Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe05g00032 ATGAAATCTCTCTCCAATTTCATTGAAATCCCATCCAAATCCTCTCCTCCTTCCTTCACAATCCCTTTTTTGACTCCTCAAACCAAGCTCTGTCCCTCTCAGTTTCCCTACAGTAGTCGGATCATCAATTTCCGTACCGGAGTTGCCATTATCTCAAAACCCTCTGCGCTATCCATTGCCACTGTCGCGAAAAGGGTAGGTCGAATCAGGGCTGTCACCGCCGAAAATGGGTCGCCGGCTGCGTTGTCTGAGATCGACATGGTGGAAAACAAACAAGGGATTTTCACACCCAAGCCGAATAAGGTCGTTGTCCTCTGGGACCTCGACAACAAACCGCCTCGTGGACCGCCGTACGAGGCGGCGATAGCTCTCCGACGAGTAGCAAATCGTTTTGGTGACGTGATCGACATCTCTGCCTACGCTAACCGCCACGCCTTCGTCCATTTACCCCAGTGGGTGCTCGAAGAACGGCGAGAACGGAAGCGATTAGACATTCTAGAGCGAAAGGGTTTGTCTATGCCTTCCAATTTGTCCGTATGTGGCGTTTGTGGCCGGAAGTGCAAAACCAATCTCGATCTGAAGAAGCATTTCAAACAACTCCACCAGCGAGAGCGGGAGAAGAAACTGAGCAGGATGAGATCTTTGAAAGGCAAAAAGCGTCAGCGATATAAAGAGAAACACATATCTGGAAATGAGAAGTACATTGCGGCTGCGAGGTCATTAATAACTCCGAAGGTGGGATATGGGTTGGCTTCTGAATTGCGACGAGCTGGGGTTTTTGTGAAGACGGTAGAGGACAAACCTCAGGCGGCGGATTGGGCGCTGAAGAGGCAAATGCAGCATTCCATGAGCAGAGGCATTGACTGGCTGTTTCTGGTCTCAGACGATTCTGACTTTTCGGAGATGTTGAGGAGGGCCAGGGACGCCAATTTGAGGACAGTGGTGGTCGGCGATCGGGACAGAGCTTTGGGGAGACACGCCGATTTGTGGGTACCTTGGACTGTCGTCGAAAGTGGGGAAATTTCAGAGGAAGATTTGGAGCTCAAAAGCCGCCGGAGAAGTGAAGAATATGACGAAATCGATGAAGTGCAGACCGATTATGGATTGGATAGCATCGTGGATGAGCTTGTCAGTGTAAGAACGGAGTTAAACGGGTTGAGAATTTCTGCATTTTCAGAAGGGGAAGAGGAAGATGACTGTTTGTGGAGTTACAGTGAGGACGAGGAAGAAGACGATGACTACTACTGA 1248 49.92 MKSLSNFIEIPSKSSPPSFTIPFLTPQTKLCPSQFPYSSRIINFRTGVAIISKPSALSIATVAKRVGRIRAVTAENGSPAALSEIDMVENKQGIFTPKPNKVVVLWDLDNKPPRGPPYEAAIALRRVANRFGDVIDISAYANRHAFVHLPQWVLEERRERKRLDILERKGLSMPSNLSVCGVCGRKCKTNLDLKKHFKQLHQREREKKLSRMRSLKGKKRQRYKEKHISGNEKYIAAARSLITPKVGYGLASELRRAGVFVKTVEDKPQAADWALKRQMQHSMSRGIDWLFLVSDDSDFSEMLRRARDANLRTVVVGDRDRALGRHADLWVPWTVVESGEISEEDLELKSRRRSEEYDEIDEVQTDYGLDSIVDELVSVRTELNGLRISAFSEGEEEDDCLWSYSEDEEEDDDYY 415
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 615113 616360 - Bpe017418.1 Bpe05g00032 103809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe05g00032 415 ProSiteProfiles Zinc finger C2H2 type domain profile. 178 206 IPR013087 -
Bpe05g00032 415 Gene3D - 175 335 - -
Bpe05g00032 415 MobiDBLite consensus disorder prediction 395 415 - -
Bpe05g00032 415 PANTHER - 52 395 - -
Bpe05g00032 415 CDD PIN_LabA-like 188 318 - -
Bpe05g00032 415 ProSitePatterns Zinc finger C2H2 type domain signature. 180 201 IPR013087 -
Bpe05g00032 415 PANTHER OS06G0166200 PROTEIN 52 395 - -
Bpe05g00032 415 MobiDBLite consensus disorder prediction 393 415 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe05g00032 Bpe-Chr5:615113 Bpe05g00598 Bpe-Chr5:20009141 2.56E-54 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21403 None None None None Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe05g00032 - - csv:101206044 523.857