Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g01964 ATGGGTCTGTCTGCAGAAGCTCAGTTTCATGTATTGGCTGTAGATGACAGCCCCCTTGATCGGAAGTTGATCGAAAAACTCCTTAAAATCTATTCTTATCAAGTAACAACAGTAGATTCTGGCGTTAATGCCCTGGAATTTCTGGGTTTACAAGAAGATGACGAGAAGCGAGGAGAAAACGATCATACTGTTCTTCCTGAAACTCATCATCAAGATATTGGAGTAAATTTGATCATCACAGATTACTGTATGCCTGGAATGACCGGTTATGATCTCCTCAGAAAAATCAAGCAATCTAAATCTATGAAAGACACACCTGTAGTGATCATGTCCTCAGAAGATAATCCTTCAAGAATCAACAGATGCCTGGAAGAAGGAGCAGAAGAGTTTATACTAAAGCCAGTAAAAATGGGTGATGTGAGAAAGCTAAGACCCATTGTGCTGAGAGGAAAAGACAAGGAGAATGTAGATGGAAACAACACTGGACAACCTCAGATGCCTGATACAACAGACAAGCACATAAATGTATAG 531 40.11 MGLSAEAQFHVLAVDDSPLDRKLIEKLLKIYSYQVTTVDSGVNALEFLGLQEDDEKRGENDHTVLPETHHQDIGVNLIITDYCMPGMTGYDLLRKIKQSKSMKDTPVVIMSSEDNPSRINRCLEEGAEEFILKPVKMGDVRKLRPIVLRGKDKENVDGNNTGQPQMPDTTDKHINV 176
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
4 24500677 24501787 - Bpe016664.1 Bpe04g01964 103773
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g01964 176 MobiDBLite consensus disorder prediction 151 176 - -
Bpe04g01964 176 MobiDBLite consensus disorder prediction 157 176 - -
Bpe04g01964 176 PANTHER TWO-COMPONENT RESPONSE REGULATOR 3 159 IPR045279 GO:0009736
Bpe04g01964 176 PANTHER RESPONSE REGULATOR ARR8, PUTATIVE-RELATED 3 159 - -
Bpe04g01964 176 ProSiteProfiles Response regulatory domain profile. 10 148 IPR001789 GO:0000160
Bpe04g01964 176 CDD REC_typeA_ARR 11 143 - -
Bpe04g01964 176 Pfam Response regulator receiver domain 11 142 IPR001789 GO:0000160
Bpe04g01964 176 SUPERFAMILY CheY-like 9 142 IPR011006 -
Bpe04g01964 176 SMART REC_2 9 144 IPR001789 GO:0000160
Bpe04g01964 176 Gene3D - 10 168 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00640 Bpe-Chr2:4187599 Bpe04g01964 Bpe-Chr4:24500677 2.37E-47 dispersed
Bpe03g01093 Bpe-Chr3:30097327 Bpe04g01964 Bpe-Chr4:24500677 1.23E-37 dispersed
Bpe04g00591 Bpe-Chr4:3762637 Bpe04g01964 Bpe-Chr4:24500677 1.57E-37 dispersed
Bpe04g01386 Bpe-Chr4:20525238 Bpe04g01964 Bpe-Chr4:24500677 6.62E-64 dispersed
Bpe04g01964 Bpe-Chr4:24500677 Bpe13g00265 Bpe-Chr13:10597931 1.46E-48 dispersed
Bpe15g00976 Bpe-Chr15:19368717 Bpe04g01964 Bpe-Chr4:24500677 1.65E-64 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21396 PF00072 Response_reg 2.90E-22 CL0304 Bpe TR
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g01964 K14492 - mnt:21406707 224.172