Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe05g00067 ATGCCTTCTTCTAAAAATTGCAATCCTGATCAAATCGGGTCAGGTTCTAACTCGTCGGTGAATCAACCGGAATCGCTGGCTCACCGGCGGTTCACGAGGCAGAGGAAGCTCAGACATCTCAGTGACAACGACACAGGCATTCATTTCCACCATCATTCTCAGTCGACGCCGTCGTCGCCGGATTCGTTTAGAATACAGAGGTCAATGGTTGGTTGTTCGGAACGTTGGTCGTCGTTGGGAGTACCTCAGCCTTTGCCCCTTCCCGGATTCACTTCAAGCCGGAAAGCCGAGTCTCCGGCTTCGTATTCTAGCCCTGGCCATTACCCCTCCCCACAAGAAACTCCGGGACGGAAGAACCCGTGTCCAGTGATATTGAATTCAGCTAAAATTTTAGGAAACTGTCAAAAGAAAGTCCCGAGAGATGTAAACAGTGATGGTGTTGATGTTAATTGTGGGCAAACTCTTCCAATGTCAAGGTCGCCACCAATTACTGGATCGTCCGGAGGAACAGGTAGTCCAAGAGGATCGAGTAGAGATGATTTATTTCGGTCTTATGTTGATACAAGTTCTGCAGAATGTTCAAATAAATATGGTAGGAGATTCTTTCAAGAACTAAACGTCGAGAGAGGGGGTGAAAGATTAACTCTGAAAGTGTCTTCCAGGAGTACACCAACGAGTGTTTTGTCGAGTCCAGTTGTTAGCCCAAGGAGATCGAATACAGGAGATTTTTACGCGTCTTTTCTGGATCCTCAACAATTTAAAGATTTCCCTTCGTCTGGGGCGGCAAAAATATCGACGCCGAGAATTTCCTGTAGTCCTCCTGATCGTTCTCCTCCCCACAGCCCCACAGCTAAAAGCCCTCTTCATAGCACAAGATCTCCTAATGGAACCACCTTTGCTCTGCACCATAAACCATTTCAGGAAATTTCGATGGATAGGCCCGAAGATAATGGCCATGTGAATGCCTACCCATTGCCCCTTCCTCCCGTGCCTATCGTTTCATCCCAACCAACGATGAGTCATCATGTAATGGACAATCCATATGCTTCAATGATGAAAGATAAATGGCAGAAGGGAAAACTTATTGGGAGAGGAACGTTCGGGAGCGTTTATCTGGCGACCAACCGGGAGACCGGAGCTTTATGTGCAATGAAAGAAGTGGATCTCATTGCAGATGATCCTAAATCTGCCGAGTGTATAAAGCAATTAGAGCAGGAAATTAAAGTTCTTCACAAACTAAAACATCCAAATATTGTGCAGTACTATGGAAGTGAAAGAATAGATGATCATTTTTACATATATTTGGAGTATGTTTATCCGGGTTCGATTAATAAGTACATCCGAGAACATTGTGGAGCTATGACAGAATCCGTTGTTCGCAATTTTTCACGTCATATTCTCTCCGGGTTGGCTTACTTGCACAGCAAAAAGACCATACATAGGGATATTAAAGGTGCAAATTTACTCGTTGATGCCTTTGGGGTTGTCAAACTTGCAGATTTCGGAATGGCAAAGCATCTTGCAGGTCAATATGATCTTTCTTTGAAGGGCAGTCCTCACTGGATGGCACCGGAGGTCATAAAGGCTTCGATGCAAGGCAGAAACCCGGATCTTGCTTTTGCAGTGGATATATGGAGCTTGGGTTGTACAATAATTGAAATGCTTAATGGAAAACCTCCATGGAGTGAGTTTGAAGGGAACTTACCTAGTTTTCTCCCTTCCTATCAGCCTTCTGCTATGTTCAAGATCTTGAACAGAAACCCTCCTATACCAGAAACAATATCTTCAGAAGGGAAAGACTTCCTCCATTGTTGTTTTCGAAGAAATCCTGCCGAGAGGCCATCGGCTAATACGTTACTCGAGCATCCGTTTTTATGTCACCCGCACGATGAAAATGTTTCGTTCTCAACTCAAGCGTTATCTGCGATGAATCTACACGTAATTATCACTCCTGCGAGTATTTTTTTTTTTTAA 1974 44.43 