Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g01931 ATGAGGGTGTCTGCGGAAATGGGCAGTGATTTTCTCAGGGAAAGAGCGGCAATGATGAGAGAGTCTCTGCTGAAGAGCCAGACTATTACGGAAAACGTTGTCTCTATTCTTGGCTCTTTTGATCATCGTCTCTCTGCCCTAGAGACTGCCATGCGACCCACTCAGATCAGAACTCACTCTATTCGCAAAGCTCATGAGAATATTGATAAAACGCTGAAAGCTGCAGAAGGTATACTGGGAAAGTTTGATATTTCACGTCAGGCCGAAGTGAAAATACTTAAAGGGCCGCATGAAGATTTGGAGAGTTACTTGGAAGCAATTGATCAACTTAGAGGCAATATTCAGTTCTTTAACGGCAAAAAAGGCTTCAAAAGTAGTGATGGGGTGCTTAACAATGCAAATAATCTGCTTGCTAAAGCTATTTCAAAGCTGGAGGAAGAGTTTAAACAACTACTATTATCATATAGCAAACCTGTGGAGCCTGAGCGCCTTTTTGAGTGTCTTCCCAATTCATTGCGACCATCCACGGGATCATCTGGACATCCGGGAGATTCAAATGACAAAAATAATCATTCTGATCATCACAACAATAACTTAGAAAATGCTGTTTACACGCCGCCCACTCTCATACCACCCCGAGTTCTTCCATTGCTACACGACTTAGCTGAGCAGATGATTGAAGCTTCCCACAGACAACAATTACAGAAAATTTACAGGGATGCTCGGGCTCCTGTATTAGAAGAAAGTCTCAGAAAATTAGGAGTTGAGAGACTTAGCAAAGATGATGTTCAAAAGATGCAGTGGGAGGTTTTAGAAGCAAAAATTGGGAATTGGATTCATTTCATGCGCATTGCTGTCAAACTTCTGTTTGCTGGAGAACGTAAAGTTTGTGATCAAATATTTGAAGGCTTTAATTCTCTTAGTGATCAGTGCTTTGCGGAGGTAACTACAAGCAGTGTTTCTACACTCTTTAGTTTTGGGGAGGCAATTGCTAGAAGCAAGAGGTCCCCGGAAAAGTTATTTGTCCTTTTGGACATGTATGAGATAATGCGAGAGCTTCACACAGAGATCACGACAATTTTCAAGGGTAAAGCTTGCACGGAAATTAGAGAATCTGCGATGGGTCTGACTAAACAGCTGGCCCAGACAGCTCAAGACACGTTTGGTGATTTTGAGGACGCCGTTGAAAAGGATGCAACTAAGACGGCTGTGCTGGATGGGACAGTCCATCCTTTGACAAGCTATGTGATTAACTATGTGAAATTTCTATTTGACTATCAATCAACATTGAAGCAGCTTTTCCAAGAATTTGAACAAGGAGAGCAGACAACGTCACAGTTAGCTAATGTAACAATGAAGATTATGCAAGCTCTTCAATCTAATTTGGATGGAAAATCTAAGCAGTACAAAGATGTTGCATTGATTCATTTATTTCTTATGAACAACATCCACTATATTGTCAGATCTGTGCGTAGATCAGAGGCCAAGGATTTGTTAGGGGATGACTGGGTTCAGAGACACAGGAGGACTGTACAGCAGCATGCAAATCAGTATAAAAGGAATGCCTGGGGAAAGGTTTTGCAGTGCTTGTCAGTTCAAGGACTGACCTCATCTGGGGGCGGTAGCACAGCCAGTGGAGATGGAGGAAATAGTAGTGGAGTTTCAAGGGCACTAGTTAAAGACAGGTTTAAAACTTTCAATATGCAATTCGAGGAGCTTCATCAAAAGCAATCGCAGTGGACAGTTCCGGATTCCGAATTGAGAGAGTCCCTAAGACTTGCTGTTGCTGAAGTCTTATTGCCTGCCTATCGGTCTTTCCTTACACGTTTCGGACCGCTTGTTGATAGCGGAAAGAGTCCGCAGAAGTACATCCGGTACCAGCCGGAGGATCTTGAGAAGATGCTGGGGGAATTTTTTGAGGGGAAGGCGTCGACGGATCCAAAGCCGCGATAA 1953 43.11 MRVSAEMGSDFLRERAAMMRESLLKSQTITENVVSILGSFDHRLSALETAMRPTQIRTHSIRKAHENIDKTLKAAEGILGKFDISRQAEVKILKGPHEDLESYLEAIDQLRGNIQFFNGKKGFKSSDGVLNNANNLLAKAISKLEEEFKQLLLSYSKPVEPERLFECLPNSLRPSTGSSGHPGDSNDKNNHSDHHNNNLENAVYTPPTLIPPRVLPLLHDLAEQMIEASHRQQLQKIYRDARAPVLEESLRKLGVERLSKDDVQKMQWEVLEAKIGNWIHFMRIAVKLLFAGERKVCDQIFEGFNSLSDQCFAEVTTSSVSTLFSFGEAIARSKRSPEKLFVLLDMYEIMRELHTEITTIFKGKACTEIRESAMGLTKQLAQTAQDTFGDFEDAVEKDATKTAVLDGTVHPLTSYVINYVKFLFDYQSTLKQLFQEFEQGEQTTSQLANVTMKIMQALQSNLDGKSKQYKDVALIHLFLMNNIHYIVRSVRRSEAKDLLGDDWVQRHRRTVQQHANQYKRNAWGKVLQCLSVQGLTSSGGGSTASGDGGNSSGVSRALVKDRFKTFNMQFEELHQKQSQWTVPDSELRESLRLAVAEVLLPAYRSFLTRFGPLVDSGKSPQKYIRYQPEDLEKMLGEFFEGKASTDPKPR 650
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 24228268 24235419 + Bpe016633.1 Bpe04g01931 103740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g01931 650 MobiDBLite consensus disorder prediction 169 205 - -
Bpe04g01931 650 MobiDBLite consensus disorder prediction 171 185 - -
Bpe04g01931 650 Gene3D Exocyst complex component Exo70 77 649 - -
Bpe04g01931 650 PANTHER EXOCYST COMPLEX PROTEIN EXO70 36 645 IPR004140 GO:0000145|GO:0006887
Bpe04g01931 650 SUPERFAMILY Cullin repeat-like 78 640 IPR016159 -
Bpe04g01931 650 Coils Coil 130 150 - -
Bpe04g01931 650 PANTHER EXOCYST COMPLEX COMPONENT EXO70A1-LIKE 36 645 - -
Bpe04g01931 650 Pfam Exo70 exocyst complex subunit 277 636 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00708 Bpe-Chr2:4853642 Bpe04g01931 Bpe-Chr4:24228268 0 dispersed
Bpe04g01931 Bpe-Chr4:24228268 Bpe13g00204 Bpe-Chr13:10055728 1.73E-114 dispersed
Bpe04g01931 Bpe-Chr4:24228268 Bpe10g00709 Bpe-Chr10:13496707 3.38E-119 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g01931 K07195 - cit:102629699 1041.57