Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe05g00025 | ATGAGGGAGATGATATTCAGAATAGCAGTAATGCAGCCAATAGAGATAGATCCAGAGGCTGTAAAGGCGCCCAAGAGAAGGAACGTGAAGATATCGAAGGACCCTCAAAGCGTGGCTGCAAGGCACAGGAGAGAGAAAATAAGTGAGAGAATAAGAACACTCCAGAGACTGGTTCCAGGAGGGACAAAGATGGATACAGCTTCGATGTTGGACGAGGCAGTTCACTACGTCAAGTTTTTGAAGACGCAAGTCCAGTCCTTGGAAGGGGCGGTAGGCAGTAGACCTAATGGAATAGGGTACCCTGTTGGGATAGTGTCTGAGACTACCTCTACGCTGTATCAATTGTCTCCAAATTCTAATCCTAGCTAG | 369 | 47.15 | MREMIFRIAVMQPIEIDPEAVKAPKRRNVKISKDPQSVAARHRREKISERIRTLQRLVPGGTKMDTASMLDEAVHYVKFLKTQVQSLEGAVGSRPNGIGYPVGIVSETTSTLYQLSPNSNPS | 122 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 524999 | 525367 | - | Bpe017412.1 | Bpe05g00025 | 103802 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe05g00025 | 122 | Pfam | Helix-loop-helix DNA-binding domain | 40 | 80 | IPR011598 | GO:0046983 | |
Bpe05g00025 | 122 | SMART | finulus | 37 | 86 | IPR011598 | GO:0046983 | |
Bpe05g00025 | 122 | Gene3D | - | 29 | 94 | IPR036638 | GO:0046983 | |
Bpe05g00025 | 122 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 31 | 80 | IPR011598 | GO:0046983 | |
Bpe05g00025 | 122 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 35 | 90 | IPR036638 | GO:0046983 | |
Bpe05g00025 | 122 | PANTHER | BASIC HELIX-LOOP-HELIX (BHLH)-LIKE PROTEIN | 1 | 110 | - | - | |
Bpe05g00025 | 122 | CDD | bHLH_AtIND_like | 32 | 88 | - | - | |
Bpe05g00025 | 122 | PANTHER | TRANSCRIPTION FACTOR HEC3-RELATED | 1 | 110 | IPR045843 | GO:0003700|GO:0006355 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bpe02g00430 | Bpe05g00025 | CCT | |
Bpe04g00178 | Bpe05g00025 | CCT | |
Bpe02g00430 | Bpe05g00025 | ECH | |
Bpe04g00178 | Bpe05g00025 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe04g00178 | Bpe-Chr4:1152051 | Bpe05g00025 | Bpe-Chr5:524999 | 2.36E-60 | dispersed | |
Bpe05g00025 | Bpe-Chr5:524999 | Bpe06g00258 | Bpe-Chr6:13313700 | 5.71E-41 | dispersed | |
Bpe07g00590 | Bpe-Chr7:12450725 | Bpe05g00025 | Bpe-Chr5:524999 | 3.53E-12 | dispersed | |
Bpe02g00430 | Bpe-Chr2:2819866 | Bpe05g00025 | Bpe-Chr5:524999 | 1.81E-58 | wgd | |
Bpe02g01776 | Bpe-Chr2:20088959 | Bpe05g00025 | Bpe-Chr5:524999 | 3.29E-19 | wgd | |
Bpe02g00449 | Bpe-Chr2:2940436 | Bpe05g00025 | Bpe-Chr5:524999 | 1.45E-17 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
21399 | PF00010 | HLH | 2.10E-07 | No_clan | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe05g00025 | - | - | dzi:111314849 | 182.956 |