Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe05g00043 ATGAGCTGCAATGGCTGCAGAGTACTGAGAAAAGGGTGCGGCGAGACGTGTGTACTGAGATCGTGCCTGCTCTGGATCGACTCGCCGGAAGCCCAAGGCAACGCCACCTTGTTTCTCGCTAAGTTCTTCGGCCGGAGCGACCTATTGTCCTTCATCTCCGCCGTCCCCAATCATCAAAGACCTGCTTTGTTTAAGTCGCTATTATTCGAAGCGTGTGGAAGAACGGTGAATCCAGTGAACGGAGCGGTGGGGCTGTTAACGACAGGAAACTGGCATGTTTGCCAGGCGGCAGTGGAAACGGTGCTCTCTGGCGGCGTTCCCCGGCGAAGACAGGGGCCTGCAGCCGGACATCAGACCCCGAACTTGGAAGATTCTCTACTCACATCTCATACGGGCACATGCACGGAGCTAATCCCATCTTCCCTCTTCTACCCACCGTCGTCGTCCGTTGTCAAAGCAAGGGAATATCAACCATCCGATTTCGCTAATCTCTCTCAAACAAAACTCACCGGGAAATTAACCGGAAGCAGCAGCCATGGGGGCTTTCAAGATCGGAAACTGCTAAACTTATTTGTCTGA 579 53.54 MSCNGCRVLRKGCGETCVLRSCLLWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPNHQRPALFKSLLFEACGRTVNPVNGAVGLLTTGNWHVCQAAVETVLSGGVPRRRQGPAAGHQTPNLEDSLLTSHTGTCTELIPSSLFYPPSSSVVKAREYQPSDFANLSQTKLTGKLTGSSSHGGFQDRKLLNLFV 192
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 766859 767526 - Bpe017430.1 Bpe05g00043 103820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe05g00043 192 MobiDBLite consensus disorder prediction 105 124 - -
Bpe05g00043 192 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Bpe05g00043 192 Pfam Lateral organ boundaries (LOB) domain 2 101 IPR004883 -
Bpe05g00043 192 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 161 - -
Bpe05g00043 192 PANTHER LOB DOMAIN-CONTAINING PROTEIN 39-LIKE 1 161 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g01778 Bpe05g00043 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01779 Bpe-Chr2:20108402 Bpe05g00043 Bpe-Chr5:766859 4.22E-97 dispersed
Bpe05g00043 Bpe-Chr5:766859 Bpe14g00112 Bpe-Chr14:1585846 1.20E-47 dispersed
Bpe13g00123 Bpe-Chr13:7812815 Bpe05g00043 Bpe-Chr5:766859 4.48E-58 transposed
Bpe02g01778 Bpe-Chr2:20105653 Bpe05g00043 Bpe-Chr5:766859 1.76E-98 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21404 PF03195 LOB 1.80E-24 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe05g00043 - - csv:101208953 222.631