Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bpe04g01964 | ATGGGTCTGTCTGCAGAAGCTCAGTTTCATGTATTGGCTGTAGATGACAGCCCCCTTGATCGGAAGTTGATCGAAAAACTCCTTAAAATCTATTCTTATCAAGTAACAACAGTAGATTCTGGCGTTAATGCCCTGGAATTTCTGGGTTTACAAGAAGATGACGAGAAGCGAGGAGAAAACGATCATACTGTTCTTCCTGAAACTCATCATCAAGATATTGGAGTAAATTTGATCATCACAGATTACTGTATGCCTGGAATGACCGGTTATGATCTCCTCAGAAAAATCAAGCAATCTAAATCTATGAAAGACACACCTGTAGTGATCATGTCCTCAGAAGATAATCCTTCAAGAATCAACAGATGCCTGGAAGAAGGAGCAGAAGAGTTTATACTAAAGCCAGTAAAAATGGGTGATGTGAGAAAGCTAAGACCCATTGTGCTGAGAGGAAAAGACAAGGAGAATGTAGATGGAAACAACACTGGACAACCTCAGATGCCTGATACAACAGACAAGCACATAAATGTATAG | 531 | 40.11 | MGLSAEAQFHVLAVDDSPLDRKLIEKLLKIYSYQVTTVDSGVNALEFLGLQEDDEKRGENDHTVLPETHHQDIGVNLIITDYCMPGMTGYDLLRKIKQSKSMKDTPVVIMSSEDNPSRINRCLEEGAEEFILKPVKMGDVRKLRPIVLRGKDKENVDGNNTGQPQMPDTTDKHINV | 176 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 24500677 | 24501787 | - | Bpe016664.1 | Bpe04g01964 | 103773 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bpe04g01964 | 176 | MobiDBLite | consensus disorder prediction | 151 | 176 | - | - | |
| Bpe04g01964 | 176 | MobiDBLite | consensus disorder prediction | 157 | 176 | - | - | |
| Bpe04g01964 | 176 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 3 | 159 | IPR045279 | GO:0009736 | |
| Bpe04g01964 | 176 | PANTHER | RESPONSE REGULATOR ARR8, PUTATIVE-RELATED | 3 | 159 | - | - | |
| Bpe04g01964 | 176 | ProSiteProfiles | Response regulatory domain profile. | 10 | 148 | IPR001789 | GO:0000160 | |
| Bpe04g01964 | 176 | CDD | REC_typeA_ARR | 11 | 143 | - | - | |
| Bpe04g01964 | 176 | Pfam | Response regulator receiver domain | 11 | 142 | IPR001789 | GO:0000160 | |
| Bpe04g01964 | 176 | SUPERFAMILY | CheY-like | 9 | 142 | IPR011006 | - | |
| Bpe04g01964 | 176 | SMART | REC_2 | 9 | 144 | IPR001789 | GO:0000160 | |
| Bpe04g01964 | 176 | Gene3D | - | 10 | 168 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bpe02g00640 | Bpe-Chr2:4187599 | Bpe04g01964 | Bpe-Chr4:24500677 | 2.37E-47 | dispersed | |
| Bpe03g01093 | Bpe-Chr3:30097327 | Bpe04g01964 | Bpe-Chr4:24500677 | 1.23E-37 | dispersed | |
| Bpe04g00591 | Bpe-Chr4:3762637 | Bpe04g01964 | Bpe-Chr4:24500677 | 1.57E-37 | dispersed | |
| Bpe04g01386 | Bpe-Chr4:20525238 | Bpe04g01964 | Bpe-Chr4:24500677 | 6.62E-64 | dispersed | |
| Bpe04g01964 | Bpe-Chr4:24500677 | Bpe13g00265 | Bpe-Chr13:10597931 | 1.46E-48 | dispersed | |
| Bpe15g00976 | Bpe-Chr15:19368717 | Bpe04g01964 | Bpe-Chr4:24500677 | 1.65E-64 | wgd |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 21396 | PF00072 | Response_reg | 2.90E-22 | CL0304 | Bpe | TR |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bpe04g01964 | K14492 | - | mnt:21406707 | 224.172 |