Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g01879 ATGACTTCCAACACCTTAATGAGCTGCGGAATTACAGCAGTGGCCTACCCGTCCGTCCTCTCGTCGTCCAAATCGAAGTTTGCCGCCGCATTTTCACTTCCTTCCGGCTATGCCAATGCGTCGTCGCGCTTCTCCATGTCAGCCGAGTGGATGCCCGGCCAGCCCAGACCTCCATACCTGGATGGCTCAGCTCCAGGAGATTTTGGGTTTGATCCACTTGGATTGGGTGAAGTTCCAGAGAATCTGGAGAGATTCAAAGAGTCTGAACTCATCCATTGCAGATGGGCTATGCTCGCCGTACCAGGGGTCCTACTTCCAGAGGCATTGGGGTTAGGCAACTGGGTGAAGGCCCAAGAGTGGGCGGCAATTCCCGGCGGCCAAGCCACCTACCTGGGGCAGCCAGTTCCTTGGGGTACATTACCCATAATTTTGGTCATCGAGTTCCTCGCCATTGCTTTCGTAGAGCACCAACGCAGCATGGAAAAAGACACAGAAAAGAAGAAATACCCCGGCGGCGCATTTGATCCCCTGGGCTTCTCCAAAGACCCTGCAAAGTTCAAGGAATACAAAGTCAAAGAGATTAAAAATGGTCGGCTGGCGCTGCTGGCATTTGTTGGGTTCTGTGTGCAGCAATCTGCCTACCCAGGCACAGGGCCGTTGGAGAACTTGGCCACTCACTTGGCTGACCCATGGCACAACAACATCGGCGATATCATCATTCCAAGAGGGGTTTTGCCTTGA 741 53.58 MTSNTLMSCGITAVAYPSVLSSSKSKFAAAFSLPSGYANASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAVPGVLLPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPIILVIEFLAIAFVEHQRSMEKDTEKKKYPGGAFDPLGFSKDPAKFKEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRGVLP 246
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 23879251 23880400 + Bpe016583.1 Bpe04g01879 103688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g01879 246 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 6, CHLOROPLASTIC 22 237 - -
Bpe04g01879 246 Pfam Chlorophyll A-B binding protein 57 211 IPR022796 -
Bpe04g01879 246 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 22 237 IPR001344 GO:0009765|GO:0016020
Bpe04g01879 246 SUPERFAMILY Chlorophyll a-b binding protein 39 240 - -
Bpe04g01879 246 Gene3D Chlorophyll a/b binding protein domain 51 237 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe04g01879 Bpe15g01065 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g01003 Bpe-Chr3:29538794 Bpe04g01879 Bpe-Chr4:23879251 9.20E-40 dispersed
Bpe04g01879 Bpe-Chr4:23879251 Bpe12g00541 Bpe-Chr12:11278473 6.22E-47 dispersed
Bpe15g01065 Bpe-Chr15:19919108 Bpe04g01879 Bpe-Chr4:23879251 1.03E-175 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g01879 K08907 - pvy:116130060 461.455