAACGAAGAAACACAAAGCAGCTCTTTATGAAGCTCTAGAAAAGGTCAAAGCAGAGCTTATGCTGCTGGGATTTATCTCCTTGCTGCTAACAGTATTACAGAGTCCCATCTCTGAAATCTGTATTTCTAAGAAAGTTGGAAACACTTGGCTTCCTTGTAGCACACAAGATATTCAGAAAAAGGCAGCAGCCAAAGGTGGAAGGAGACTTCTTCAATTTCTAGGCTCTGGATCGAGTCCTAGAAGAATATTAGCCGCGAAGGGATATGATAAATGCGCTGAAAAGGCAAGAACAAATCAATTTTCTGGTAAAGTAGCTTTTATGTCTGCTTATGCTATTCACCAGCTTCATATCTTCATCTTTGTGTTAGCTGCTTTCCATGTCCTTTACTGCATTGCAACTTTGGCTTTGGGTAGAACAAAGATGAGAAAGTGGAAGGGATGGGAGGATGAAACAAAGACAATAGAATACCAATACTACAATGATCCTGCAAGGTTTCGGTTTGCGAGAGATACAACATTTGGGCGCCGACACTTGAGCACTTGGAGTCGTACAACAGTATCTATTTGGATAGTTTGCTTCTTCAGACAATTCTTCAGATCCGTCACTAAAGTGGATTACCTGACATTAAGACACGGATTCATCATGGCGCATTTGGCCCCGGGAAGTGAAACCAAGTTCGACTTTCAAAATTACATAAACAGATCTCTGGAAGAGGATTTCAAAGTAGTGGTGGGAATCAGCCCGGCTATGTGGTTATGTGCTGTTCTGTTCCTCATAACCAATGCATACGGATGGCATGCATACCTATGGCTTCCATTTATATCTTTGATTGTTATTCTGCTAGTGGGAACTAAGCTACAAGTGATTATTACGAAGCTGGGGGTGAGAATCCAAGAGAGGGGCGATGTGGTGAAGGGTGCCCCCGTGGTTCAGCCCGGCGATGATCTTTTCTGGTTCGGTCGCCCCAAGTTCATGCTCTTTTTGATCAACTTCGTTCTTTTTCAGTTTCAGAATGCATTTCAACTCGCCTTCTTCGTATGGAGCACGCTGATTTGGGTCTACTTTCTTTTCATCTCTTTTCAGTTAACATTTACTTTGAGATCTTGCTTTCACAAGAACACGGAAGATATTGTCATCAGGATCTCGCTCGGGATCATTATTCAAGTTCTTTGCAGCTATGTAACCCTCCCTCTCTATGCTCTTGTCACTCAGATGGGTTCTACCATGAGACCGACCATTTTCAACGACCGGGTTGCCGCTGCTCTGAAGAATTGGCACCACTCGGCCAAGAAAAACACGAGACAACACCGCCACTCTGAGTCGAACACGCCCTTATCAAGTCGACCGGGAACTCCATCACACAACATGTCTCCCATGCATCTTCTCCACAACTACAATCAAAGCAGCACTTCTCCTCGGATGTCCGATGTTGATAACGAGCACTGGCATGTAGAGGAAGAGGACTCTTCCCGGCCCCACCATCGCATGCCGAAGGGTGACGGCGGACAAATTGAGGAAGAGAGACAAATGCAAGAGTTAAGGTCGATGGGACCTTCGTCCGGTTCCCCCCGTCCCATTCGAACGCAACATGAAATTGACATGAGTTCATCTGACTTTTCATTTGCAAAATGA 1761 44.86 LMAEVPQRTMEETPTWAVAVVCFVLIVISIFIEHIIHLIGKWLTKKHKAALYEALEKVKAELMLLGFISLLLTVLQSPISEICISKKVGNTWLPCSTQDIQKKAAAKGGRRLLQFLGSGSSPRRILAAKGYDKCAEKARTNQFSGKVAFMSAYAIHQLHIFIFVLAAFHVLYCIATLALGRTKMRKWKGWEDETKTIEYQYYNDPARFRFARDTTFGRRHLSTWSRTTVSIWIVCFFRQFFRSVTKVDYLTLRHGFIMAHLAPGSETKFDFQNYINRSLEEDFKVVVGISPAMWLCAVLFLITNAYGWHAYLWLPFISLIVILLVGTKLQVIITKLGVRIQERGDVVKGAPVVQPGDDLFWFGRPKFMLFLINFVLFQFQNAFQLAFFVWSTLIWVYFLFISFQLTFTLRSCFHKNTEDIVIRISLGIIIQVLCSYVTLPLYALVTQMGSTMRPTIFNDRVAAALKNWHHSAKKNTRQHRHSESNTPLSSRPGTPSHNMSPMHLLHNYNQSSTSPRMSDVDNEHWHVEEEDSSRPHHRMPKGDGGQIEEERQMQELRSMGPSSGSPRPIRTQHEIDMSSSDFSFAK 586
