Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe05g00043 | ATGAGCTGCAATGGCTGCAGAGTACTGAGAAAAGGGTGCGGCGAGACGTGTGTACTGAGATCGTGCCTGCTCTGGATCGACTCGCCGGAAGCCCAAGGCAACGCCACCTTGTTTCTCGCTAAGTTCTTCGGCCGGAGCGACCTATTGTCCTTCATCTCCGCCGTCCCCAATCATCAAAGACCTGCTTTGTTTAAGTCGCTATTATTCGAAGCGTGTGGAAGAACGGTGAATCCAGTGAACGGAGCGGTGGGGCTGTTAACGACAGGAAACTGGCATGTTTGCCAGGCGGCAGTGGAAACGGTGCTCTCTGGCGGCGTTCCCCGGCGAAGACAGGGGCCTGCAGCCGGACATCAGACCCCGAACTTGGAAGATTCTCTACTCACATCTCATACGGGCACATGCACGGAGCTAATCCCATCTTCCCTCTTCTACCCACCGTCGTCGTCCGTTGTCAAAGCAAGGGAATATCAACCATCCGATTTCGCTAATCTCTCTCAAACAAAACTCACCGGGAAATTAACCGGAAGCAGCAGCCATGGGGGCTTTCAAGATCGGAAACTGCTAAACTTATTTGTCTGA | 579 | 53.54 | MSCNGCRVLRKGCGETCVLRSCLLWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPNHQRPALFKSLLFEACGRTVNPVNGAVGLLTTGNWHVCQAAVETVLSGGVPRRRQGPAAGHQTPNLEDSLLTSHTGTCTELIPSSLFYPPSSSVVKAREYQPSDFANLSQTKLTGKLTGSSSHGGFQDRKLLNLFV | 192 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 766859 | 767526 | - | Bpe017430.1 | Bpe05g00043 | 103820 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe05g00043 | 192 | MobiDBLite | consensus disorder prediction | 105 | 124 | - | - | |
Bpe05g00043 | 192 | ProSiteProfiles | LOB domain profile. | 1 | 107 | IPR004883 | - | |
Bpe05g00043 | 192 | Pfam | Lateral organ boundaries (LOB) domain | 2 | 101 | IPR004883 | - | |
Bpe05g00043 | 192 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 38 | 1 | 161 | - | - | |
Bpe05g00043 | 192 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 39-LIKE | 1 | 161 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bpe02g01778 | Bpe05g00043 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe02g01779 | Bpe-Chr2:20108402 | Bpe05g00043 | Bpe-Chr5:766859 | 4.22E-97 | dispersed | |
Bpe05g00043 | Bpe-Chr5:766859 | Bpe14g00112 | Bpe-Chr14:1585846 | 1.20E-47 | dispersed | |
Bpe13g00123 | Bpe-Chr13:7812815 | Bpe05g00043 | Bpe-Chr5:766859 | 4.48E-58 | transposed | |
Bpe02g01778 | Bpe-Chr2:20105653 | Bpe05g00043 | Bpe-Chr5:766859 | 1.76E-98 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
21404 | PF03195 | LOB | 1.80E-24 | No_clan | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe05g00043 | - | - | csv:101208953 | 222.631 |