Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g01919 TACGAGAAGGTCGAAAAGATTGGTGAAGGAACCTATGGCGTCGTTTACAAGGCTCGTGACCGCGTCACTAATGAGACAATTGCTTTGAAGAAGATTCGCTTGGAGCAGGAAGATGAGGGAGTTCCGAGCACGGCAATACGAGAAATTTCACTCTTGAAAGAAATGCAGCATGGAAACATTGTTAGGTTGCAGGATGTAGTGCACAGTGAAAAGCGTTTATATCTTGTTTTTGAGTACCTGGATCTGGATCTGAAAAAGCACATGGATTCCTCTCCAGAATTTTCCAAGGATCTGCGTCAAATTAAAATGTTCCTTTACCAAATTCTTCGTGGTATTGCTTACTGTCATTCTCATAGAGTTCTTCATAGAGATCTGAAACCTCAAAACTTGCTGATAGACAGGCGTACCAACTCACTGAAGCTTGCTGATTTTGGACTGGCTAGAGCATTTGGTATTCCTGTTAGGACATTTACACATGAGGTTGTGACTCTCTGGTACAGAGCTCCAGAAATATTGCTTGGATCTCGCCACTACTCCACCCCTGTTGATGTGTGGTCTGTTGGTTGTATATTTGCTGAAATGCTGAATCAAAAGCCATTATTCCCTGGGGATTCGGAGATTGATGAATTGTTTAAGATATTCAGAGTGTTGGGCACTCCAAATGACGAAACTTGGCCTGGAGTGACTTCGTTGCCCGATTTTAAATCTGCCTTCCCGAAGTGGCTTTCTCAGGACATGGCTTCTGTTGTTCCAACTCTTGAATCAACTGGTGTTGATCTTCTGTCTAAAATGCTCTGCTTGGATCCCACCAAACGAATTACAGCCAGGAGCGCTCTTGAGCATGAATACTTTAAAGACGCCACGTTTGTGCCCTGA 876 43.61 YEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPEFSKDLRQIKMFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNSLKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMLNQKPLFPGDSEIDELFKIFRVLGTPNDETWPGVTSLPDFKSAFPKWLSQDMASVVPTLESTGVDLLSKMLCLDPTKRITARSALEHEYFKDATFVP 291
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 24144143 24147836 + Bpe016621.1 Bpe04g01919 103728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g01919 291 CDD STKc_CDK1_CdkB_like 1 284 - -
Bpe04g01919 291 Gene3D Transferase(Phosphotransferase) domain 1 83 289 - -
Bpe04g01919 291 ProSiteProfiles Protein kinase domain profile. 1 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe04g01919 291 ProSitePatterns Serine/Threonine protein kinases active-site signature. 120 132 IPR008271 GO:0004672|GO:0006468
Bpe04g01919 291 Gene3D Phosphorylase Kinase; domain 1 1 81 - -
Bpe04g01919 291 PANTHER CELL DIVISION PROTEIN KINASE 1 288 - -
Bpe04g01919 291 ProSitePatterns Protein kinases ATP-binding region signature. 7 30 IPR017441 GO:0005524
Bpe04g01919 291 Pfam Protein kinase domain 1 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe04g01919 291 SMART serkin_6 1 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe04g01919 291 PANTHER CYCLIN-DEPENDENT KINASE A-2 1 288 - -
Bpe04g01919 291 SUPERFAMILY Protein kinase-like (PK-like) 1 287 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00538 Bpe-Chr1:3494349 Bpe04g01919 Bpe-Chr4:24144143 1.69E-15 dispersed
Bpe04g01919 Bpe-Chr4:24144143 Bpe05g00263 Bpe-Chr5:15541292 4.23E-70 dispersed
Bpe08g00887 Bpe-Chr8:11271374 Bpe04g01919 Bpe-Chr4:24144143 1.14E-54 dispersed
Bpe11g00362 Bpe-Chr11:2728497 Bpe04g01919 Bpe-Chr4:24144143 7.49E-67 dispersed
Bpe02g00294 Bpe-Chr2:1938496 Bpe04g01919 Bpe-Chr4:24144143 2.30E-117 transposed
Bpe07g00306 Bpe-Chr7:2228421 Bpe04g01919 Bpe-Chr4:24144143 2.94E-121 transposed
Bpe10g00280 Bpe-Chr10:10134916 Bpe04g01919 Bpe-Chr4:24144143 5.74E-51 transposed
Bpe13g00523 Bpe-Chr13:12528385 Bpe04g01919 Bpe-Chr4:24144143 1.33E-89 transposed
Bpe15g01030 Bpe-Chr15:19691475 Bpe04g01919 Bpe-Chr4:24144143 7.42E-171 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63341 PF00069 Pkinase 1.30E-81 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g01919 K02206 - mnt:21397004 560.836