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 23864635 23868522 + Bpe016581.1 Bpe04g01877 103686

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g01877 586 MobiDBLite consensus disorder prediction 519 555 - -
Bpe04g01877 586 Pfam Mlo family 8 508 IPR004326 GO:0006952|GO:0016021
Bpe04g01877 586 MobiDBLite consensus disorder prediction 556 586 - -
Bpe04g01877 586 PANTHER MLO-LIKE PROTEIN 1 6 585 IPR004326 GO:0006952|GO:0016021
Bpe04g01877 586 PANTHER MLO-LIKE PROTEIN 6 585 - -
Bpe04g01877 586 MobiDBLite consensus disorder prediction 482 518 - -
Bpe04g01877 586 MobiDBLite consensus disorder prediction 472 586 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g01877 K08472 MLO; mlo protein - jre:108980000 778.859
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01877 Bpe-Chr4:23864635 Bpe10g00204 Bpe-Chr10:6969332 2.92E-163 dispersed
Bpe13g00411 Bpe-Chr13:11809069 Bpe04g01877 Bpe-Chr4:23864635 5.37E-91 dispersed
Bpe01g00178 Bpe-Chr1:1079511 Bpe04g01877 Bpe-Chr4:23864635 0 wgd
Bpe11g00805 Bpe-Chr11:6022743 Bpe04g01877 Bpe-Chr4:23864635 3.04E-144 wgd
Bpe15g01067 Bpe-Chr15:19931958 Bpe04g01877 Bpe-Chr4:23864635 0 wgd
Bpe04g01877 Bpe-Chr4:23864635 Bpe08g00147 Bpe-Chr8:792432 2.13E-42 wgd
Bpe04g01877 Bpe-Chr4:23864635 Bpe08g01330 Bpe-Chr8:14501100 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi13g491 . . . Bda15g00172 . . Bma03g00332 . . Cmo04g01433 Cma04g01359 . Car04g01437 . . . . . . . . . . . Cla05g02133 Cam05g2289 Cec05g2309 Cco05g2351 Clacu05g2283 Cmu05g2147 Cre05g2268 . . . . . . . Cme10g00061 Blo13g00727 . Bda14g00343 . Bpe04g01877 . . Bma08g00944 . . . . . . . Cpe01g01228 . . . . . . . . . . . . . . . Lsi04g00059 . . .
