Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g01899 ATCACCAGCAGATGGTTTGTTATTTTTGCTTCTCTTCTGATCATGTCTGCAGCCGGAGCCACGTACATGTTCGCACTCTACTCCGGCGATATAAAATCTGTTCTTGGTTACGATCAAACCACCCTAAATCTTCTCAGTTTCTTCAAAGACTTGGGTGCCAACGTCGGAGTTCTCTCCGGCCTGATAAATGAGGTCACTCCACCGTGGGTGGTCCTGTCCATCGGAGCCGGACTCAACTTTTTCGGTTACTTCATGATTTGGCTAGCCGTTACGAAGAGAATCAAGACGCCGGCGGTGTGGCATATGTGTTTATACATCTGCATCGGAGCAAATTCTCAGTCTTTCGCAAACACTGGTTCGCTCGTCACCTGCGTGAAGAATTTCCCGGAGAGTCGAGGAGTGGTGCTCGGACTTTTAAAAGGGTACGTAGGATTAAGCGGCGCTATTATTACACAGCTTTACCATGGTTTCTACGGAGACGATTCGAAAGCTTTGATTTTGCTCATCGGGTGGCTTCCGGCAGCTATTTCCGTCGCTTTTCTTCGAACTATTCGGATCATGAAAGTTGTCCGGCAGGCGAATGAGCTCAAAGTTTTCTATAATATGCTTTACATTTCGTTGGGCCTCGCTGGGTTTCTCATGGTGATGATTATCATCCAGAAGCAAGCGCATTTTAACAGGACTGAGTACGGCGGAAGTGCGGCGGCGGTGCTTTTTCTTCTCTTTCTTCCTCTCTCGGTCGTTGTTTTCGAGGAGTATTGTATACTGAAAACGGAGAAGATGAAGACCGAAAACCATCAACCACCTCCTGAGACAGCCATAGCCGTTTCTTCTACAAATCCAAATCAAGAAGCGGTGCTGAAAGAGAGAGAGAATCAAACGACCGATGGAATTTCTTGCTGGAAAACCATTTTTGATCCACCGGAAAGAGGCGAAGACTTCACGATTCTTCAAGCACTTTTCAGTATGGACATGCTAATTCTCTTCTTCACAGCTTTATGCGGAGTAGGAGGAACCCTAACCGCCATTGACAACCTGGGTCAGATAGGAGCTTCTCTAGGGTACCCAAAGAAAAGCATAAGCACATTTGTTTCGCTGGTCAGCATATGGAACTATCTTGGCCGAGTCGTCGCTGGTTTCGTATCGGAAATCTTCCTAACCAAATACAAGTTCCCTCGCCCTCTCATGCTTTCTCTGACCCTCTTACTATCATGTCTCGGCCATCTTCTAATTGCTTTCGACGTCCGGAATGGTCTCTACTTCGCCTCCGTAATTATAGGTTTCTGTTTCGGAGCTCAATGGCCCCTACTTTTCGCCATCATTTCTGAACTTTTCGGGCTCAAATACTACTCCACTCTCTACAATTTCGGGTCAGTGGCCAGTCCGATAGGCCTGTACGCCCTGAACGTGAAGGTCGCCGGAAATTTGTACGACAGAGAAGCTAAGAAACAAATGGCTGCTCTAGGGCTTCGCAGAAAAGCCGGGGAGGAGCTGAAATGCACCGGTGGAGAGTGTTTTAAGCTGTCTTTCATAATAATTACTGCAGTGACTTTGCTGGGGGCTATTGTTTCTCTGGTTTTAGTGATGAGGACGAAGAAGTTCTATAAAAGTGATATATACAGAAAGTTTAGGGAAGAAGATGACGGTAGGCACGGCGGTGAGGCAGAGATGGAGCTGGCTAGAAATGGAGGGGGAGCTCATGAAACTAAAAAG 1713 46.99 ITSRWFVIFASLLIMSAAGATYMFALYSGDIKSVLGYDQTTLNLLSFFKDLGANVGVLSGLINEVTPPWVVLSIGAGLNFFGYFMIWLAVTKRIKTPAVWHMCLYICIGANSQSFANTGSLVTCVKNFPESRGVVLGLLKGYVGLSGAIITQLYHGFYGDDSKALILLIGWLPAAISVAFLRTIRIMKVVRQANELKVFYNMLYISLGLAGFLMVMIIIQKQAHFNRTEYGGSAAAVLFLLFLPLSVVVFEEYCILKTEKMKTENHQPPPETAIAVSSTNPNQEAVLKERENQTTDGISCWKTIFDPPERGEDFTILQALFSMDMLILFFTALCGVGGTLTAIDNLGQIGASLGYPKKSISTFVSLVSIWNYLGRVVAGFVSEIFLTKYKFPRPLMLSLTLLLSCLGHLLIAFDVRNGLYFASVIIGFCFGAQWPLLFAIISELFGLKYYSTLYNFGSVASPIGLYALNVKVAGNLYDREAKKQMAALGLRRKAGEELKCTGGECFKLSFIIITAVTLLGAIVSLVLVMRTKKFYKSDIYRKFREEDDGRHGGEAEMELARNGGGAHETKK 571
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 23981310 23983022 + Bpe025726 Bpe04g01899 103708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g01899 571 SUPERFAMILY MFS general substrate transporter 4 535 IPR036259 -
Bpe04g01899 571 Pfam Nodulin-like 4 249 IPR010658 -
Bpe04g01899 571 PANTHER MFS TRANSPORTER 1 551 - -
Bpe04g01899 571 MobiDBLite consensus disorder prediction 550 571 - -
Bpe04g01899 571 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 1 551 - -
Bpe04g01899 571 CDD MFS_Mch1p_like 3 521 - -
Bpe04g01899 571 Gene3D MFS general substrate transporter like domains 304 536 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01899 Bpe-Chr4:23981310 Bpe12g00478 Bpe-Chr12:10548838 1.25E-100 dispersed
Bpe07g00801 Bpe-Chr7:14378920 Bpe04g01899 Bpe-Chr4:23981310 6.03E-97 transposed
Bpe01g00214 Bpe-Chr1:1324768 Bpe04g01899 Bpe-Chr4:23981310 0 wgd
Bpe15g01342 Bpe-Chr15:21536455 Bpe04g01899 Bpe-Chr4:23981310 0 wgd
Bpe15g01047 Bpe-Chr15:19813645 Bpe04g01899 Bpe-Chr4:23981310 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g01899 - - mnt:21400048 838.95