Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe05g00048 ATGGAGGATGGCGATGTGACGGTGAGGCTTGGGGCTTTGAACATGAAGGTCGATCGTGTCGGGTTGGATATAGTTCCGGATGTATACGTTTCATCCCCGGTGACGAGGCAGAAAGCCGCCGCCGCTAAACAAATTATAGAGAATCACTACAAGAACCATCTTCAAGCTTTACACGATCGCAAAGAGAGACGCAGAGCACTTGAACAAAGAGCTCAAGAAGCTCGGGTGTCAACTGAGGAACAAGAAGAAATGATGAGGAATCTGGAACGTAGAGAAACTGAATATATGAGGCTGCAAAGACGCAAAGTCGGAATCGATGATTTCGAGCAGTTAACTGTTATTGGTAAAGGTGCATTTGGTGAGGTCAGGTTATGTCGTGCTTTAAGTACAGGAGAGATTTTTGCCATGAAGAAACTGAAGAAGTCAGAGATGCTTAGCCGAGGCCAGGTTGAGCATGTCCGATCGGAGAGAAACTTACTTGCAGAGGTCGATAGTCGGTGCATTGTGAAACTCTTTTATTCTTTTCAAGATGCCGAATTCCTGTACCTTATCATGGAATATTTACCTGGTGGTGACATTATGACATTGCTTATGAGGAAAGATATTCTTTCTGAGAATGTTGCACGATTTTACATTGCAGAGAGCATTCTAGCTATTCAGTCGATTCATATGCACAATTACATTCATAGATTTTGGTTTGTGTAA 705 43.12 MEDGDVTVRLGALNMKVDRVGLDIVPDVYVSSPVTRQKAAAAKQIIENHYKNHLQALHDRKERRRALEQRAQEARVSTEEQEEMMRNLERRETEYMRLQRRKVGIDDFEQLTVIGKGAFGEVRLCRALSTGEIFAMKKLKKSEMLSRGQVEHVRSERNLLAEVDSRCIVKLFYSFQDAEFLYLIMEYLPGGDIMTLLMRKDILSENVARFYIAESILAIQSIHMHNYIHRFWFV 234
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 873065 874925 + Bpe017435.1 Bpe05g00048 103825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe05g00048 234 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 5 230 - -
Bpe05g00048 234 PANTHER SERINE/THREONINE-PROTEIN KINASE 5 230 - -
Bpe05g00048 234 Gene3D Phosphorylase Kinase; domain 1 42 225 - -
Bpe05g00048 234 ProSiteProfiles Protein kinase domain profile. 108 234 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe05g00048 234 SUPERFAMILY Protein kinase-like (PK-like) 87 230 IPR011009 -
Bpe05g00048 234 ProSitePatterns Protein kinases ATP-binding region signature. 114 137 IPR017441 GO:0005524
Bpe05g00048 234 Coils Coil 64 101 - -
Bpe05g00048 234 SMART serkin_6 108 233 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe05g00048 234 Pfam Protein kinase domain 108 230 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe05g00048 Bpe-Chr5:873065 Bpe08g00532 Bpe-Chr8:3615119 1.06E-95 dispersed
Bpe05g00048 Bpe-Chr5:873065 Bpe10g00480 Bpe-Chr10:12055396 1.74E-96 transposed
Bpe05g00048 Bpe-Chr5:873065 Bpe06g00550 Bpe-Chr6:16532541 2.86E-96 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63343 PF00069 Pkinase 2.00E-26 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe05g00048 K08790 - rcu:8278864 385.571