Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bpe05g00036 | ATGACGGGGCAAGATAATTGCACGCGTCTCACGCGGGCGGCGAAGAAGAGAGCTGCGGCTGACGAGAATGTCGGGAGTAGGAAAAGAGTGGTTCTGGGAGAGATTCAGAACCTGTCCAACGTTGTAGTTTCGGGCAACCCAATTCCTCAAAAGCAGAAATCTAAGTCGAAGACGAAGGTAAACATGCCACTGACAATGCCGTCTACCACAAAGAAGCCGACAACTACGTTGGTGAGAAGTGACAGTCCAGGATTGGAGAATACCCAAATTTGCCAAGCTTATGTCTTTGACATTTACGGGTACCTTCACAAGTTGGAGGAGAATCCAAAGAGAAGACCACTGCCTGATTATATTTCAAAGGTTCAGAAGGATATCAATGCTAATATGAGAGGAATTTTAGTGGATTGGTTAATTGAAGTTTCAGAGGAATACAAGCTCGTTTCGGACACTCTGTACCTCTCCATTTCCTACATTGATAGATTCCTATCTGTGAGCGAACTCAACAGGCAAAAACTTCAGTTGCTCGGTGTTTCTGCAATGCTGGTTGCCTCAAAGTATGAAGAGATCACTCCACCCCACGTGGAAGACTTTTGCTACATCACAGATAATACCTACACCAAGGAAGAGGTGGTAAAGATGGAGGCTGGTTTGCTCAAGGCTCTAAACTTTGAATTGGGAAATCCTACAATCAAGACATTTCTAAGGCATGATAATCCCTTAATTTTGTATCTTATTCTTTTGTGCTTCCCACAGAATCTTAATTTGGAGTTAGAATTTCTAGCCTACTACCTAGCGGAGCTAAGTCTTCTCGAATATAATTGTGTCAAATTTATGCCCTCGCTGGTTGCTGCATCGGCTATTTTTCTCGCAAGATTTATCATTCGGCCAAAGACCAATCCTTGGAGTTTAAGTCTGAAAAAGTGTTCTGGATACAACCCCGTTGATCTAAAGGACTGTGTGCTTCTTATACACGACTTGTATCTCGGCCGAAGAGGAACTTCTTTGGTGGCGGCGAGAGAGAAATACAAGCAGCATAAGTTCAAGTGTGTGGCAATTATGGCTTCTCCTCCAGAGGTTCCAGTCGCATATTTTGGAGACTGA | 1101 | 43.78 | MTGQDNCTRLTRAAKKRAAADENVGSRKRVVLGEIQNLSNVVVSGNPIPQKQKSKSKTKVNMPLTMPSTTKKPTTTLVRSDSPGLENTQICQAYVFDIYGYLHKLEENPKRRPLPDYISKVQKDINANMRGILVDWLIEVSEEYKLVSDTLYLSISYIDRFLSVSELNRQKLQLLGVSAMLVASKYEEITPPHVEDFCYITDNTYTKEEVVKMEAGLLKALNFELGNPTIKTFLRHDNPLILYLILLCFPQNLNLELEFLAYYLAELSLLEYNCVKFMPSLVAASAIFLARFIIRPKTNPWSLSLKKCSGYNPVDLKDCVLLIHDLYLGRRGTSLVAAREKYKQHKFKCVAIMASPPEVPVAYFGD | 366 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 702446 | 704351 | - | Bpe017423.2 | Bpe05g00036 | 103813 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bpe05g00036 | 366 | Pfam | Cyclin, N-terminal domain | 97 | 225 | IPR006671 | - | |
| Bpe05g00036 | 366 | Pfam | Cyclin, C-terminal domain | 228 | 355 | IPR004367 | - | |
| Bpe05g00036 | 366 | CDD | CYCLIN | 240 | 324 | IPR013763 | - | |
| Bpe05g00036 | 366 | SUPERFAMILY | Cyclin-like | 242 | 357 | IPR036915 | - | |
| Bpe05g00036 | 366 | ProSitePatterns | Cyclins signature. | 130 | 161 | IPR006671 | - | |
| Bpe05g00036 | 366 | PANTHER | CYCLIN-A3-1-RELATED | 21 | 364 | - | - | |
| Bpe05g00036 | 366 | SMART | Cyclin_C_2 | 228 | 356 | IPR004367 | - | |
| Bpe05g00036 | 366 | MobiDBLite | consensus disorder prediction | 46 | 81 | - | - | |
| Bpe05g00036 | 366 | PIRSF | Cyclin_A_B_D_E | 5 | 362 | IPR039361 | - | |
| Bpe05g00036 | 366 | PANTHER | CYCLINS | 21 | 364 | IPR039361 | - | |
| Bpe05g00036 | 366 | CDD | CYCLIN | 129 | 218 | IPR013763 | - | |
| Bpe05g00036 | 366 | SUPERFAMILY | Cyclin-like | 86 | 225 | IPR036915 | - | |
| Bpe05g00036 | 366 | Gene3D | - | 113 | 226 | - | - | |
| Bpe05g00036 | 366 | Gene3D | - | 97 | 351 | - | - | |
| Bpe05g00036 | 366 | SMART | cyclin_7 | 135 | 219 | IPR013763 | - | |
| Bpe05g00036 | 366 | SMART | cyclin_7 | 242 | 325 | IPR013763 | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Bpe04g00165 | Bpe05g00036 | CCT | |
| Bpe02g00444 | Bpe05g00036 | CCT | |
| Bpe04g00165 | Bpe05g00036 | ECH | |
| Bpe02g00444 | Bpe05g00036 | ECH |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bpe04g00165 | Bpe-Chr4:1081293 | Bpe05g00036 | Bpe-Chr5:702446 | 8.24E-18 | dispersed | |
| Bpe05g00036 | Bpe-Chr5:702446 | Bpe14g00392 | Bpe-Chr14:3677387 | 4.39E-85 | dispersed | |
| Bpe02g00444 | Bpe-Chr2:2906099 | Bpe05g00036 | Bpe-Chr5:702446 | 1.43E-144 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bpe05g00036 | K06627 | - | pop:7472680 | 439.113 |