Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe04g01926 | ATGGGGTCTGATCACCCACTTCCCGGATGGGCTTCAAAGCCTTGCATTATGGGTATTGATGAAGCCGGTCGAGGCCCTGTTCTAGGGCCAATGGTTTACGGGTGCTTGTATTGTTCTCGTTCTTATCAGAAGGCTCTTTTATCTTTGAATTTTGCAGATTCAAAGACGTTAAAGGAAGAAAAGAGGGAAGAGCTATTTGAAATTTTGAAAGCTGATGAATCAATTGGATGGGCTGTTGATGTCATAGATCCAAGGGAACTTTCTGCTAAAATGTTAAAGAAAAATAAGATAAATTTGAACGAAATATCACATGACTCTGCAATGGGACTGGTCACAAGGGTCCTAAACCTGGGAGTTCTTCTCACTGAGGTTTATGTGGACACAGTGGGTGATCCTGAAAAGTACAGATTAAAACTCTCGGAAAGATTTCCATCTATCAAATTTGTTGTTGCTAAGAAGGCTGATAGTCTTTATCCAGTGGTGAGTGGAGCGAGCATAATTGCAAAGGTCACTAGAGACCATGCTTTAAAGGGATGGGTGCTTAGTGAAACTGCTGAAAAAATGCATAGAAATTTTGGTTCCGGATACCCTGGAGATCCTGAAACAAAGGCTTGGTTGGAAGATCACAAACACTCAGTTTTTGGATTTCCAACATTGGTTCGATTCAGTTGGGGTACATGCAATCCATTTTTCAAAAACATGGTTGAAGTTTTATGGGAATGTGACAATGAGGACGGTGAAGACCAGGGTCTGAATGGCAGTATTGGAAAGAAGCAACTGAAGCTAAGCAATGTTGGTTTCACATCATCCAAGAGAAAAAGTGAAGAAGTCGAATCAAATGCTAGAGGGCGCTGTAAGTTCTTCCAGGCTCGAAAACTAGAGCAACTCACTCGCTTCTAA | 900 | 41.56 | MGSDHPLPGWASKPCIMGIDEAGRGPVLGPMVYGCLYCSRSYQKALLSLNFADSKTLKEEKREELFEILKADESIGWAVDVIDPRELSAKMLKKNKINLNEISHDSAMGLVTRVLNLGVLLTEVYVDTVGDPEKYRLKLSERFPSIKFVVAKKADSLYPVVSGASIIAKVTRDHALKGWVLSETAEKMHRNFGSGYPGDPETKAWLEDHKHSVFGFPTLVRFSWGTCNPFFKNMVEVLWECDNEDGEDQGLNGSIGKKQLKLSNVGFTSSKRKSEEVESNARGRCKFFQARKLEQLTRF | 299 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 24185502 | 24192465 | - | Bpe016628.1 | Bpe04g01926 | 103735 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe04g01926 | 299 | ProSiteProfiles | Ribonuclease (RNase) H type-2 domain profile. | 14 | 236 | IPR024567 | GO:0004523 | |
Bpe04g01926 | 299 | Pfam | Ribonuclease HII | 17 | 227 | IPR024567 | GO:0004523 | |
Bpe04g01926 | 299 | TIGRFAM | TIGR00729: ribonuclease HII | 16 | 228 | IPR004649 | GO:0004523|GO:0016070 | |
Bpe04g01926 | 299 | SUPERFAMILY | Ribonuclease H-like | 15 | 232 | IPR012337 | - | |
Bpe04g01926 | 299 | Gene3D | Ribonuclease hii. Domain 2 | 187 | 234 | IPR023160 | GO:0004523 | |
Bpe04g01926 | 299 | CDD | RNase_HII_eukaryota_like | 17 | 236 | - | - | |
Bpe04g01926 | 299 | Gene3D | - | 4 | 186 | IPR036397 | GO:0003676 | |
Bpe04g01926 | 299 | PANTHER | RIBONUCLEASE H2 SUBUNIT A | 7 | 299 | IPR001352 | GO:0003723|GO:0004523 | |
Bpe04g01926 | 299 | PANTHER | RIBONUCLEASE | 7 | 299 | - | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe04g01926 | K10743 | - | csin:114322663 | 511.916 |