Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe05g00031 ATGGATTCTGAGTTTTGCTCCGCCACGTCTGGCTCCGAGAAGAGGAAGCAGCGGGGGATCCGCCCGGAGAAGCCTTACCGAGGAATCAGGATGAGGAAGTGGGGAAAGTGGGTGGCGGAGATTAGAGAACCCAACAAACGCTCCAGAATTTGGCTCGGCTCTTATACTACTCCTGTCGCCGCCGCTCGTGCCTATGACACCGCCGTCTTCTATCTCCGGGGACCCTCCGCTCGCCTGAACTTTCCGGAGTTGATCTTCAAAGAAGATCAGCTTAACGACATGTCCGCCGCTTCTATACGCAAAAAGGCCACGGAGGTCGGAGCGAGAGTCGACGCAATCGAAGCTTCTCTTCACGCTTCCAGGACGAACTCTTCTCAGCTCTCTGAAAAACCCGATTTAAACGAGTTTCCAGACCCAGAAAACTCCGACGAAGAAGACCATCTTCTCTGA 450 54.22 MDSEFCSATSGSEKRKQRGIRPEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLNFPELIFKEDQLNDMSAASIRKKATEVGARVDAIEASLHASRTNSSQLSEKPDLNEFPDPENSDEEDHLL 149
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 611547 611996 - Bpe017417.1 Bpe05g00031 103808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe05g00031 149 MobiDBLite consensus disorder prediction 117 131 - -
Bpe05g00031 149 CDD AP2 26 84 IPR001471 GO:0003700|GO:0006355
Bpe05g00031 149 ProSiteProfiles AP2/ERF domain profile. 25 82 IPR001471 GO:0003700|GO:0006355
Bpe05g00031 149 MobiDBLite consensus disorder prediction 9 24 - -
Bpe05g00031 149 Pfam AP2 domain 26 74 IPR001471 GO:0003700|GO:0006355
Bpe05g00031 149 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 9 143 - -
Bpe05g00031 149 SUPERFAMILY DNA-binding domain 25 83 IPR016177 GO:0003677
Bpe05g00031 149 MobiDBLite consensus disorder prediction 117 149 - -
Bpe05g00031 149 MobiDBLite consensus disorder prediction 1 24 - -
Bpe05g00031 149 Gene3D AP2/ERF domain 25 83 IPR036955 GO:0003700|GO:0006355
Bpe05g00031 149 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 9 143 - -
Bpe05g00031 149 SMART rav1_2 25 88 IPR001471 GO:0003700|GO:0006355
Bpe05g00031 149 PRINTS Ethylene responsive element binding protein signature 64 84 IPR001471 GO:0003700|GO:0006355
Bpe05g00031 149 PRINTS Ethylene responsive element binding protein signature 26 37 IPR001471 GO:0003700|GO:0006355
Bpe05g00031 149 MobiDBLite consensus disorder prediction 133 149 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00175 Bpe-Chr4:1131799 Bpe05g00031 Bpe-Chr5:611547 6.58E-74 dispersed
Bpe05g00031 Bpe-Chr5:611547 Bpe13g00099 Bpe-Chr13:6315264 9.64E-58 dispersed
Bpe02g00436 Bpe-Chr2:2846045 Bpe05g00031 Bpe-Chr5:611547 3.65E-75 wgd
Bpe02g01799 Bpe-Chr2:20246667 Bpe05g00031 Bpe-Chr5:611547 3.51E-97 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21402 PF00847 AP2 2.20E-11 CL0081 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe05g00031 K09286 - csv:101219005 233.032