Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g01911 ATGTTGGCCATGGAGAAGGATTTTGATTCAAAGTTGAGCATTCAAGGAAACTCCTCTAATGGAGCAAATGTTCAGAGATCTAAAAGCTTTGCGTTTCGAGCTCCGCAGGAAAATTTCAGAATCCATGATTTTGAATTGGGGAAGATATACGGCGTCGGATCGTATTCTAAGGTTGTGAGGGCGAAGAAGAAAGATTCGGGAATGATCTATGCATTGAAGATAATGGACAAAAAATTCATCACTAAAGAAAATAAAACTGCTTATGTGAAATTAGAACGGATTGTTCTTGACCAGTTGGATCATCCGGGGGTTGTGAAGCTGTACTTCACATTTCAAGATACTTTTTCACTGTACATGGCGCTTGAATCCTGCGAAGGTGGTGAACTTTTTGATCAGATAATCAGGAAAGGTCGTTTGTCGGAGGATGAAGCTCGCTTTTATGCAGCAGAAGTTGTGGATGCTCTTGAGTATATACACAGTATGGGATTGATACATCGAGATATTAAGCCTGAGAATTTGCTATTTACTGCTGATGGGCATATTAAAATTGCCGATTTTGGAAGCGTGAAGCCGATGGAGGGTAGCCAAATTACTGTCCTACCTAATGCGGCTTCAGATGATAAGGCTTGTACATTTGTGGGCACAGCTGCATATGTTCCTCCAGAAGTCCTGAATTCTTCACCTGCAACTTTTGGAAATGACTTATGGGCTCTGGGCTGCACCTTGTACCAAATGCTTTCTGGAACCTCTCCTTTTAAAGATGCAAGTGAGTGGCTTATTTTCCAAAGAATTATAGCCAGAGATATCAAATTTCCAAATTACTTTTCAGCGGAAGCTAGAGATCTCATTGATCGATTATTGGATTTAGATCCGAGTAGAAGACCAGGGGCTGGACCAGATGGTTATGCTGCAATCAAGACTCATCCTTTCTTTAAGGGAGTCGACTGGAAAAACATTAGACGGATGTCTCCTCCAAAGCTTGCTATGGATTCTGCAGCACAATCGAGTGATGGTAGTGACGGCCATGATTCTTTGTGGAACCCAACTCACATTGGAGATGGTGCAGTGAGGTCTAATGACAGTCCCGGAGCCGTAGATGGGGCATCATCTTCCGAACCAACCCAACCCGTAACTAGGCTTGCTTCCATTGACTCCTTTGATTCAAAATGGCAACAATTCTTGGAGCCTGGAGAATCTGTTGTTATGATCTCAATGGTGAAGAAAATCCAGAAGCTAAGCAGCAAAAAGGTGCAGCTTATACTCACTAACAAACCCAAATTAATTTATTTGGATCCAACCAAAATGATTGTCAAAGGCAACATCGTCTGGTCGAACAAACCCGGCGACCTCTCCGTTCAAGTTTCCAGTCCTTCCCATTTCAAGATTTTTTCGCCGAAGAAAGTCTTCTCGTTCGAGGACTCAAAGCAGAGAGCATGGCAGTGGAAGAAGACGATCGAGGGGCTGCAAAACCAGTGA 1476 43.02 MLAMEKDFDSKLSIQGNSSNGANVQRSKSFAFRAPQENFRIHDFELGKIYGVGSYSKVVRAKKKDSGMIYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVKLYFTFQDTFSLYMALESCEGGELFDQIIRKGRLSEDEARFYAAEVVDALEYIHSMGLIHRDIKPENLLFTADGHIKIADFGSVKPMEGSQITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDASEWLIFQRIIARDIKFPNYFSAEARDLIDRLLDLDPSRRPGAGPDGYAAIKTHPFFKGVDWKNIRRMSPPKLAMDSAAQSSDGSDGHDSLWNPTHIGDGAVRSNDSPGAVDGASSSEPTQPVTRLASIDSFDSKWQQFLEPGESVVMISMVKKIQKLSSKKVQLILTNKPKLIYLDPTKMIVKGNIVWSNKPGDLSVQVSSPSHFKIFSPKKVFSFEDSKQRAWQWKKTIEGLQNQ 491
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 24079830 24083468 + Bpe016613.1 Bpe04g01911 103720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g01911 491 CDD STKc_PDK1 42 311 IPR039046 GO:0004674
Bpe04g01911 491 SUPERFAMILY Protein kinase-like (PK-like) 27 332 IPR011009 -
Bpe04g01911 491 ProSiteProfiles Protein kinase domain profile. 44 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe04g01911 491 Pfam Protein kinase domain 46 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe04g01911 491 MobiDBLite consensus disorder prediction 363 377 - -
Bpe04g01911 491 SUPERFAMILY PH domain-like 305 490 - -
Bpe04g01911 491 Gene3D Transferase(Phosphotransferase) domain 1 128 324 - -
Bpe04g01911 491 Gene3D - 364 491 IPR011993 -
Bpe04g01911 491 PANTHER 3-PHOSPHOINOSITIDE-DEPENDENT PROTEIN KINASE 1 18 487 - -
Bpe04g01911 491 PANTHER SERINE/THREONINE-PROTEIN KINASE 18 487 - -
Bpe04g01911 491 Pfam PH domain 388 490 IPR033931 -
Bpe04g01911 491 MobiDBLite consensus disorder prediction 327 377 - -
Bpe04g01911 491 Gene3D Phosphorylase Kinase; domain 1 42 127 - -
Bpe04g01911 491 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672|GO:0006468
Bpe04g01911 491 MobiDBLite consensus disorder prediction 329 343 - -
Bpe04g01911 491 SMART serkin_6 44 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01911 Bpe-Chr4:24079830 Bpe12g00570 Bpe-Chr12:11520406 1.16E-66 dispersed
Bpe01g00564 Bpe-Chr1:3662149 Bpe04g01911 Bpe-Chr4:24079830 1.67E-08 transposed
Bpe04g01652 Bpe-Chr4:22632703 Bpe04g01911 Bpe-Chr4:24079830 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63340 PF00069 Pkinase 4.30E-66 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g01911 K06276 - mnt:21388684 826.624