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bpe11g00487 CCT 3 535 MLO family AT5G53760 67.3 1.0e-206 716.5
Bpe08g01029 CCT 5 529 MLO family AT5G53760 62.0 8.3e-193 670.2
Bpe08g01331 CCT,ECH 13 449 MLO family AT3G45290 58.0 2.1e-139 492.7
Bpe11g00805 CCT,ECH 10 424 MLO family AT3G45290 54.7 1.2e-123 440.3
Bpe11g00487 CCT 3 535 MLO family AT1G26700 64.9 4.5e-196 681.0
Bpe08g01029 CCT 9 529 MLO family AT1G26700 62.6 8.6e-187 650.2
Bpe04g01877 . 5 518 MLO family AT2G39200 69.2 7.0e-200 693.7
Bpe15g01067 . 5 494 MLO family AT2G39200 69.3 1.0e-195 679.9
Bpe08g01330 BCT 8 566 MLO family AT2G39200 59.3 3.2e-184 641.7
Bpe01g00178 BCT 9 411 MLO family AT2G39200 64.0 1.3e-142 503.4
Bpe02g01762 BCT 13 462 MLO family AT2G39200 51.1 8.2e-124 441.0
Bpe15g01067 . 1 407 MLO family AT1G61560 68.4 6.7e-160 560.5
Bpe04g01877 . 4 427 MLO family AT1G61560 65.4 1.0e-155 546.6
Bpe08g01330 BCT 8 439 MLO family AT1G61560 62.3 3.1e-149 525.0
Bpe01g00178 BCT 9 391 MLO family AT1G61560 68.1 1.0e-147 520.0
Bpe10g00204 . 28 415 MLO family AT1G61560 52.9 1.8e-117 419.5
Bpe02g01762 BCT 13 404 MLO family AT1G61560 51.2 8.0e-113 404.1
Bpe08g00147 . 9 318 MLO family AT1G61560 59.9 7.5e-95 344.4
Bpe10g00204 . 10 465 MLO family AT2G17430 68.2 9.6e-175 610.1
Bpe02g01762 BCT 10 468 MLO family AT2G17430 61.5 4.8e-158 554.7
Bpe01g00178 BCT 3 390 MLO family AT2G17430 50.8 2.9e-102 369.4
Bpe10g00204 . 4 562 MLO family AT2G17480 62.4 8.9e-190 660.2
Bpe02g01762 BCT 13 467 MLO family AT2G17480 64.0 3.2e-163 572.0
Bpe01g00178 BCT 9 390 MLO family AT2G17480 51.6 2.6e-101 366.3
Bpe02g01762 BCT 13 369 MLO family AT1G42560 65.4 2.4e-132 468.8
Bpe10g00204 . 28 380 MLO family AT1G42560 58.8 3.9e-114 408.3
Bpe11g01705 . 1 397 MLO family AT4G24250 60.0 2.7e-129 458.8
Bpe05g00926 . 6 433 MLO family AT4G24250 51.7 3.7e-115 411.8
Bpe12g00321 . 5 392 MLO family AT4G24250 52.0 6.2e-102 367.9
Bpe10g00204 . 5 380 MLO family AT5G65970 69.1 4.9e-146 514.6
Bpe02g01762 BCT 7 369 MLO family AT5G65970 62.9 2.1e-128 456.1
Bpe02g01762 BCT 13 495 MLO family AT2G33670 65.8 3.9e-178 621.3
Bpe10g00204 . 28 463 MLO family AT2G33670 62.9 3.6e-152 535.0
Bpe01g00178 BCT 3 390 MLO family AT2G33670 50.1 7.7e-102 367.9
Bpe04g01877 . 63 518 MLO family AT1G11310 65.7 1.0e-170 596.7
Bpe15g01067 . 63 494 MLO family AT1G11310 65.4 3.1e-167 585.1
Bpe08g01330 BCT 63 531 MLO family AT1G11310 59.9 6.7e-154 540.8
Bpe01g00178 BCT 64 391 MLO family AT1G11310 65.8 1.1e-122 437.2
Bpe02g01762 BCT 68 457 MLO family AT1G11310 51.1 1.7e-104 376.7
Bpe05g00926 . 1 517 MLO family AT2G44110 57.4 5.2e-159 557.8
Bpe12g00321 . 1 480 MLO family AT2G44110 58.1 9.2e-156 547.0
Bpe05g00926 . 1 500 MLO family AT4G02600 69.9 7.1e-199 690.3
Bpe12g00321 . 1 460 MLO family AT4G02600 58.2 5.9e-153 537.7
Bpe11g01705 . 8 468 MLO family AT4G02600 54.2 2.0e-137 486.1
Bpe13g00411 BCT 1 458 MLO family AT1G11000 53.2 3.3e-133 472.2
Bpe05g00926 . 1 500 MLO family AT4G02600 69.9 7.1e-199 690.3
Bpe12g00321 . 1 460 MLO family AT4G02600 58.2 5.9e-153 537.7
