Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe05g00018 ATGGGCAGCATACGAGATTCCATGTTACAAACAGCAGATGAGGTGACACCATTGAAGAAGAAGCTAGATGAGTTTGGTACTTTTTTAGCCAAGGTCATTGCTGGAATATGTCTACTGGTATGGATAGTAAACATTGGTCACTTTCATGACCCTTCTCATGGAGGGTTCATACGTGGTGCAATTCATTACTTTAAGATTGCAGTTGCCCTTGCAGTTGCAGCAATACCTGAAGGACTCCCTGCTGTTGTTACAACGTGTTTGGCTCTTGGAACCAAACGAATGGCTCGGATGAATGCAATTGTAAGATCTTTGCCATCTGTGGAGACATTAGGCTGTACTACTGTAATATGCAGTGACAAAACTGGAACTTTGACTACCAATATGATATCTGTTTCCAAGGTGGAATTTCCAGCTCAGTTATCTTGTCTTCTACATATGGCTATGTGCTCAGCCCTGTGCAATGAGTCTGTATTGCAATATAATCCTGACAAGGGTACCTATGAAAAGATTGGCGAATCTACTGAAGTGGCCCTACGTGTTCTGGCAGAGAAGGTGGGTCTTCCTGGTTTTGACTCAATGCCTTCATCTTTGAATATGCTAAGCAAACATGAACGAGCTTCCTACTGCAACCACCATTGGGAAAGTCAATTCAAAAAGATTTCAATATTGGACTTTACTCGTGATCGTAAAATGATGAGTGTTCTATGTAGCAGAAATCAGCTACAGATATTATTTGCAAAAGGTGCTCCTGAGAGTATCATTTCTAGATGTTCTTATATACTTTGCAATGAAGATGGTTCCATTTCACCTCTAACTTCCAATATTCAAGCTGAGCTAGAGTCAAAGTTTCAAAGTTTTGCAGGAAAAGAAACTCTAAGATGCCTGGCTTTGGCTTTGAAGTGGATGCCTACGGATCAACAGAGTTTGTCTATTGATGACGAGAAAGAACTTACATTCATTGGGTTGGTTGGAATGCTTGATCCACCGAGAGAGGAAGTCAGAAGTGCTATGCTTTCATGCATGACTGCTGGTATACGTGTTATAGTGGTCACTGGTGATAACAAGTCAACAGCTGAATCCATCTGCCGCCAGATTGGTGGTCCATTTGATCATATCAATCTTCCAGGACATTCTTATACTGCTTCTGAGTTCGAAGAACTACCTTCATTGCAGCAAACTGTGGCAGTGCAACATATGACCCTATTCAGCAGAGTTGAACCTTCTCATAAGAGGATGCTGGTTGAGGCTTTACAGCATCAAAATGAAGTGGTTGCAATGACCGGTGATGGCGTCAATGATGCTCCTGCACTAAAAAAAGCTGACATAGGGATCGCCATGGGTTCAGGAACAGCAGTTGCCAAGAGTGCTTCAGATATGGTTTTGGCAGATGACAATTTTGCTACGATTGTCGCGGCCGTTGCTGAGGGACGGGCTATATATTATAACACAAAGCAGTTTATCAGATACATGATCTCATCGAACATTGGTGAAGTGGTTTGTATATTTGTGGCAGCTGTACTTGGAATTCCAGAAACCCTTGCTCCTGTTCAGCTTCTCTGGGTTAATTTGGTCACTGATGGATTACCTGCCACTGCAATTGGATTTAACAAGCAAGACTCTGATGTAATGAAGGTTAAACCACGTAAGGTGAATGAAGCTGTTGTTACTGGGTGGCTGTTCTTTCGTTACTTGGTTATCGGAGCCTATGTCGGCTTTGCCACTGTTGCCGGTTTCATTTGGTGGTTTGTTTACTCTGATAGTGGTCCTCAACTACCATATAGTGAATTGATGAATTTTGACAGTTGTTCAGCAAGGGAGACGAGTTACCCATGCAGTGTATTCCATGATAGGCGTCCATCAACTGTTTCAATGACTGTCCTTGTTGTTGTTGAAATGTTTAATGCTTTGAATAATTTGAGTGAAAACCAATCTATTATTGTCATCCCTCCCTGGAGTAATTTATGGCTTGTAGCTTCAATTGTGCTTACAATGATTCTTCACGTACTTATTTTATATGTGCAACCGCTTTCTGTTCTTTTCTCTGTAACCCCACTATCTTGGACTGAGTGGACTGTTGTCTTGTATCTTTCATTTCCTGTAAGTTTTGTTTATTCGACTTACTATTTTTTTATTTTTTGCTCTAAAGGGAAATTAAGATTCAATTTCAGATTCAAAAGGCACGACTTACTTCCAAAGAAAGAACTTCACGACAAGTAA 2217 41.05 MGSIRDSMLQTADEVTPLKKKLDEFGTFLAKVIAGICLLVWIVNIGHFHDPSHGGFIRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARMNAIVRSLPSVETLGCTTVICSDKTGTLTTNMISVSKVEFPAQLSCLLHMAMCSALCNESVLQYNPDKGTYEKIGESTEVALRVLAEKVGLPGFDSMPSSLNMLSKHERASYCNHHWESQFKKISILDFTRDRKMMSVLCSRNQLQILFAKGAPESIISRCSYILCNEDGSISPLTSNIQAELESKFQSFAGKETLRCLALALKWMPTDQQSLSIDDEKELTFIGLVGMLDPPREEVRSAMLSCMTAGIRVIVVTGDNKSTAESICRQIGGPFDHINLPGHSYTASEFEELPSLQQTVAVQHMTLFSRVEPSHKRMLVEALQHQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEGRAIYYNTKQFIRYMISSNIGEVVCIFVAAVLGIPETLAPVQLLWVNLVTDGLPATAIGFNKQDSDVMKVKPRKVNEAVVTGWLFFRYLVIGAYVGFATVAGFIWWFVYSDSGPQLPYSELMNFDSCSARETSYPCSVFHDRRPSTVSMTVLVVVEMFNALNNLSENQSIIVIPPWSNLWLVASIVLTMILHVLILYVQPLSVLFSVTPLSWTEWTVVLYLSFPVSFVYSTYYFFIFCSKGKLRFNFRFKRHDLLPKKELHDK 738
