Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe05g00025 ATGAGGGAGATGATATTCAGAATAGCAGTAATGCAGCCAATAGAGATAGATCCAGAGGCTGTAAAGGCGCCCAAGAGAAGGAACGTGAAGATATCGAAGGACCCTCAAAGCGTGGCTGCAAGGCACAGGAGAGAGAAAATAAGTGAGAGAATAAGAACACTCCAGAGACTGGTTCCAGGAGGGACAAAGATGGATACAGCTTCGATGTTGGACGAGGCAGTTCACTACGTCAAGTTTTTGAAGACGCAAGTCCAGTCCTTGGAAGGGGCGGTAGGCAGTAGACCTAATGGAATAGGGTACCCTGTTGGGATAGTGTCTGAGACTACCTCTACGCTGTATCAATTGTCTCCAAATTCTAATCCTAGCTAG 369 47.15 MREMIFRIAVMQPIEIDPEAVKAPKRRNVKISKDPQSVAARHRREKISERIRTLQRLVPGGTKMDTASMLDEAVHYVKFLKTQVQSLEGAVGSRPNGIGYPVGIVSETTSTLYQLSPNSNPS 122
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 524999 525367 - Bpe017412.1 Bpe05g00025 103802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe05g00025 122 Pfam Helix-loop-helix DNA-binding domain 40 80 IPR011598 GO:0046983
Bpe05g00025 122 SMART finulus 37 86 IPR011598 GO:0046983
Bpe05g00025 122 Gene3D - 29 94 IPR036638 GO:0046983
Bpe05g00025 122 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 31 80 IPR011598 GO:0046983
Bpe05g00025 122 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 35 90 IPR036638 GO:0046983
Bpe05g00025 122 PANTHER BASIC HELIX-LOOP-HELIX (BHLH)-LIKE PROTEIN 1 110 - -
Bpe05g00025 122 CDD bHLH_AtIND_like 32 88 - -
Bpe05g00025 122 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 1 110 IPR045843 GO:0003700|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g00430 Bpe05g00025 CCT
Bpe04g00178 Bpe05g00025 CCT
Bpe02g00430 Bpe05g00025 ECH
Bpe04g00178 Bpe05g00025 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00178 Bpe-Chr4:1152051 Bpe05g00025 Bpe-Chr5:524999 2.36E-60 dispersed
Bpe05g00025 Bpe-Chr5:524999 Bpe06g00258 Bpe-Chr6:13313700 5.71E-41 dispersed
Bpe07g00590 Bpe-Chr7:12450725 Bpe05g00025 Bpe-Chr5:524999 3.53E-12 dispersed
Bpe02g00430 Bpe-Chr2:2819866 Bpe05g00025 Bpe-Chr5:524999 1.81E-58 wgd
Bpe02g01776 Bpe-Chr2:20088959 Bpe05g00025 Bpe-Chr5:524999 3.29E-19 wgd
Bpe02g00449 Bpe-Chr2:2940436 Bpe05g00025 Bpe-Chr5:524999 1.45E-17 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21399 PF00010 HLH 2.10E-07 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe05g00025 - - dzi:111314849 182.956