Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g01947 ATGGAGAAGCTGAGATGCTGCAATGGCTTCCTAGAAAACTCTAAACCTTACTTTGCTATGATCTCTTTGCAATTTGGATACGCTGGAATGAATATAATCACTAAAGTCTCTCTCAACAGAGGGATGAGTCATTATGTTCTTGTGGTCTATCGCCATGCTTTTGCTACTATTTCAATTGCTCCATTTGTTCTGTTCTTCGAAAGGAGGGGACAGCCGAAGATTACGTTTAAAGTTTTCATGCAGATCTTCACTCTTGCTCTACTCGGCTTGAGTTTATTGTGTTTTGATAGGCCTGTTATTGATCAGAACTTCTACTACGCGGGTTTGAAGTACACTTCGCCAACTTTCTCCTGTGCTTTAAGCAATATGTTACCTGCAATGACATTTGTCATGGCAGTGATTTTCAGGATGGAGAAGGTGGATGTAAAAAAGGTTCGATGCCAAGCGAAAATAATTGGAACTTTAGTGACAGTGGCTGGAGCCATGTTGATGACGTTGTACAAAGGAAATATAGTGGAGATGCCTTGGTCGAAGAATGTTCATCCGAGATATGCTTCTGAAACTAAGGAATCAAACAGCAAGGACTGGTTTAAAGGCTCCATTTTTGTCATCATTGCTACACTTGCCTGGGCTTGTCTCTTCGTTTTACAGAACCAAGCGTTGAAGACGTACAAGAATCATCAATTCTCTCTCACAGCGTTGGTGTGCTTCGTCGGGACTTTACAAGCTATTGCAGTCACTTTTGTGGTGGAACATAAACCCTCTGTTTGGAGCATTGGCTGGGACATGAACCTCCTTGCTGCCGCCTATGCTGGAATTGTTACGTCAAGTCTGTCATACTATGTTCAAGGCTTGGTAATGAGGAAAAGAGGTCCAGTTTTTGCAACTGCTTTCAGCCCTCTGATGATGATAATTGTCGCAATCATGGGTTCTTTTATTCTTGCAGAAAAGATCTATCTTGGAGGTGTTGTTGGAGCTTTTTTGATAGTGATTGGACTGTACTCAGTTCTGTGGGGAAAACACAAAGAAATAAACATAGAGAGCAAAGAGGAAGATGAGATTCCAGAGGCAATAAAGGTTTCTCATGCAAATGGAAACAGGATTTCTGTTCTGGAAGAGGAAGAAAATGAAGTTGAAATGGGAAAAAACAAAGAAGTTAATAAGCAATCTTCCATTGCTATTACCATTCCTCCCTGTCCAGAATCCCCCATGAAAGACAAAACCCTAATTTAA 1233 41.04 MEKLRCCNGFLENSKPYFAMISLQFGYAGMNIITKVSLNRGMSHYVLVVYRHAFATISIAPFVLFFERRGQPKITFKVFMQIFTLALLGLSLLCFDRPVIDQNFYYAGLKYTSPTFSCALSNMLPAMTFVMAVIFRMEKVDVKKVRCQAKIIGTLVTVAGAMLMTLYKGNIVEMPWSKNVHPRYASETKESNSKDWFKGSIFVIIATLAWACLFVLQNQALKTYKNHQFSLTALVCFVGTLQAIAVTFVVEHKPSVWSIGWDMNLLAAAYAGIVTSSLSYYVQGLVMRKRGPVFATAFSPLMMIIVAIMGSFILAEKIYLGGVVGAFLIVIGLYSVLWGKHKEINIESKEEDEIPEAIKVSHANGNRISVLEEEENEVEMGKNKEVNKQSSIAITIPPCPESPMKDKTLI 410
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 24336689 24338484 - Bpe016649.1 Bpe04g01947 103756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g01947 410 PANTHER WAT1-RELATED PROTEIN 10 378 IPR030184 GO:0016021|GO:0022857
Bpe04g01947 410 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 168 - -
Bpe04g01947 410 Pfam EamA-like transporter family 198 337 IPR000620 GO:0016020|GO:0016021
Bpe04g01947 410 Pfam EamA-like transporter family 16 165 IPR000620 GO:0016020|GO:0016021
Bpe04g01947 410 PANTHER WAT1-RELATED PROTEIN 10 378 - -
Bpe04g01947 410 SUPERFAMILY Multidrug resistance efflux transporter EmrE 255 342 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01371 Bpe-Chr4:20319330 Bpe04g01947 Bpe-Chr4:24336689 1.18E-176 dispersed
Bpe04g01947 Bpe-Chr4:24336689 Bpe15g01102 Bpe-Chr15:20171892 3.67E-96 dispersed
Bpe15g01004 Bpe-Chr15:19548795 Bpe04g01947 Bpe-Chr4:24336689 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g01947 - - dzi:111295021 602.438