Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g01926 ATGGGGTCTGATCACCCACTTCCCGGATGGGCTTCAAAGCCTTGCATTATGGGTATTGATGAAGCCGGTCGAGGCCCTGTTCTAGGGCCAATGGTTTACGGGTGCTTGTATTGTTCTCGTTCTTATCAGAAGGCTCTTTTATCTTTGAATTTTGCAGATTCAAAGACGTTAAAGGAAGAAAAGAGGGAAGAGCTATTTGAAATTTTGAAAGCTGATGAATCAATTGGATGGGCTGTTGATGTCATAGATCCAAGGGAACTTTCTGCTAAAATGTTAAAGAAAAATAAGATAAATTTGAACGAAATATCACATGACTCTGCAATGGGACTGGTCACAAGGGTCCTAAACCTGGGAGTTCTTCTCACTGAGGTTTATGTGGACACAGTGGGTGATCCTGAAAAGTACAGATTAAAACTCTCGGAAAGATTTCCATCTATCAAATTTGTTGTTGCTAAGAAGGCTGATAGTCTTTATCCAGTGGTGAGTGGAGCGAGCATAATTGCAAAGGTCACTAGAGACCATGCTTTAAAGGGATGGGTGCTTAGTGAAACTGCTGAAAAAATGCATAGAAATTTTGGTTCCGGATACCCTGGAGATCCTGAAACAAAGGCTTGGTTGGAAGATCACAAACACTCAGTTTTTGGATTTCCAACATTGGTTCGATTCAGTTGGGGTACATGCAATCCATTTTTCAAAAACATGGTTGAAGTTTTATGGGAATGTGACAATGAGGACGGTGAAGACCAGGGTCTGAATGGCAGTATTGGAAAGAAGCAACTGAAGCTAAGCAATGTTGGTTTCACATCATCCAAGAGAAAAAGTGAAGAAGTCGAATCAAATGCTAGAGGGCGCTGTAAGTTCTTCCAGGCTCGAAAACTAGAGCAACTCACTCGCTTCTAA 900 41.56 MGSDHPLPGWASKPCIMGIDEAGRGPVLGPMVYGCLYCSRSYQKALLSLNFADSKTLKEEKREELFEILKADESIGWAVDVIDPRELSAKMLKKNKINLNEISHDSAMGLVTRVLNLGVLLTEVYVDTVGDPEKYRLKLSERFPSIKFVVAKKADSLYPVVSGASIIAKVTRDHALKGWVLSETAEKMHRNFGSGYPGDPETKAWLEDHKHSVFGFPTLVRFSWGTCNPFFKNMVEVLWECDNEDGEDQGLNGSIGKKQLKLSNVGFTSSKRKSEEVESNARGRCKFFQARKLEQLTRF 299
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 24185502 24192465 - Bpe016628.1 Bpe04g01926 103735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g01926 299 ProSiteProfiles Ribonuclease (RNase) H type-2 domain profile. 14 236 IPR024567 GO:0004523
Bpe04g01926 299 Pfam Ribonuclease HII 17 227 IPR024567 GO:0004523
Bpe04g01926 299 TIGRFAM TIGR00729: ribonuclease HII 16 228 IPR004649 GO:0004523|GO:0016070
Bpe04g01926 299 SUPERFAMILY Ribonuclease H-like 15 232 IPR012337 -
Bpe04g01926 299 Gene3D Ribonuclease hii. Domain 2 187 234 IPR023160 GO:0004523
Bpe04g01926 299 CDD RNase_HII_eukaryota_like 17 236 - -
Bpe04g01926 299 Gene3D - 4 186 IPR036397 GO:0003676
Bpe04g01926 299 PANTHER RIBONUCLEASE H2 SUBUNIT A 7 299 IPR001352 GO:0003723|GO:0004523
Bpe04g01926 299 PANTHER RIBONUCLEASE 7 299 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g01926 K10743 - csin:114322663 511.916