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 415699 440463 - Bpe017405.3 Bpe05g00018 103795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe05g00018 738 ProSitePatterns E1-E2 ATPases phosphorylation site. 119 125 IPR018303 -
Bpe05g00018 738 Pfam haloacid dehalogenase-like hydrolase 413 467 - -
Bpe05g00018 738 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 124 325 IPR023299 GO:0000166
Bpe05g00018 738 PANTHER SARCOPLASMIC/ENDOPLASMIC RETICULUM CALCIUM ATPASE 3 1 145 - -
Bpe05g00018 738 SFLD Haloacid Dehalogenase 98 479 - -
Bpe05g00018 738 PANTHER CALCIUM-TRANSPORTING ATPASE 1 145 - -
Bpe05g00018 738 SUPERFAMILY Calcium ATPase, transmembrane domain M 10 711 IPR023298 -
Bpe05g00018 738 PANTHER CALCIUM-TRANSPORTING ATPASE 138 703 - -
Bpe05g00018 738 Gene3D - 1 146 - -
Bpe05g00018 738 PANTHER SARCOPLASMIC/ENDOPLASMIC RETICULUM CALCIUM ATPASE 3 138 703 - -
Bpe05g00018 738 SFLD p-type atpase 98 479 IPR044492 -
Bpe05g00018 738 Pfam E1-E2 ATPase 2 96 - -
Bpe05g00018 738 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 397 515 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bpe05g00018 738 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 8 136 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bpe05g00018 738 PRINTS P-type cation-transporting ATPase superfamily signature 343 353 - -
Bpe05g00018 738 PRINTS P-type cation-transporting ATPase superfamily signature 117 131 - -
Bpe05g00018 738 PRINTS P-type cation-transporting ATPase superfamily signature 427 446 - -
Bpe05g00018 738 PRINTS P-type cation-transporting ATPase superfamily signature 450 462 - -
Bpe05g00018 738 PRINTS P-type cation-transporting ATPase superfamily signature 321 332 - -
Bpe05g00018 738 Gene3D - 435 712 - -
Bpe05g00018 738 Pfam Cation transporting ATPase, C-terminus 511 704 IPR006068 -
Bpe05g00018 738 PRINTS H+-transporting ATPase (proton pump) signature 427 443 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bpe05g00018 738 PRINTS H+-transporting ATPase (proton pump) signature 399 415 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bpe05g00018 738 PRINTS H+-transporting ATPase (proton pump) signature 458 483 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bpe05g00018 738 SUPERFAMILY HAD-like 115 530 IPR036412 -
Bpe05g00018 738 Pfam Cation transport ATPase (P-type) 151 260 - -
Bpe05g00018 738 TIGRFAM ATPase-IIA1_Ca: calcium-translocating P-type ATPase, SERCA-type 1 582 IPR005782 GO:0005388|GO:0006816|GO:0016021
Bpe05g00018 738 Gene3D - 147 350 IPR023299 GO:0000166
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe05g00018 Bpe-Chr5:415699 Bpe08g00127 Bpe-Chr8:664440 0 dispersed
Bpe04g00158 Bpe-Chr4:1026710 Bpe05g00018 Bpe-Chr5:415699 5.37E-68 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe05g00018 K05853 - gmx:100783509 1257.28