Bpe11g01705 . 8 468 MLO family AT4G02600 54.2 2.0e-137 486.1
Bpe04g01877 . 63 518 MLO family AT1G11310 65.7 1.0e-170 596.7
Bpe15g01067 . 63 494 MLO family AT1G11310 65.4 3.1e-167 585.1
Bpe08g01330 BCT 63 531 MLO family AT1G11310 59.9 6.7e-154 540.8
Bpe01g00178 BCT 64 391 MLO family AT1G11310 65.8 1.1e-122 437.2
Bpe02g01762 BCT 68 457 MLO family AT1G11310 51.1 1.7e-104 376.7
Bpe08g01331 CCT,ECH 13 449 MLO family AT3G45290 58.0 2.1e-139 492.7
Bpe11g00805 CCT,ECH 10 424 MLO family AT3G45290 54.7 1.2e-123 440.3
Bpe13g00411 BCT 1 458 MLO family AT1G11000 53.2 3.3e-133 472.2
Bpe02g01762 BCT 13 495 MLO family AT2G33670 65.8 3.9e-178 621.3
Bpe10g00204 . 28 463 MLO family AT2G33670 62.9 3.6e-152 535.0
Bpe01g00178 BCT 3 390 MLO family AT2G33670 50.1 7.7e-102 367.9
Bpe15g01067 . 1 407 MLO family AT1G61560 68.4 6.7e-160 560.5
Bpe04g01877 . 4 427 MLO family AT1G61560 65.4 1.0e-155 546.6
Bpe08g01330 BCT 8 439 MLO family AT1G61560 62.3 3.1e-149 525.0
Bpe01g00178 BCT 9 391 MLO family AT1G61560 68.1 1.0e-147 520.0
Bpe10g00204 . 28 415 MLO family AT1G61560 52.9 1.8e-117 419.5
Bpe02g01762 BCT 13 404 MLO family AT1G61560 51.2 8.0e-113 404.1
Bpe08g00147 . 9 318 MLO family AT1G61560 59.9 7.5e-95 344.4
Bpe10g00204 . 10 465 MLO family AT2G17430 68.2 9.6e-175 610.1
Bpe02g01762 BCT 10 468 MLO family AT2G17430 61.5 4.8e-158 554.7
Bpe01g00178 BCT 3 390 MLO family AT2G17430 50.8 2.9e-102 369.4
Bpe10g00204 . 4 562 MLO family AT2G17480 62.4 8.9e-190 660.2
Bpe02g01762 BCT 13 467 MLO family AT2G17480 64.0 3.2e-163 572.0
Bpe01g00178 BCT 9 390 MLO family AT2G17480 51.6 2.6e-101 366.3
Bpe02g01762 BCT 13 369 MLO family AT1G42560 65.4 2.4e-132 468.8
Bpe10g00204 . 28 380 MLO family AT1G42560 58.8 3.9e-114 408.3
Bpe10g00204 . 5 380 MLO family AT5G65970 69.1 4.9e-146 514.6
Bpe02g01762 BCT 7 369 MLO family AT5G65970 62.9 2.1e-128 456.1
Bpe11g00487 CCT 3 535 MLO family AT5G53760 67.3 1.0e-206 716.5
Bpe08g01029 CCT 5 529 MLO family AT5G53760 62.0 8.3e-193 670.2
Bpe04g01877 . 5 518 MLO family AT2G39200 69.2 7.0e-200 693.7
Bpe15g01067 . 5 494 MLO family AT2G39200 69.3 1.0e-195 679.9
Bpe08g01330 BCT 8 566 MLO family AT2G39200 59.3 3.2e-184 641.7
Bpe01g00178 BCT 9 411 MLO family AT2G39200 64.0 1.3e-142 503.4
Bpe02g01762 BCT 13 462 MLO family AT2G39200 51.1 8.2e-124 441.0
Bpe11g01705 . 1 397 MLO family AT4G24250 60.0 2.7e-129 458.8
Bpe05g00926 . 6 433 MLO family AT4G24250 51.7 3.7e-115 411.8
Bpe12g00321 . 5 392 MLO family AT4G24250 52.0 6.2e-102 367.9
Bpe11g00487 CCT 3 535 MLO family AT1G26700 64.9 4.5e-196 681.0
Bpe08g01029 CCT 9 529 MLO family AT1G26700 62.6 8.6e-187 650.2
Bpe05g00926 . 1 517 MLO family AT2G44110 57.4 5.2e-159 557.8
Bpe12g00321 . 1 480 MLO family AT2G44110 58.1 9.2e-156 547.0
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005733 2 1 2 2 2 1 2 1 1 1 1 1 2 1 1 2 1 0 2 1 1 1 1 1 1 1 1 2 3 0 39
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe04g01877 Bpe_Chr04 FPKM 10.188946 10.135908 8.16792 9.000583 1.499256 1.515787 1.057662 2.996332 2.645131 2.851657