MPSSKNCNPDQIGSGSNSSVNQPESLAHRRFTRQRKLRHLSDNDTGIHFHHHSQSTPSSPDSFRIQRSMVGCSERWSSLGVPQPLPLPGFTSSRKAESPASYSSPGHYPSPQETPGRKNPCPVILNSAKILGNCQKKVPRDVNSDGVDVNCGQTLPMSRSPPITGSSGGTGSPRGSSRDDLFRSYVDTSSAECSNKYGRRFFQELNVERGGERLTLKVSSRSTPTSVLSSPVVSPRRSNTGDFYASFLDPQQFKDFPSSGAAKISTPRISCSPPDRSPPHSPTAKSPLHSTRSPNGTTFALHHKPFQEISMDRPEDNGHVNAYPLPLPPVPIVSSQPTMSHHVMDNPYASMMKDKWQKGKLIGRGTFGSVYLATNRETGALCAMKEVDLIADDPKSAECIKQLEQEIKVLHKLKHPNIVQYYGSERIDDHFYIYLEYVYPGSINKYIREHCGAMTESVVRNFSRHILSGLAYLHSKKTIHRDIKGANLLVDAFGVVKLADFGMAKHLAGQYDLSLKGSPHWMAPEVIKASMQGRNPDLAFAVDIWSLGCTIIEMLNGKPPWSEFEGNLPSFLPSYQPSAMFKILNRNPPIPETISSEGKDFLHCCFRRNPAERPSANTLLEHPFLCHPHDENVSFSTQALSAMNLHVIITPASIFFF 657
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 1199237 1202359 - Bpe017456.1 Bpe05g00067 103844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe05g00067 657 SMART serkin_6 356 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe05g00067 657 MobiDBLite consensus disorder prediction 94 110 - -
Bpe05g00067 657 MobiDBLite consensus disorder prediction 1 27 - -
Bpe05g00067 657 MobiDBLite consensus disorder prediction 147 174 - -
Bpe05g00067 657 MobiDBLite consensus disorder prediction 138 180 - -
Bpe05g00067 657 MobiDBLite consensus disorder prediction 50 66 - -
Bpe05g00067 657 MobiDBLite consensus disorder prediction 283 299 - -
Bpe05g00067 657 MobiDBLite consensus disorder prediction 1 121 - -
Bpe05g00067 657 Pfam Protein kinase domain 357 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe05g00067 657 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 14 646 - -
Bpe05g00067 657 ProSiteProfiles Protein kinase domain profile. 356 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe05g00067 657 ProSitePatterns Protein kinases ATP-binding region signature. 362 385 IPR017441 GO:0005524
Bpe05g00067 657 SUPERFAMILY Protein kinase-like (PK-like) 351 635 IPR011009 -
Bpe05g00067 657 MobiDBLite consensus disorder prediction 256 299 - -
Bpe05g00067 657 Gene3D Transferase(Phosphotransferase) domain 1 348 652 - -
Bpe05g00067 657 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 14 646 - -
Bpe05g00067 657 MobiDBLite consensus disorder prediction 217 236 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe05g00067 Bpe-Chr5:1199237 Bpe12g00439 Bpe-Chr12:10156906 7.84E-107 dispersed
Bpe05g00067 Bpe-Chr5:1199237 Bpe02g00081 Bpe-Chr2:608986 8.07E-66 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63344 PF00069 Pkinase 1.60E-70 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe05g00067 - - zju:107420359 653.284